RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 FAM135AQ9P2D6 1515 aa26.17■■□□□ 1.78
MSLN-202ENST00000545450 CFAP74Q9C0B2 1584 aa26.17■■□□□ 1.78
MSLN-202ENST00000545450 ATP7AQ04656 1500 aa26.15■■□□□ 1.78
MSLN-202ENST00000545450 TEX14Q8IWB6 1497 aa26.12■■□□□ 1.77
MSLN-202ENST00000545450 IQGAP3Q86VI3 1631 aa26.12■■□□□ 1.77
MSLN-202ENST00000545450 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
MSLN-202ENST00000545450 MAP3K4Q9Y6R4 1608 aa26.09■■□□□ 1.77
MSLN-202ENST00000545450 L3MBTL2Q969R5 705 aa26.09■■□□□ 1.77
MSLN-202ENST00000545450 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
MSLN-202ENST00000545450 ZNF518AQ6AHZ1 1483 aa26.07■■□□□ 1.76
MSLN-202ENST00000545450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.06■■□□□ 1.76
MSLN-202ENST00000545450 GLI2P10070 1586 aa26.04■■□□□ 1.76
MSLN-202ENST00000545450 KDM5CP41229 1560 aa26.03■■□□□ 1.76
MSLN-202ENST00000545450 POGZQ7Z3K3 1410 aa26.03■■□□□ 1.76
MSLN-202ENST00000545450 NEO1Q92859 1461 aa26.02■■□□□ 1.76
MSLN-202ENST00000545450 DEPDC5O75140 1603 aa26.02■■□□□ 1.76
MSLN-202ENST00000545450 DIP2BQ9P265 1576 aa26■■□□□ 1.75
MSLN-202ENST00000545450 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
MSLN-202ENST00000545450 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
MSLN-202ENST00000545450 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
MSLN-202ENST00000545450 BCL11AQ9H165 835 aa25.96■■□□□ 1.75
MSLN-202ENST00000545450 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.74
MSLN-202ENST00000545450 PLA2R1Q13018 1463 aa25.93■■□□□ 1.74
MSLN-202ENST00000545450 MLH3Q9UHC1 1453 aa25.93■■□□□ 1.74
MSLN-202ENST00000545450 HNRNPUQ00839 825 aaKnown RBP eCLIP25.93■■□□□ 1.74
MSLN-202ENST00000545450 NBPF8Q3BBV2 869 aa25.93■■□□□ 1.74
MSLN-202ENST00000545450 RICTORQ6R327 1708 aa25.92■■□□□ 1.74
MSLN-202ENST00000545450 MROH1Q8NDA8 1641 aa25.91■■□□□ 1.74
MSLN-202ENST00000545450 E9PCH4 1651 aa25.91■■□□□ 1.74
MSLN-202ENST00000545450 MSH5O43196 834 aa25.9■■□□□ 1.74
MSLN-202ENST00000545450 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
MSLN-202ENST00000545450 VWDEQ8N2E2 1590 aa25.9■■□□□ 1.74
MSLN-202ENST00000545450 ABCA6Q8N139 1617 aa25.9■■□□□ 1.74
MSLN-202ENST00000545450 TSPOAP1O95153 1857 aa25.89■■□□□ 1.74
MSLN-202ENST00000545450 FANCIQ9NVI1 1328 aa25.89■■□□□ 1.74
MSLN-202ENST00000545450 PRDM15P57071 1507 aaPredicted RBP25.89■■□□□ 1.73
MSLN-202ENST00000545450 PPRC1Q5VV67 1664 aaKnown RBP25.88■■□□□ 1.73
MSLN-202ENST00000545450 A2MP01023 1474 aa25.88■■□□□ 1.73
MSLN-202ENST00000545450 FRMPD1Q5SYB0 1578 aa25.88■■□□□ 1.73
MSLN-202ENST00000545450 KIF3BO15066 747 aa25.88■■□□□ 1.73
MSLN-202ENST00000545450 RAPGEF3O95398 923 aa25.88■■□□□ 1.73
MSLN-202ENST00000545450 CCDC144AA2RUR9 1427 aa25.87■■□□□ 1.73
MSLN-202ENST00000545450 ERICH6BQ5W0A0 696 aa25.86■■□□□ 1.73
MSLN-202ENST00000545450 WASHC2AQ641Q2 1341 aa25.86■■□□□ 1.73
MSLN-202ENST00000545450 TET3O43151 1660 aa25.86■■□□□ 1.73
MSLN-202ENST00000545450 ATP10AO60312 1499 aa25.86■■□□□ 1.73
MSLN-202ENST00000545450 RNF17Q9BXT8 1623 aaKnown RBP25.83■■□□□ 1.73
MSLN-202ENST00000545450 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
MSLN-202ENST00000545450 KIF13AQ9H1H9 1805 aa25.82■■□□□ 1.72
MSLN-202ENST00000545450 KANK1Q14678 1352 aa25.81■■□□□ 1.72
MSLN-202ENST00000545450 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
MSLN-202ENST00000545450 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
MSLN-202ENST00000545450 BCORL1Q5H9F3 1711 aa25.79■■□□□ 1.72
MSLN-202ENST00000545450 UHRF1BP1Q6BDS2 1440 aa25.79■■□□□ 1.72
MSLN-202ENST00000545450 CEP152O94986 1710 aa25.78■■□□□ 1.72
MSLN-202ENST00000545450 IRX6P78412 446 aaPredicted RBP25.77■■□□□ 1.72
MSLN-202ENST00000545450 EIF4G2P78344 907 aaKnown RBP eCLIP25.76■■□□□ 1.71
MSLN-202ENST00000545450 TRPM2O94759 1503 aa25.76■■□□□ 1.71
MSLN-202ENST00000545450 CNTLNQ9NXG0 1405 aa25.75■■□□□ 1.71
MSLN-202ENST00000545450 ZNF326Q5BKZ1 582 aaKnown RBP25.75■■□□□ 1.71
MSLN-202ENST00000545450 PTPRTO14522 1441 aa25.73■■□□□ 1.71
MSLN-202ENST00000545450 EFCAB6Q5THR3 1501 aa25.73■■□□□ 1.71
MSLN-202ENST00000545450 DCAF11Q8TEB1 546 aa25.73■■□□□ 1.71
MSLN-202ENST00000545450 PPP4R2Q9NY27 417 aa25.73■■□□□ 1.71
MSLN-202ENST00000545450 YEATS2Q9ULM3 1422 aa25.72■■□□□ 1.71
MSLN-202ENST00000545450 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
MSLN-202ENST00000545450 LMTK2Q8IWU2 1503 aa25.72■■□□□ 1.71
MSLN-202ENST00000545450 CLTCL1P53675 1640 aa25.71■■□□□ 1.71
MSLN-202ENST00000545450 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
MSLN-202ENST00000545450 RALGAPBQ86X10 1494 aa25.71■■□□□ 1.71
MSLN-202ENST00000545450 SPATA31E1Q6ZUB1 1445 aa25.7■■□□□ 1.7
MSLN-202ENST00000545450 RGL3Q3MIN7 710 aa25.69■■□□□ 1.7
MSLN-202ENST00000545450 CCDC184Q52MB2 194 aa25.69■■□□□ 1.7
MSLN-202ENST00000545450 PRKRIP1Q9H875 184 aaPredicted RBP25.66■■□□□ 1.7
MSLN-202ENST00000545450 GGT6Q6P531 493 aa25.65■■□□□ 1.7
MSLN-202ENST00000545450 PRAG1Q86YV5 1406 aa25.64■■□□□ 1.7
MSLN-202ENST00000545450 TRPM1Q7Z4N2 1603 aa25.64■■□□□ 1.7
MSLN-202ENST00000545450 CCDC7Q96M83 1385 aa25.64■■□□□ 1.7
MSLN-202ENST00000545450 C11orf95C9JLR9 678 aaPredicted RBP25.62■■□□□ 1.69
MSLN-202ENST00000545450 ABCC3O15438 1527 aa25.62■■□□□ 1.69
MSLN-202ENST00000545450 POLR1AO95602 1720 aaPredicted RBP25.62■■□□□ 1.69
MSLN-202ENST00000545450 ZBED9Q6R2W3 1325 aa25.62■■□□□ 1.69
MSLN-202ENST00000545450 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
MSLN-202ENST00000545450 USP47Q96K76 1375 aa25.61■■□□□ 1.69
MSLN-202ENST00000545450 UGGT1Q9NYU2 1555 aa25.61■■□□□ 1.69
MSLN-202ENST00000545450 ERICH6Q7L0X2 663 aa25.59■■□□□ 1.69
MSLN-202ENST00000545450 CAMSAP1Q5T5Y3 1602 aa25.59■■□□□ 1.69
MSLN-202ENST00000545450 NPATQ14207 1427 aa25.57■■□□□ 1.68
MSLN-202ENST00000545450 KIF1BO60333 1816 aa25.56■■□□□ 1.68
MSLN-202ENST00000545450 COL17A1Q9UMD9 1497 aaPredicted RBP25.56■■□□□ 1.68
MSLN-202ENST00000545450 MRS2Q9HD23 443 aa25.56■■□□□ 1.68
MSLN-202ENST00000545450 WASHC2CQ9Y4E1 1318 aa25.55■■□□□ 1.68
MSLN-202ENST00000545450 FAM9BQ8IZU0 186 aa25.55■■□□□ 1.68
MSLN-202ENST00000545450 CARD11Q9BXL7 1154 aa25.55■■□□□ 1.68
MSLN-202ENST00000545450 ZC3H13Q5T200 1668 aaKnown RBP25.54■■□□□ 1.68
MSLN-202ENST00000545450 ROCK2O75116 1388 aaKnown RBP25.54■■□□□ 1.68
MSLN-202ENST00000545450 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
MSLN-202ENST00000545450 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
MSLN-202ENST00000545450 MROH2AA6NES4 1674 aa25.52■■□□□ 1.68
MSLN-202ENST00000545450 MADDQ8WXG6 1647 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms