RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
SMCR5-201ENST00000543475 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
SMCR5-201ENST00000543475 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
SMCR5-201ENST00000543475 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
SMCR5-201ENST00000543475 ADGRL2O95490 1459 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 NFKBIBQ15653 356 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 ADAMTS12P58397 1594 aa16.5■□□□□ 0.23
SMCR5-201ENST00000543475 NUP155O75694 1391 aa16.49■□□□□ 0.23
SMCR5-201ENST00000543475 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
SMCR5-201ENST00000543475 CROCC2H7BZ55 1655 aa16.48■□□□□ 0.23
SMCR5-201ENST00000543475 KIAA0586Q9BVV6 1533 aa16.48■□□□□ 0.23
SMCR5-201ENST00000543475 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
SMCR5-201ENST00000543475 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
SMCR5-201ENST00000543475 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
SMCR5-201ENST00000543475 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
SMCR5-201ENST00000543475 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.22
SMCR5-201ENST00000543475 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
SMCR5-201ENST00000543475 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
SMCR5-201ENST00000543475 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
SMCR5-201ENST00000543475 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
SMCR5-201ENST00000543475 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
SMCR5-201ENST00000543475 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
SMCR5-201ENST00000543475 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
SMCR5-201ENST00000543475 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
SMCR5-201ENST00000543475 INSRP06213 1382 aa16.41■□□□□ 0.22
SMCR5-201ENST00000543475 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
SMCR5-201ENST00000543475 PLEKHH2Q8IVE3 1493 aa16.4■□□□□ 0.22
SMCR5-201ENST00000543475 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
SMCR5-201ENST00000543475 ZMYM4Q5VZL5 1548 aa16.39■□□□□ 0.21
SMCR5-201ENST00000543475 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
SMCR5-201ENST00000543475 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
SMCR5-201ENST00000543475 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
SMCR5-201ENST00000543475 C8orf34Q49A92 452 aa16.36■□□□□ 0.21
SMCR5-201ENST00000543475 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
SMCR5-201ENST00000543475 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
SMCR5-201ENST00000543475 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
SMCR5-201ENST00000543475 PANK3Q9H999 370 aa16.35■□□□□ 0.21
SMCR5-201ENST00000543475 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
SMCR5-201ENST00000543475 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
SMCR5-201ENST00000543475 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
SMCR5-201ENST00000543475 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
SMCR5-201ENST00000543475 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.21
SMCR5-201ENST00000543475 SHANK2Q9UPX8 1470 aa16.33■□□□□ 0.21
SMCR5-201ENST00000543475 CDC42BPAQ5VT25 1732 aa16.33■□□□□ 0.21
SMCR5-201ENST00000543475 RGS3P49796 1198 aa16.33■□□□□ 0.2
SMCR5-201ENST00000543475 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
SMCR5-201ENST00000543475 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.2
SMCR5-201ENST00000543475 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
SMCR5-201ENST00000543475 DISP3Q9P2K9 1392 aa16.33■□□□□ 0.2
SMCR5-201ENST00000543475 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
SMCR5-201ENST00000543475 PTPRGP23470 1445 aa16.31■□□□□ 0.2
SMCR5-201ENST00000543475 DUSP27Q5VZP5 1158 aa16.31■□□□□ 0.2
SMCR5-201ENST00000543475 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
SMCR5-201ENST00000543475 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMCR5-201ENST00000543475 TESK2Q96S53 571 aa16.29■□□□□ 0.2
SMCR5-201ENST00000543475 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
SMCR5-201ENST00000543475 TMF1P82094 1093 aa16.28■□□□□ 0.2
SMCR5-201ENST00000543475 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
SMCR5-201ENST00000543475 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
SMCR5-201ENST00000543475 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
SMCR5-201ENST00000543475 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
SMCR5-201ENST00000543475 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
SMCR5-201ENST00000543475 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.2
SMCR5-201ENST00000543475 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.19
SMCR5-201ENST00000543475 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
SMCR5-201ENST00000543475 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMCR5-201ENST00000543475 FAM43AQ8N2R8 423 aa16.26■□□□□ 0.19
SMCR5-201ENST00000543475 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
SMCR5-201ENST00000543475 LAMC1P11047 1609 aa16.24■□□□□ 0.19
SMCR5-201ENST00000543475 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
SMCR5-201ENST00000543475 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
SMCR5-201ENST00000543475 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
SMCR5-201ENST00000543475 A2MP01023 1474 aa16.23■□□□□ 0.19
SMCR5-201ENST00000543475 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
SMCR5-201ENST00000543475 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
SMCR5-201ENST00000543475 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
SMCR5-201ENST00000543475 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
SMCR5-201ENST00000543475 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
SMCR5-201ENST00000543475 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
SMCR5-201ENST00000543475 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
SMCR5-201ENST00000543475 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
SMCR5-201ENST00000543475 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
SMCR5-201ENST00000543475 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
SMCR5-201ENST00000543475 EIF3AQ14152 1382 aaKnown RBP16.19■□□□□ 0.18
SMCR5-201ENST00000543475 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
SMCR5-201ENST00000543475 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
SMCR5-201ENST00000543475 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
SMCR5-201ENST00000543475 BECN1Q14457 450 aa16.18■□□□□ 0.18
SMCR5-201ENST00000543475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMCR5-201ENST00000543475 POGKQ9P215 609 aa16.18■□□□□ 0.18
SMCR5-201ENST00000543475 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
SMCR5-201ENST00000543475 MAGI2Q86UL8 1455 aa16.17■□□□□ 0.18
SMCR5-201ENST00000543475 USP19O94966 1318 aa16.16■□□□□ 0.18
SMCR5-201ENST00000543475 BCAR3O75815 825 aa16.16■□□□□ 0.18
SMCR5-201ENST00000543475 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
SMCR5-201ENST00000543475 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms