RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C14orf37Q86TY3 774 aa7.53□□□□□ -1.2
SCFD1-207ENST00000544052 IL27Q8NEV9 243 aa7.53□□□□□ -1.2
SCFD1-207ENST00000544052 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
SCFD1-207ENST00000544052 PTGER2P43116 358 aa7.52□□□□□ -1.21
SCFD1-207ENST00000544052 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
SCFD1-207ENST00000544052 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
SCFD1-207ENST00000544052 PCDHGA4Q9Y5G9 962 aa7.51□□□□□ -1.21
SCFD1-207ENST00000544052 EVI5O60447 810 aa7.51□□□□□ -1.21
SCFD1-207ENST00000544052 NUDT7P0C024 238 aa7.51□□□□□ -1.21
SCFD1-207ENST00000544052 FECHP22830 423 aa7.51□□□□□ -1.21
SCFD1-207ENST00000544052 TBC1D12O60347 775 aa7.5□□□□□ -1.21
SCFD1-207ENST00000544052 ERICH6Q7L0X2 663 aa7.49□□□□□ -1.21
SCFD1-207ENST00000544052 PBX2P40425 430 aa7.48□□□□□ -1.21
SCFD1-207ENST00000544052 ANKRD13DQ6ZTN6 518 aa7.48□□□□□ -1.21
SCFD1-207ENST00000544052 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-207ENST00000544052 CCDC102AQ96A19 550 aa7.48□□□□□ -1.21
SCFD1-207ENST00000544052 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
SCFD1-207ENST00000544052 IRF6O14896 467 aa7.47□□□□□ -1.21
SCFD1-207ENST00000544052 GNPATO15228 680 aa7.47□□□□□ -1.21
SCFD1-207ENST00000544052 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.213e-6■□□□□ 10
SCFD1-207ENST00000544052 MAP2K5Q13163 448 aa7.47□□□□□ -1.21
SCFD1-207ENST00000544052 PTCD2Q8WV60 388 aaKnown RBP7.47□□□□□ -1.21
SCFD1-207ENST00000544052 FAM117AQ9C073 453 aa7.46□□□□□ -1.22
SCFD1-207ENST00000544052 HIC1Q14526 733 aa7.45□□□□□ -1.22
SCFD1-207ENST00000544052 FCHSD2O94868 740 aa7.45□□□□□ -1.22
SCFD1-207ENST00000544052 PTGDRQ13258 359 aa7.45□□□□□ -1.22
SCFD1-207ENST00000544052 PSDA5PKW4 1024 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-207ENST00000544052 ANO8Q9HCE9 1232 aaPredicted RBP7.43□□□□□ -1.22
SCFD1-207ENST00000544052 PARP9Q8IXQ6 854 aa7.42□□□□□ -1.22
SCFD1-207ENST00000544052 CDHR5Q9HBB8 845 aa7.42□□□□□ -1.22
SCFD1-207ENST00000544052 AMHR2Q16671 573 aa7.41□□□□□ -1.22
SCFD1-207ENST00000544052 POTEEQ6S8J3 1075 aa7.41□□□□□ -1.22
SCFD1-207ENST00000544052 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-207ENST00000544052 AXIN2Q9Y2T1 843 aa7.41□□□□□ -1.22
SCFD1-207ENST00000544052 KDM4FA0A1W2PPD8 638 aa7.4□□□□□ -1.22
SCFD1-207ENST00000544052 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.22
SCFD1-207ENST00000544052 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.23
SCFD1-207ENST00000544052 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
SCFD1-207ENST00000544052 MAP3K7O43318 606 aa7.39□□□□□ -1.23
SCFD1-207ENST00000544052 EN1Q05925 392 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-207ENST00000544052 TSR1Q2NL82 804 aaKnown RBP7.39□□□□□ -1.23
SCFD1-207ENST00000544052 PCDHGA10Q9Y5H3 936 aa7.39□□□□□ -1.23
SCFD1-207ENST00000544052 TTLL12Q14166 644 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-207ENST00000544052 PHF14O94880 888 aa7.38□□□□□ -1.23
SCFD1-207ENST00000544052 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
SCFD1-207ENST00000544052 DAXXQ9UER7 740 aaPredicted RBP7.38□□□□□ -1.23
SCFD1-207ENST00000544052 SUPT5HO00267 1087 aaKnown RBP7.37□□□□□ -1.23
SCFD1-207ENST00000544052 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
SCFD1-207ENST00000544052 ADGRD1Q6QNK2 874 aa7.36□□□□□ -1.23
SCFD1-207ENST00000544052 EPAS1Q99814 870 aa7.36□□□□□ -1.23
SCFD1-207ENST00000544052 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
SCFD1-207ENST00000544052 GIGYF2Q6Y7W6 1299 aaKnown RBP7.35□□□□□ -1.23
SCFD1-207ENST00000544052 PHOX2BQ99453 314 aa7.35□□□□□ -1.23
SCFD1-207ENST00000544052 TK2O00142 265 aa7.34□□□□□ -1.23
SCFD1-207ENST00000544052 MS4A1P11836 297 aa7.34□□□□□ -1.23
SCFD1-207ENST00000544052 FAM161AQ3B820 660 aa7.34□□□□□ -1.23
SCFD1-207ENST00000544052 TYW1BQ6NUM6 668 aa7.33□□□□□ -1.24
SCFD1-207ENST00000544052 PSEN2P49810 448 aa7.32□□□□□ -1.24
SCFD1-207ENST00000544052 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
SCFD1-207ENST00000544052 KCNH8Q96L42 1107 aa7.32□□□□□ -1.24
SCFD1-207ENST00000544052 NLRP7Q8WX94 980 aa7.31□□□□□ -1.24
SCFD1-207ENST00000544052 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
SCFD1-207ENST00000544052 FOSBP53539 338 aa7.31□□□□□ -1.24
SCFD1-207ENST00000544052 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-207ENST00000544052 HCSTQ9UBK5 93 aa7.31□□□□□ -1.24
SCFD1-207ENST00000544052 C6orf132Q5T0Z8 1188 aa7.3□□□□□ -1.24
SCFD1-207ENST00000544052 FBXW7Q969H0 707 aa7.3□□□□□ -1.24
SCFD1-207ENST00000544052 HRO43593 1189 aa7.29□□□□□ -1.24
SCFD1-207ENST00000544052 ZNF454Q8N9F8 522 aa7.29□□□□□ -1.24
SCFD1-207ENST00000544052 PADI6Q6TGC4 694 aa7.29□□□□□ -1.24
SCFD1-207ENST00000544052 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
SCFD1-207ENST00000544052 TMUB1Q9BVT8 246 aa7.29□□□□□ -1.24
SCFD1-207ENST00000544052 ARXQ96QS3 562 aa7.28□□□□□ -1.24
SCFD1-207ENST00000544052 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
SCFD1-207ENST00000544052 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
SCFD1-207ENST00000544052 STAC3Q96MF2 364 aa7.28□□□□□ -1.24
SCFD1-207ENST00000544052 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
SCFD1-207ENST00000544052 CLCN1P35523 988 aa7.27□□□□□ -1.25
SCFD1-207ENST00000544052 ADAM33Q9BZ11 813 aa7.27□□□□□ -1.25
SCFD1-207ENST00000544052 ZMYND15Q9H091 742 aa7.27□□□□□ -1.25
SCFD1-207ENST00000544052 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-207ENST00000544052 GOPCQ9HD26 462 aa7.26□□□□□ -1.25
SCFD1-207ENST00000544052 PLA2G2EQ9NZK7 142 aa7.25□□□□□ -1.25
SCFD1-207ENST00000544052 ADGRG1Q9Y653 693 aa7.25□□□□□ -1.25
SCFD1-207ENST00000544052 PXYLP1Q8TE99 480 aa7.24□□□□□ -1.25
SCFD1-207ENST00000544052 BCL2L12Q9HB09 334 aa7.24□□□□□ -1.25
SCFD1-207ENST00000544052 CERKQ8TCT0 537 aa7.24□□□□□ -1.25
SCFD1-207ENST00000544052 BEGAINQ9BUH8 593 aa7.24□□□□□ -1.25
SCFD1-207ENST00000544052 OATP04181 439 aa7.23□□□□□ -1.25
SCFD1-207ENST00000544052 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
SCFD1-207ENST00000544052 FAM217BQ9NTX9 383 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-207ENST00000544052 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
SCFD1-207ENST00000544052 TTC13Q8NBP0 860 aa7.23□□□□□ -1.25
SCFD1-207ENST00000544052 SLC4A5Q9BY07 1137 aa7.23□□□□□ -1.25
SCFD1-207ENST00000544052 PTPREP23469 700 aa7.22□□□□□ -1.25
SCFD1-207ENST00000544052 CDCA7LQ96GN5 454 aa7.22□□□□□ -1.25
SCFD1-207ENST00000544052 PCMTD1Q96MG8 357 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-207ENST00000544052 PRSS12P56730 875 aa7.21□□□□□ -1.25
SCFD1-207ENST00000544052 ONECUT3O60422 494 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-207ENST00000544052 COL9A1P20849 921 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms