RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 GGT6Q6P531 493 aa25.73■■□□□ 1.71
PDCD2-213ENST00000544866 MROH1Q8NDA8 1641 aa25.73■■□□□ 1.71
PDCD2-213ENST00000544866 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
PDCD2-213ENST00000544866 ROCK1Q13464 1354 aa25.7■■□□□ 1.71
PDCD2-213ENST00000544866 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
PDCD2-213ENST00000544866 PPP6R1Q9UPN7 881 aa25.69■■□□□ 1.7
PDCD2-213ENST00000544866 DEPDC5O75140 1603 aa25.69■■□□□ 1.7
PDCD2-213ENST00000544866 ITGAEP38570 1179 aa25.68■■□□□ 1.7
PDCD2-213ENST00000544866 ESF1Q9H501 851 aaKnown RBP25.67■■□□□ 1.7
PDCD2-213ENST00000544866 KDM5DQ9BY66 1539 aa25.67■■□□□ 1.7
PDCD2-213ENST00000544866 PRDM15P57071 1507 aaPredicted RBP25.65■■□□□ 1.7
PDCD2-213ENST00000544866 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.7
PDCD2-213ENST00000544866 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.69
PDCD2-213ENST00000544866 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
PDCD2-213ENST00000544866 CEP152O94986 1710 aa25.63■■□□□ 1.69
PDCD2-213ENST00000544866 ANKRD50Q9ULJ7 1429 aa25.63■■□□□ 1.69
PDCD2-213ENST00000544866 ZMYM3Q14202 1370 aa25.62■■□□□ 1.69
PDCD2-213ENST00000544866 ABCC3O15438 1527 aa25.62■■□□□ 1.69
PDCD2-213ENST00000544866 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
PDCD2-213ENST00000544866 PREX1Q8TCU6 1659 aa25.58■■□□□ 1.68
PDCD2-213ENST00000544866 GCC2Q8IWJ2 1684 aa25.57■■□□□ 1.68
PDCD2-213ENST00000544866 WASHC2CQ9Y4E1 1318 aa25.57■■□□□ 1.68
PDCD2-213ENST00000544866 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
PDCD2-213ENST00000544866 CAMSAP1Q5T5Y3 1602 aa25.55■■□□□ 1.68
PDCD2-213ENST00000544866 UNC13BO14795 1591 aa25.55■■□□□ 1.68
PDCD2-213ENST00000544866 NPATQ14207 1427 aa25.54■■□□□ 1.68
PDCD2-213ENST00000544866 PZPP20742 1482 aa25.53■■□□□ 1.68
PDCD2-213ENST00000544866 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
PDCD2-213ENST00000544866 NAIPQ13075 1403 aa25.51■■□□□ 1.67
PDCD2-213ENST00000544866 LMTK2Q8IWU2 1503 aa25.5■■□□□ 1.67
PDCD2-213ENST00000544866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.5■■□□□ 1.67
PDCD2-213ENST00000544866 KANK1Q14678 1352 aa25.49■■□□□ 1.67
PDCD2-213ENST00000544866 CFAP65Q6ZU64 1925 aaKnown RBP25.48■■□□□ 1.67
PDCD2-213ENST00000544866 HFM1A2PYH4 1435 aa25.47■■□□□ 1.67
PDCD2-213ENST00000544866 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
PDCD2-213ENST00000544866 UHRF1BP1Q6BDS2 1440 aa25.45■■□□□ 1.66
PDCD2-213ENST00000544866 IQGAP3Q86VI3 1631 aa25.45■■□□□ 1.66
PDCD2-213ENST00000544866 ARHGAP31Q2M1Z3 1444 aa25.44■■□□□ 1.66
PDCD2-213ENST00000544866 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
PDCD2-213ENST00000544866 SPATA31D1Q6ZQQ2 1576 aa25.43■■□□□ 1.66
PDCD2-213ENST00000544866 EFCAB6Q5THR3 1501 aa25.42■■□□□ 1.66
PDCD2-213ENST00000544866 TET3O43151 1660 aa25.42■■□□□ 1.66
PDCD2-213ENST00000544866 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
PDCD2-213ENST00000544866 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
PDCD2-213ENST00000544866 TNRQ92752 1358 aa25.38■■□□□ 1.65
PDCD2-213ENST00000544866 CEP170BQ9Y4F5 1589 aaPredicted RBP25.37■■□□□ 1.65
PDCD2-213ENST00000544866 HSPA2P54652 639 aa25.35■■□□□ 1.65
PDCD2-213ENST00000544866 NUP155O75694 1391 aa25.34■■□□□ 1.65
PDCD2-213ENST00000544866 E9PCH4 1651 aa25.34■■□□□ 1.65
PDCD2-213ENST00000544866 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
PDCD2-213ENST00000544866 RPRD2Q5VT52 1461 aaKnown RBP25.31■■□□□ 1.64
PDCD2-213ENST00000544866 NLRP1Q9C000 1473 aa25.31■■□□□ 1.64
PDCD2-213ENST00000544866 SYNMO15061 1565 aa25.3■■□□□ 1.64
PDCD2-213ENST00000544866 NOS1P29475 1434 aa25.29■■□□□ 1.64
PDCD2-213ENST00000544866 STRCQ7RTU9 1775 aa25.27■■□□□ 1.64
PDCD2-213ENST00000544866 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
PDCD2-213ENST00000544866 UBR1Q8IWV7 1749 aa25.23■■□□□ 1.63
PDCD2-213ENST00000544866 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
PDCD2-213ENST00000544866 UGGT1Q9NYU2 1555 aa25.22■■□□□ 1.63
PDCD2-213ENST00000544866 PLA2R1Q13018 1463 aa25.2■■□□□ 1.62
PDCD2-213ENST00000544866 SPHKAPQ2M3C7 1700 aa25.2■■□□□ 1.62
PDCD2-213ENST00000544866 TRIM52Q96A61 297 aa25.19■■□□□ 1.62
PDCD2-213ENST00000544866 KDM5AP29375 1690 aaKnown RBP25.18■■□□□ 1.62
PDCD2-213ENST00000544866 RAB3GAP2Q9H2M9 1393 aa25.18■■□□□ 1.62
PDCD2-213ENST00000544866 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
PDCD2-213ENST00000544866 PTPRTO14522 1441 aa25.13■■□□□ 1.61
PDCD2-213ENST00000544866 IDI1Q13907 227 aa25.13■■□□□ 1.61
PDCD2-213ENST00000544866 ADGRB3O60242 1522 aa25.12■■□□□ 1.61
PDCD2-213ENST00000544866 MYO5BQ9ULV0 1848 aa25.12■■□□□ 1.61
PDCD2-213ENST00000544866 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
PDCD2-213ENST00000544866 THEMISQ8N1K5 641 aaPredicted RBP25.11■■□□□ 1.61
PDCD2-213ENST00000544866 SLC4A1APQ9BWU0 796 aaKnown RBP25.11■■□□□ 1.61
PDCD2-213ENST00000544866 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
PDCD2-213ENST00000544866 TRPM2O94759 1503 aa25.09■■□□□ 1.61
PDCD2-213ENST00000544866 PKD2Q13563 968 aa25.09■■□□□ 1.61
PDCD2-213ENST00000544866 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
PDCD2-213ENST00000544866 TMEM131LA2VDJ0 1609 aa25.08■■□□□ 1.61
PDCD2-213ENST00000544866 SLIT1O75093 1534 aa25.08■■□□□ 1.61
PDCD2-213ENST00000544866 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.6
PDCD2-213ENST00000544866 ARHGAP23Q9P227 1491 aa25.08■■□□□ 1.6
PDCD2-213ENST00000544866 CLTCL1P53675 1640 aa25.05■■□□□ 1.6
PDCD2-213ENST00000544866 HRCP23327 699 aa25.05■■□□□ 1.6
PDCD2-213ENST00000544866 MPHOSPH9Q99550 1183 aa25.05■■□□□ 1.6
PDCD2-213ENST00000544866 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
PDCD2-213ENST00000544866 TMEM2Q9UHN6 1383 aa25.02■■□□□ 1.6
PDCD2-213ENST00000544866 STAG3Q9UJ98 1225 aa25.01■■□□□ 1.59
PDCD2-213ENST00000544866 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
PDCD2-213ENST00000544866 MED14O60244 1454 aa25■■□□□ 1.59
PDCD2-213ENST00000544866 KIF1BO60333 1816 aa24.99■■□□□ 1.59
PDCD2-213ENST00000544866 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
PDCD2-213ENST00000544866 FOXD1Q16676 465 aa24.99■■□□□ 1.59
PDCD2-213ENST00000544866 SCAF11Q99590 1463 aaKnown RBP24.98■■□□□ 1.59
PDCD2-213ENST00000544866 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
PDCD2-213ENST00000544866 LTKP29376 864 aa24.96■■□□□ 1.59
PDCD2-213ENST00000544866 ZFYVE9O95405 1425 aa24.95■■□□□ 1.59
PDCD2-213ENST00000544866 NPHP4O75161 1426 aaPredicted RBP24.95■■□□□ 1.58
PDCD2-213ENST00000544866 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
PDCD2-213ENST00000544866 TXNDC2Q86VQ3 553 aa24.92■■□□□ 1.58
PDCD2-213ENST00000544866 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
PDCD2-213ENST00000544866 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms