RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PTPRTO14522 1441 aa17.45■□□□□ 0.38
COPS7A-217ENST00000543537 NCOA1Q15788 1441 aa17.44■□□□□ 0.38
COPS7A-217ENST00000543537 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
COPS7A-217ENST00000543537 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
COPS7A-217ENST00000543537 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
COPS7A-217ENST00000543537 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
COPS7A-217ENST00000543537 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
COPS7A-217ENST00000543537 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
COPS7A-217ENST00000543537 ABCC5O15440 1437 aa17.42■□□□□ 0.38
COPS7A-217ENST00000543537 PZPP20742 1482 aa17.42■□□□□ 0.38
COPS7A-217ENST00000543537 PLA2R1Q13018 1463 aa17.41■□□□□ 0.38
COPS7A-217ENST00000543537 MYO3AQ8NEV4 1616 aa17.4■□□□□ 0.38
COPS7A-217ENST00000543537 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
COPS7A-217ENST00000543537 CEP170BQ9Y4F5 1589 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-217ENST00000543537 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
COPS7A-217ENST00000543537 DAPK1P53355 1430 aa17.38■□□□□ 0.37
COPS7A-217ENST00000543537 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
COPS7A-217ENST00000543537 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
COPS7A-217ENST00000543537 CAMSAP1Q5T5Y3 1602 aa17.37■□□□□ 0.37
COPS7A-217ENST00000543537 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
COPS7A-217ENST00000543537 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
COPS7A-217ENST00000543537 MROH1Q8NDA8 1641 aa17.36■□□□□ 0.37
COPS7A-217ENST00000543537 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
COPS7A-217ENST00000543537 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
COPS7A-217ENST00000543537 ABCC3O15438 1527 aa17.36■□□□□ 0.37
COPS7A-217ENST00000543537 CERKQ8TCT0 537 aa17.35■□□□□ 0.37
COPS7A-217ENST00000543537 TNRQ92752 1358 aa17.35■□□□□ 0.37
COPS7A-217ENST00000543537 PKD2Q13563 968 aa17.34■□□□□ 0.37
COPS7A-217ENST00000543537 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
COPS7A-217ENST00000543537 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
COPS7A-217ENST00000543537 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
COPS7A-217ENST00000543537 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
COPS7A-217ENST00000543537 SPATA31D1Q6ZQQ2 1576 aa17.31■□□□□ 0.36
COPS7A-217ENST00000543537 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
COPS7A-217ENST00000543537 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
COPS7A-217ENST00000543537 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
COPS7A-217ENST00000543537 LTBP4Q8N2S1 1624 aa17.29■□□□□ 0.36
COPS7A-217ENST00000543537 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
COPS7A-217ENST00000543537 ERVK-7P63135 1459 aa17.27■□□□□ 0.36
COPS7A-217ENST00000543537 IQSEC2Q5JU85 1478 aa17.27■□□□□ 0.36
COPS7A-217ENST00000543537 NCKAP5LQ9HCH0 1330 aa17.26■□□□□ 0.35
COPS7A-217ENST00000543537 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-217ENST00000543537 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
COPS7A-217ENST00000543537 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
COPS7A-217ENST00000543537 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
COPS7A-217ENST00000543537 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
COPS7A-217ENST00000543537 CEP152O94986 1710 aa17.22■□□□□ 0.35
COPS7A-217ENST00000543537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.35
COPS7A-217ENST00000543537 MED14O60244 1454 aa17.22■□□□□ 0.35
COPS7A-217ENST00000543537 NEURL4Q96JN8 1562 aa17.22■□□□□ 0.35
COPS7A-217ENST00000543537 KANK1Q14678 1352 aa17.21■□□□□ 0.35
COPS7A-217ENST00000543537 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
COPS7A-217ENST00000543537 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
COPS7A-217ENST00000543537 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
COPS7A-217ENST00000543537 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
COPS7A-217ENST00000543537 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
COPS7A-217ENST00000543537 ANKLE2Q86XL3 938 aa17.19■□□□□ 0.34
COPS7A-217ENST00000543537 ANKRD50Q9ULJ7 1429 aa17.19■□□□□ 0.34
COPS7A-217ENST00000543537 ZNF335Q9H4Z2 1342 aaPredicted RBP17.17■□□□□ 0.34
COPS7A-217ENST00000543537 ARHGAP23Q9P227 1491 aa17.15■□□□□ 0.34
COPS7A-217ENST00000543537 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
COPS7A-217ENST00000543537 NOS1P29475 1434 aa17.14■□□□□ 0.33
COPS7A-217ENST00000543537 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
COPS7A-217ENST00000543537 UBR1Q8IWV7 1749 aa17.14■□□□□ 0.33
COPS7A-217ENST00000543537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
COPS7A-217ENST00000543537 SLIT1O75093 1534 aa17.14■□□□□ 0.33
COPS7A-217ENST00000543537 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
COPS7A-217ENST00000543537 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
COPS7A-217ENST00000543537 NPHP4O75161 1426 aaPredicted RBP17.13■□□□□ 0.33
COPS7A-217ENST00000543537 HRCP23327 699 aa17.12■□□□□ 0.33
COPS7A-217ENST00000543537 CFAP65Q6ZU64 1925 aaKnown RBP17.11■□□□□ 0.33
COPS7A-217ENST00000543537 CPS1P31327 1500 aa17.11■□□□□ 0.33
COPS7A-217ENST00000543537 UNC13BO14795 1591 aa17.1■□□□□ 0.33
COPS7A-217ENST00000543537 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
COPS7A-217ENST00000543537 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
COPS7A-217ENST00000543537 SYNMO15061 1565 aa17.08■□□□□ 0.32
COPS7A-217ENST00000543537 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
COPS7A-217ENST00000543537 TET3O43151 1660 aa17.07■□□□□ 0.32
COPS7A-217ENST00000543537 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
COPS7A-217ENST00000543537 ACIN1Q9UKV3 1341 aaKnown RBP17.07■□□□□ 0.32
COPS7A-217ENST00000543537 IDI1Q13907 227 aa17.07■□□□□ 0.32
COPS7A-217ENST00000543537 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
COPS7A-217ENST00000543537 LTKP29376 864 aa17.05■□□□□ 0.32
COPS7A-217ENST00000543537 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
COPS7A-217ENST00000543537 GCC2Q8IWJ2 1684 aa17.03■□□□□ 0.32
COPS7A-217ENST00000543537 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
COPS7A-217ENST00000543537 ADGRB3O60242 1522 aa17.02■□□□□ 0.32
COPS7A-217ENST00000543537 EID1Q9Y6B2 187 aa17.02■□□□□ 0.32
COPS7A-217ENST00000543537 UBAP1LF5GYI3 381 aa16.98■□□□□ 0.31
COPS7A-217ENST00000543537 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
COPS7A-217ENST00000543537 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
COPS7A-217ENST00000543537 NUP155O75694 1391 aa16.97■□□□□ 0.31
COPS7A-217ENST00000543537 E9PCH4 1651 aa16.97■□□□□ 0.31
COPS7A-217ENST00000543537 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
COPS7A-217ENST00000543537 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
COPS7A-217ENST00000543537 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.31
COPS7A-217ENST00000543537 ITGAEP38570 1179 aa16.95■□□□□ 0.3
COPS7A-217ENST00000543537 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
COPS7A-217ENST00000543537 NAIPQ13075 1403 aa16.95■□□□□ 0.3
COPS7A-217ENST00000543537 TOM1O60784 492 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms