RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
LINC00939-203ENST00000545784 BCORL1Q5H9F3 1711 aa15.41■□□□□ 0.06
LINC00939-203ENST00000545784 EIF2AK4Q9P2K8 1649 aaKnown RBP15.4■□□□□ 0.06
LINC00939-203ENST00000545784 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
LINC00939-203ENST00000545784 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
LINC00939-203ENST00000545784 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
LINC00939-203ENST00000545784 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
LINC00939-203ENST00000545784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC00939-203ENST00000545784 GCC2Q8IWJ2 1684 aa15.35■□□□□ 0.05
LINC00939-203ENST00000545784 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
LINC00939-203ENST00000545784 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
LINC00939-203ENST00000545784 VWDEQ8N2E2 1590 aa15.34■□□□□ 0.05
LINC00939-203ENST00000545784 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.05
LINC00939-203ENST00000545784 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.05
LINC00939-203ENST00000545784 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.05
LINC00939-203ENST00000545784 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
LINC00939-203ENST00000545784 NUP155O75694 1391 aa15.32■□□□□ 0.04
LINC00939-203ENST00000545784 CNTLNQ9NXG0 1405 aa15.32■□□□□ 0.04
LINC00939-203ENST00000545784 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
LINC00939-203ENST00000545784 ABCC3O15438 1527 aa15.31■□□□□ 0.04
LINC00939-203ENST00000545784 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
LINC00939-203ENST00000545784 UNC13BO14795 1591 aa15.31■□□□□ 0.04
LINC00939-203ENST00000545784 KANK1Q14678 1352 aa15.31■□□□□ 0.04
LINC00939-203ENST00000545784 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
LINC00939-203ENST00000545784 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
LINC00939-203ENST00000545784 LMTK2Q8IWU2 1503 aa15.29■□□□□ 0.04
LINC00939-203ENST00000545784 PTPRMP28827 1452 aa15.29■□□□□ 0.04
LINC00939-203ENST00000545784 TRIM52Q96A61 297 aa15.28■□□□□ 0.04
LINC00939-203ENST00000545784 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.04
LINC00939-203ENST00000545784 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.03
LINC00939-203ENST00000545784 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
LINC00939-203ENST00000545784 CLTCQ00610 1675 aaKnown RBP15.26■□□□□ 0.03
LINC00939-203ENST00000545784 PZPP20742 1482 aa15.26■□□□□ 0.03
LINC00939-203ENST00000545784 RIMS1Q86UR5 1692 aaKnown RBP15.26■□□□□ 0.03
LINC00939-203ENST00000545784 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
LINC00939-203ENST00000545784 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
LINC00939-203ENST00000545784 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
LINC00939-203ENST00000545784 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
LINC00939-203ENST00000545784 NPATQ14207 1427 aa15.23■□□□□ 0.03
LINC00939-203ENST00000545784 MROH2AA6NES4 1674 aa15.23■□□□□ 0.03
LINC00939-203ENST00000545784 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
LINC00939-203ENST00000545784 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
LINC00939-203ENST00000545784 CEP152O94986 1710 aa15.22■□□□□ 0.03
LINC00939-203ENST00000545784 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
LINC00939-203ENST00000545784 EFCAB6Q5THR3 1501 aa15.21■□□□□ 0.03
LINC00939-203ENST00000545784 PKD2Q13563 968 aa15.21■□□□□ 0.03
LINC00939-203ENST00000545784 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
LINC00939-203ENST00000545784 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.02
LINC00939-203ENST00000545784 C3P01024 1663 aa15.21■□□□□ 0.02
LINC00939-203ENST00000545784 TET3O43151 1660 aa15.2■□□□□ 0.02
LINC00939-203ENST00000545784 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
LINC00939-203ENST00000545784 NOS1P29475 1434 aa15.18■□□□□ 0.02
LINC00939-203ENST00000545784 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
LINC00939-203ENST00000545784 FOXD1Q16676 465 aa15.17■□□□□ 0.02
LINC00939-203ENST00000545784 PTPRTO14522 1441 aa15.16■□□□□ 0.02
LINC00939-203ENST00000545784 TNRQ92752 1358 aa15.16■□□□□ 0.02
LINC00939-203ENST00000545784 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
LINC00939-203ENST00000545784 PLA2R1Q13018 1463 aa15.16■□□□□ 0.02
LINC00939-203ENST00000545784 E9PCH4 1651 aa15.15■□□□□ 0.02
LINC00939-203ENST00000545784 IDI1Q13907 227 aa15.13■□□□□ 0.01
LINC00939-203ENST00000545784 PREX1Q8TCU6 1659 aa15.12■□□□□ 0.01
LINC00939-203ENST00000545784 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
LINC00939-203ENST00000545784 SYNMO15061 1565 aa15.11■□□□□ 0.01
LINC00939-203ENST00000545784 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
LINC00939-203ENST00000545784 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
LINC00939-203ENST00000545784 DHX57Q6P158 1386 aaKnown RBP15.1■□□□□ 0.01
LINC00939-203ENST00000545784 CFAP65Q6ZU64 1925 aaKnown RBP15.1■□□□□ 0.01
LINC00939-203ENST00000545784 ANKRD30BQ9BXX2 1392 aa15.1■□□□□ 0.01
LINC00939-203ENST00000545784 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0.01
LINC00939-203ENST00000545784 NLRP1Q9C000 1473 aa15.08■□□□□ 0
LINC00939-203ENST00000545784 UHRF1BP1Q6BDS2 1440 aa15.07■□□□□ 0
LINC00939-203ENST00000545784 TRPM2O94759 1503 aa15.07■□□□□ 0
LINC00939-203ENST00000545784 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
LINC00939-203ENST00000545784 UGGT1Q9NYU2 1555 aa15.06■□□□□ 0
LINC00939-203ENST00000545784 LMTK3Q96Q04 1460 aa15.06■□□□□ 0
LINC00939-203ENST00000545784 PIK3C2BO00750 1634 aa15.05■□□□□ -0
LINC00939-203ENST00000545784 MYO3AQ8NEV4 1616 aa15.05■□□□□ -0
LINC00939-203ENST00000545784 SPHKAPQ2M3C7 1700 aa15.04■□□□□ -0
LINC00939-203ENST00000545784 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
LINC00939-203ENST00000545784 HSPA2P54652 639 aa15.02■□□□□ -0
LINC00939-203ENST00000545784 THEMISQ8N1K5 641 aaPredicted RBP15.02□□□□□ -0.01
LINC00939-203ENST00000545784 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
LINC00939-203ENST00000545784 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
LINC00939-203ENST00000545784 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
LINC00939-203ENST00000545784 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
LINC00939-203ENST00000545784 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
LINC00939-203ENST00000545784 TMEM131LA2VDJ0 1609 aa14.98□□□□□ -0.01
LINC00939-203ENST00000545784 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
LINC00939-203ENST00000545784 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
LINC00939-203ENST00000545784 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
LINC00939-203ENST00000545784 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
LINC00939-203ENST00000545784 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
LINC00939-203ENST00000545784 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
LINC00939-203ENST00000545784 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.01
LINC00939-203ENST00000545784 ARHGAP23Q9P227 1491 aa14.96□□□□□ -0.01
LINC00939-203ENST00000545784 LTKP29376 864 aa14.96□□□□□ -0.02
LINC00939-203ENST00000545784 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
LINC00939-203ENST00000545784 SLIT1O75093 1534 aa14.95□□□□□ -0.02
LINC00939-203ENST00000545784 ZFYVE9O95405 1425 aa14.94□□□□□ -0.02
LINC00939-203ENST00000545784 NCKAP5LQ9HCH0 1330 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms