RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
MDM2-230ENST00000543323 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
MDM2-230ENST00000543323 MCM6Q14566 821 aa10.34□□□□□ -0.75
MDM2-230ENST00000543323 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
MDM2-230ENST00000543323 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
MDM2-230ENST00000543323 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
MDM2-230ENST00000543323 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
MDM2-230ENST00000543323 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
MDM2-230ENST00000543323 NPDC1Q9NQX5 325 aaPredicted RBP10.33□□□□□ -0.76
MDM2-230ENST00000543323 C7P10643 843 aa10.32□□□□□ -0.76
MDM2-230ENST00000543323 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
MDM2-230ENST00000543323 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
MDM2-230ENST00000543323 EPAS1Q99814 870 aa10.32□□□□□ -0.76
MDM2-230ENST00000543323 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
MDM2-230ENST00000543323 SEC24BO95487 1268 aa10.31□□□□□ -0.76
MDM2-230ENST00000543323 MDM2Q00987 491 aaPredicted RBP10.31□□□□□ -0.76
MDM2-230ENST00000543323 PHF14O94880 888 aa10.3□□□□□ -0.76
MDM2-230ENST00000543323 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
MDM2-230ENST00000543323 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
MDM2-230ENST00000543323 MAP3K7O43318 606 aa10.28□□□□□ -0.76
MDM2-230ENST00000543323 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
MDM2-230ENST00000543323 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
MDM2-230ENST00000543323 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
MDM2-230ENST00000543323 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
MDM2-230ENST00000543323 SLC34A2O95436 690 aa10.27□□□□□ -0.77
MDM2-230ENST00000543323 PDIA4P13667 645 aaKnown RBP10.27□□□□□ -0.77
MDM2-230ENST00000543323 PROSER2Q86WR7 435 aaPredicted RBP10.26□□□□□ -0.77
MDM2-230ENST00000543323 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
MDM2-230ENST00000543323 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
MDM2-230ENST00000543323 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
MDM2-230ENST00000543323 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
MDM2-230ENST00000543323 PROCA1Q8NCQ7 364 aaPredicted RBP10.23□□□□□ -0.77
MDM2-230ENST00000543323 SLAIN1Q8ND83 568 aa10.23□□□□□ -0.77
MDM2-230ENST00000543323 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
MDM2-230ENST00000543323 RAD21O60216 631 aa10.22□□□□□ -0.77
MDM2-230ENST00000543323 TSR1Q2NL82 804 aaKnown RBP10.22□□□□□ -0.77
MDM2-230ENST00000543323 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
MDM2-230ENST00000543323 OATP04181 439 aa10.21□□□□□ -0.77
MDM2-230ENST00000543323 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
MDM2-230ENST00000543323 POM121Q96HA1 1249 aa10.21□□□□□ -0.77
MDM2-230ENST00000543323 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
MDM2-230ENST00000543323 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
MDM2-230ENST00000543323 ATP1B4Q9UN42 357 aaPredicted RBP10.21□□□□□ -0.77
MDM2-230ENST00000543323 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
MDM2-230ENST00000543323 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.2□□□□□ -0.78
MDM2-230ENST00000543323 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
MDM2-230ENST00000543323 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
MDM2-230ENST00000543323 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
MDM2-230ENST00000543323 C3orf67Q6ZVT6 689 aa10.18□□□□□ -0.78
MDM2-230ENST00000543323 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
MDM2-230ENST00000543323 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
MDM2-230ENST00000543323 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
MDM2-230ENST00000543323 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
MDM2-230ENST00000543323 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
MDM2-230ENST00000543323 CCDC97Q96F63 343 aaPredicted RBP10.17□□□□□ -0.78
MDM2-230ENST00000543323 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
MDM2-230ENST00000543323 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
MDM2-230ENST00000543323 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
MDM2-230ENST00000543323 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
MDM2-230ENST00000543323 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
MDM2-230ENST00000543323 COG6Q9Y2V7 657 aa10.15□□□□□ -0.78
MDM2-230ENST00000543323 DIXDC1Q155Q3 683 aa10.14□□□□□ -0.79
MDM2-230ENST00000543323 NPM2Q86SE8 214 aaKnown RBP10.14□□□□□ -0.79
MDM2-230ENST00000543323 NECTIN2Q92692 538 aa10.14□□□□□ -0.79
MDM2-230ENST00000543323 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
MDM2-230ENST00000543323 RFC5P40937 340 aa10.13□□□□□ -0.79
MDM2-230ENST00000543323 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
MDM2-230ENST00000543323 TTC13Q8NBP0 860 aa10.12□□□□□ -0.79
MDM2-230ENST00000543323 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
MDM2-230ENST00000543323 FOSBP53539 338 aa10.11□□□□□ -0.79
MDM2-230ENST00000543323 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
MDM2-230ENST00000543323 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
MDM2-230ENST00000543323 SNRKQ9NRH2 765 aa10.11□□□□□ -0.79
MDM2-230ENST00000543323 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
MDM2-230ENST00000543323 KDM4FA0A1W2PPD8 638 aa10.1□□□□□ -0.79
MDM2-230ENST00000543323 TMEM259Q4ZIN3 620 aa10.1□□□□□ -0.79
MDM2-230ENST00000543323 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
MDM2-230ENST00000543323 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
MDM2-230ENST00000543323 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
MDM2-230ENST00000543323 ZNF330Q9Y3S2 320 aaPredicted RBP10.08□□□□□ -0.8
MDM2-230ENST00000543323 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
MDM2-230ENST00000543323 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
MDM2-230ENST00000543323 LIMD1Q9UGP4 676 aa10.07□□□□□ -0.8
MDM2-230ENST00000543323 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
MDM2-230ENST00000543323 PRSS12P56730 875 aa10.05□□□□□ -0.8
MDM2-230ENST00000543323 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
MDM2-230ENST00000543323 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
MDM2-230ENST00000543323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
MDM2-230ENST00000543323 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
MDM2-230ENST00000543323 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
MDM2-230ENST00000543323 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
MDM2-230ENST00000543323 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
MDM2-230ENST00000543323 SOCS7O14512 581 aa10.02□□□□□ -0.81
MDM2-230ENST00000543323 SPTLC1O15269 473 aa10.02□□□□□ -0.81
MDM2-230ENST00000543323 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
MDM2-230ENST00000543323 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
MDM2-230ENST00000543323 POTEJP0CG39 1038 aa10.01□□□□□ -0.81
MDM2-230ENST00000543323 CD46P15529 392 aa10.01□□□□□ -0.81
MDM2-230ENST00000543323 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
MDM2-230ENST00000543323 GDPD2Q9HCC8 539 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms