RNA–Protein interactions for RNA: ENST00000545276.1

LINC02440-201, Transcript of long intergenic non-protein coding RNA 2440, humanhuman

TSL 2 BASIC

Gene LINC02440, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02440-201ENST00000545276 ZMYM3Q14202 1370 aa22.04■■□□□ 1.12
LINC02440-201ENST00000545276 KIF3BO15066 747 aa22.03■■□□□ 1.12
LINC02440-201ENST00000545276 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
LINC02440-201ENST00000545276 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
LINC02440-201ENST00000545276 MROH1Q8NDA8 1641 aa21.98■■□□□ 1.11
LINC02440-201ENST00000545276 MYO3AQ8NEV4 1616 aa21.98■■□□□ 1.11
LINC02440-201ENST00000545276 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
LINC02440-201ENST00000545276 HSPA2P54652 639 aa21.97■■□□□ 1.11
LINC02440-201ENST00000545276 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
LINC02440-201ENST00000545276 PTPRKQ15262 1439 aa21.97■■□□□ 1.11
LINC02440-201ENST00000545276 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
LINC02440-201ENST00000545276 ANKRD30AQ9BXX3 1397 aa21.94■■□□□ 1.1
LINC02440-201ENST00000545276 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
LINC02440-201ENST00000545276 ABCC3O15438 1527 aa21.93■■□□□ 1.1
LINC02440-201ENST00000545276 DEPDC5O75140 1603 aa21.93■■□□□ 1.1
LINC02440-201ENST00000545276 PZPP20742 1482 aa21.93■■□□□ 1.1
LINC02440-201ENST00000545276 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
LINC02440-201ENST00000545276 CEP152O94986 1710 aa21.92■■□□□ 1.1
LINC02440-201ENST00000545276 WASHC2CQ9Y4E1 1318 aa21.91■■□□□ 1.1
LINC02440-201ENST00000545276 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
LINC02440-201ENST00000545276 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
LINC02440-201ENST00000545276 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
LINC02440-201ENST00000545276 CAMSAP1Q5T5Y3 1602 aa21.89■■□□□ 1.09
LINC02440-201ENST00000545276 RRP7BPQ9NSQ0 103 aa21.89■■□□□ 1.09
LINC02440-201ENST00000545276 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
LINC02440-201ENST00000545276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.86■■□□□ 1.09
LINC02440-201ENST00000545276 TNRQ92752 1358 aa21.83■■□□□ 1.08
LINC02440-201ENST00000545276 A2ML1A8K2U0 1454 aa21.83■■□□□ 1.08
LINC02440-201ENST00000545276 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
LINC02440-201ENST00000545276 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
LINC02440-201ENST00000545276 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
LINC02440-201ENST00000545276 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
LINC02440-201ENST00000545276 ROCK1Q13464 1354 aa21.79■■□□□ 1.08
LINC02440-201ENST00000545276 LMTK2Q8IWU2 1503 aa21.79■■□□□ 1.08
LINC02440-201ENST00000545276 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
LINC02440-201ENST00000545276 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
LINC02440-201ENST00000545276 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
LINC02440-201ENST00000545276 KANK1Q14678 1352 aa21.78■■□□□ 1.08
LINC02440-201ENST00000545276 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
LINC02440-201ENST00000545276 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
LINC02440-201ENST00000545276 ARHGAP31Q2M1Z3 1444 aa21.78■■□□□ 1.08
LINC02440-201ENST00000545276 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
LINC02440-201ENST00000545276 PTPRTO14522 1441 aa21.76■■□□□ 1.07
LINC02440-201ENST00000545276 CFAP65Q6ZU64 1925 aaKnown RBP21.74■■□□□ 1.07
LINC02440-201ENST00000545276 UNC13BO14795 1591 aa21.74■■□□□ 1.07
LINC02440-201ENST00000545276 POLR1AO95602 1720 aaPredicted RBP21.73■■□□□ 1.07
LINC02440-201ENST00000545276 EFCAB6Q5THR3 1501 aa21.73■■□□□ 1.07
LINC02440-201ENST00000545276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
LINC02440-201ENST00000545276 UGGT1Q9NYU2 1555 aa21.72■■□□□ 1.07
LINC02440-201ENST00000545276 TET3O43151 1660 aa21.69■■□□□ 1.06
LINC02440-201ENST00000545276 PKD2Q13563 968 aa21.68■■□□□ 1.06
LINC02440-201ENST00000545276 GCC2Q8IWJ2 1684 aa21.68■■□□□ 1.06
LINC02440-201ENST00000545276 UBR1Q8IWV7 1749 aa21.67■■□□□ 1.06
LINC02440-201ENST00000545276 ITGAEP38570 1179 aa21.66■■□□□ 1.06
LINC02440-201ENST00000545276 IQGAP3Q86VI3 1631 aa21.65■■□□□ 1.06
LINC02440-201ENST00000545276 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
LINC02440-201ENST00000545276 RPRD2Q5VT52 1461 aaKnown RBP21.64■■□□□ 1.06
LINC02440-201ENST00000545276 NCKAP5LQ9HCH0 1330 aa21.64■■□□□ 1.05
LINC02440-201ENST00000545276 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
LINC02440-201ENST00000545276 THEMISQ8N1K5 641 aaPredicted RBP21.63■■□□□ 1.05
LINC02440-201ENST00000545276 SYNMO15061 1565 aa21.62■■□□□ 1.05
LINC02440-201ENST00000545276 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
LINC02440-201ENST00000545276 ILDR1Q86SU0 546 aaPredicted RBP21.6■■□□□ 1.05
LINC02440-201ENST00000545276 NOS1P29475 1434 aa21.6■■□□□ 1.05
LINC02440-201ENST00000545276 LTBP4Q8N2S1 1624 aa21.58■■□□□ 1.05
LINC02440-201ENST00000545276 E9PCH4 1651 aa21.58■■□□□ 1.05
LINC02440-201ENST00000545276 MED14O60244 1454 aa21.57■■□□□ 1.04
LINC02440-201ENST00000545276 CERKQ8TCT0 537 aa21.56■■□□□ 1.04
LINC02440-201ENST00000545276 FBXO41Q8TF61 875 aa21.56■■□□□ 1.04
LINC02440-201ENST00000545276 IQGAP1P46940 1657 aa21.56■■□□□ 1.04
LINC02440-201ENST00000545276 SLIT1O75093 1534 aa21.55■■□□□ 1.04
LINC02440-201ENST00000545276 ANKLE2Q86XL3 938 aa21.55■■□□□ 1.04
LINC02440-201ENST00000545276 ARHGAP23Q9P227 1491 aa21.55■■□□□ 1.04
LINC02440-201ENST00000545276 NAIPQ13075 1403 aa21.55■■□□□ 1.04
LINC02440-201ENST00000545276 ADGRB3O60242 1522 aa21.54■■□□□ 1.04
LINC02440-201ENST00000545276 NUP155O75694 1391 aa21.52■■□□□ 1.04
LINC02440-201ENST00000545276 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
LINC02440-201ENST00000545276 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
LINC02440-201ENST00000545276 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.03
LINC02440-201ENST00000545276 SCAF11Q99590 1463 aaKnown RBP21.51■■□□□ 1.03
LINC02440-201ENST00000545276 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
LINC02440-201ENST00000545276 ZNF335Q9H4Z2 1342 aaPredicted RBP21.49■■□□□ 1.03
LINC02440-201ENST00000545276 IDI1Q13907 227 aa21.48■■□□□ 1.03
LINC02440-201ENST00000545276 MYO5BQ9ULV0 1848 aa21.47■■□□□ 1.03
LINC02440-201ENST00000545276 TMEM2Q9UHN6 1383 aa21.47■■□□□ 1.03
LINC02440-201ENST00000545276 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
LINC02440-201ENST00000545276 TMEM131LA2VDJ0 1609 aa21.45■■□□□ 1.02
LINC02440-201ENST00000545276 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
LINC02440-201ENST00000545276 CPS1P31327 1500 aa21.44■■□□□ 1.02
LINC02440-201ENST00000545276 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
LINC02440-201ENST00000545276 LTKP29376 864 aa21.4■■□□□ 1.02
LINC02440-201ENST00000545276 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
LINC02440-201ENST00000545276 STRCP1A6NGW2 1772 aa21.37■■□□□ 1.01
LINC02440-201ENST00000545276 ZFYVE9O95405 1425 aa21.37■■□□□ 1.01
LINC02440-201ENST00000545276 TRPM2O94759 1503 aa21.36■■□□□ 1.01
LINC02440-201ENST00000545276 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
LINC02440-201ENST00000545276 CLTCL1P53675 1640 aa21.32■■□□□ 1
LINC02440-201ENST00000545276 TRIM52Q96A61 297 aa21.3■■□□□ 1
LINC02440-201ENST00000545276 KIF1BO60333 1816 aa21.29■■□□□ 1
LINC02440-201ENST00000545276 PLEKHG1Q9ULL1 1385 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms