RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NAIPQ13075 1403 aa20.52■□□□□ 0.87
SP140-213ENST00000543928 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
SP140-213ENST00000543928 RNF17Q9BXT8 1623 aaKnown RBP20.5■□□□□ 0.87
SP140-213ENST00000543928 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
SP140-213ENST00000543928 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
SP140-213ENST00000543928 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
SP140-213ENST00000543928 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
SP140-213ENST00000543928 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
SP140-213ENST00000543928 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
SP140-213ENST00000543928 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
SP140-213ENST00000543928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
SP140-213ENST00000543928 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
SP140-213ENST00000543928 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
SP140-213ENST00000543928 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
SP140-213ENST00000543928 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
SP140-213ENST00000543928 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
SP140-213ENST00000543928 KANK1Q14678 1352 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 FAM135AQ9P2D6 1515 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 PTPRMP28827 1452 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 UNC13BO14795 1591 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 ABCC3O15438 1527 aa20.4■□□□□ 0.86
SP140-213ENST00000543928 CEP152O94986 1710 aa20.38■□□□□ 0.85
SP140-213ENST00000543928 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
SP140-213ENST00000543928 VWDEQ8N2E2 1590 aa20.38■□□□□ 0.85
SP140-213ENST00000543928 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
SP140-213ENST00000543928 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
SP140-213ENST00000543928 NUP155O75694 1391 aa20.36■□□□□ 0.85
SP140-213ENST00000543928 CEBPAP49715 358 aaPredicted RBP20.36■□□□□ 0.85
SP140-213ENST00000543928 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
SP140-213ENST00000543928 C3P01024 1663 aa20.34■□□□□ 0.85
SP140-213ENST00000543928 LMTK2Q8IWU2 1503 aa20.33■□□□□ 0.85
SP140-213ENST00000543928 TRIM52Q96A61 297 aa20.33■□□□□ 0.85
SP140-213ENST00000543928 CAMSAP1Q5T5Y3 1602 aa20.33■□□□□ 0.84
SP140-213ENST00000543928 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
SP140-213ENST00000543928 PZPP20742 1482 aa20.3■□□□□ 0.84
SP140-213ENST00000543928 TET3O43151 1660 aa20.29■□□□□ 0.84
SP140-213ENST00000543928 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.84
SP140-213ENST00000543928 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
SP140-213ENST00000543928 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
SP140-213ENST00000543928 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
SP140-213ENST00000543928 NPATQ14207 1427 aa20.27■□□□□ 0.83
SP140-213ENST00000543928 HRCP23327 699 aa20.26■□□□□ 0.83
SP140-213ENST00000543928 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
SP140-213ENST00000543928 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
SP140-213ENST00000543928 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
SP140-213ENST00000543928 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
SP140-213ENST00000543928 RPRD2Q5VT52 1461 aaKnown RBP20.22■□□□□ 0.83
SP140-213ENST00000543928 E9PCH4 1651 aa20.22■□□□□ 0.83
SP140-213ENST00000543928 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
SP140-213ENST00000543928 SPATA31D1Q6ZQQ2 1576 aa20.21■□□□□ 0.83
SP140-213ENST00000543928 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 TNRQ92752 1358 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 PKD2Q13563 968 aa20.18■□□□□ 0.82
SP140-213ENST00000543928 NOS1P29475 1434 aa20.17■□□□□ 0.82
SP140-213ENST00000543928 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
SP140-213ENST00000543928 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
SP140-213ENST00000543928 SYNMO15061 1565 aa20.13■□□□□ 0.81
SP140-213ENST00000543928 FOXD1Q16676 465 aa20.13■□□□□ 0.81
SP140-213ENST00000543928 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
SP140-213ENST00000543928 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
SP140-213ENST00000543928 PTPRTO14522 1441 aa20.1■□□□□ 0.81
SP140-213ENST00000543928 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
SP140-213ENST00000543928 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
SP140-213ENST00000543928 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
SP140-213ENST00000543928 IDI1Q13907 227 aa20.08■□□□□ 0.81
SP140-213ENST00000543928 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.81
SP140-213ENST00000543928 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.8
SP140-213ENST00000543928 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
SP140-213ENST00000543928 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
SP140-213ENST00000543928 TRPM2O94759 1503 aa20.07■□□□□ 0.8
SP140-213ENST00000543928 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
SP140-213ENST00000543928 HSPA2P54652 639 aa20.04■□□□□ 0.8
SP140-213ENST00000543928 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
SP140-213ENST00000543928 CLTCL1P53675 1640 aa20.02■□□□□ 0.79
SP140-213ENST00000543928 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
SP140-213ENST00000543928 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
SP140-213ENST00000543928 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
SP140-213ENST00000543928 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
SP140-213ENST00000543928 ADGRB3O60242 1522 aa20■□□□□ 0.79
SP140-213ENST00000543928 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
SP140-213ENST00000543928 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
SP140-213ENST00000543928 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
SP140-213ENST00000543928 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
SP140-213ENST00000543928 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
SP140-213ENST00000543928 KIF1BO60333 1816 aa19.94■□□□□ 0.78
SP140-213ENST00000543928 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
SP140-213ENST00000543928 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
SP140-213ENST00000543928 SLIT1O75093 1534 aa19.91■□□□□ 0.78
SP140-213ENST00000543928 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
SP140-213ENST00000543928 ANKLE2Q86XL3 938 aa19.89■□□□□ 0.77
SP140-213ENST00000543928 NCKAP5LQ9HCH0 1330 aa19.89■□□□□ 0.77
SP140-213ENST00000543928 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
SP140-213ENST00000543928 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
SP140-213ENST00000543928 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 ZFYVE9O95405 1425 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms