RNA–Protein interactions for RNA: ENST00000543303.6

MTHFSD-203, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTHFSD, Length 1,207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-203ENST00000543303 CNTLNQ9NXG0 1405 aa26.73■■□□□ 1.87
MTHFSD-203ENST00000543303 ERBINQ96RT1 1412 aa26.72■■□□□ 1.87
MTHFSD-203ENST00000543303 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
MTHFSD-203ENST00000543303 CLTCQ00610 1675 aaKnown RBP26.71■■□□□ 1.87
MTHFSD-203ENST00000543303 RNF17Q9BXT8 1623 aaKnown RBP26.71■■□□□ 1.87
MTHFSD-203ENST00000543303 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
MTHFSD-203ENST00000543303 C3P01024 1663 aa26.7■■□□□ 1.87
MTHFSD-203ENST00000543303 MROH1Q8NDA8 1641 aa26.7■■□□□ 1.86
MTHFSD-203ENST00000543303 ROCK1Q13464 1354 aa26.68■■□□□ 1.86
MTHFSD-203ENST00000543303 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
MTHFSD-203ENST00000543303 ANKRD50Q9ULJ7 1429 aa26.64■■□□□ 1.85
MTHFSD-203ENST00000543303 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
MTHFSD-203ENST00000543303 KDM5DQ9BY66 1539 aa26.63■■□□□ 1.85
MTHFSD-203ENST00000543303 ABCC3O15438 1527 aa26.6■■□□□ 1.85
MTHFSD-203ENST00000543303 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
MTHFSD-203ENST00000543303 LMTK3Q96Q04 1460 aa26.6■■□□□ 1.85
MTHFSD-203ENST00000543303 DEPDC5O75140 1603 aa26.59■■□□□ 1.85
MTHFSD-203ENST00000543303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.859e-7■■□□□ 12.5
MTHFSD-203ENST00000543303 PRDM15P57071 1507 aaPredicted RBP26.59■■□□□ 1.85
MTHFSD-203ENST00000543303 FBXO31Q5XUX0 539 aaPredicted RBP26.56■■□□□ 1.84
MTHFSD-203ENST00000543303 NPATQ14207 1427 aa26.55■■□□□ 1.84
MTHFSD-203ENST00000543303 CEP152O94986 1710 aa26.53■■□□□ 1.84
MTHFSD-203ENST00000543303 SETD1BQ9UPS6 1966 aaKnown RBP26.53■■□□□ 1.84
MTHFSD-203ENST00000543303 VWDEQ8N2E2 1590 aa26.53■■□□□ 1.84
MTHFSD-203ENST00000543303 PZPP20742 1482 aa26.52■■□□□ 1.84
MTHFSD-203ENST00000543303 ZC3H13Q5T200 1668 aaKnown RBP26.51■■□□□ 1.83
MTHFSD-203ENST00000543303 HSPA2P54652 639 aa26.51■■□□□ 1.83
MTHFSD-203ENST00000543303 NAIPQ13075 1403 aa26.5■■□□□ 1.83
MTHFSD-203ENST00000543303 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
MTHFSD-203ENST00000543303 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
MTHFSD-203ENST00000543303 KANK1Q14678 1352 aa26.47■■□□□ 1.83
MTHFSD-203ENST00000543303 UHRF1BP1Q6BDS2 1440 aa26.47■■□□□ 1.83
MTHFSD-203ENST00000543303 LMTK2Q8IWU2 1503 aa26.46■■□□□ 1.83
MTHFSD-203ENST00000543303 UNC13BO14795 1591 aa26.46■■□□□ 1.83
MTHFSD-203ENST00000543303 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
MTHFSD-203ENST00000543303 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
MTHFSD-203ENST00000543303 TNRQ92752 1358 aa26.43■■□□□ 1.82
MTHFSD-203ENST00000543303 ERVK-7P63135 1459 aa26.41■■□□□ 1.82
MTHFSD-203ENST00000543303 GCC2Q8IWJ2 1684 aa26.41■■□□□ 1.82
MTHFSD-203ENST00000543303 SPATA31D1Q6ZQQ2 1576 aa26.4■■□□□ 1.82
MTHFSD-203ENST00000543303 MYO3AQ8NEV4 1616 aa26.39■■□□□ 1.82
MTHFSD-203ENST00000543303 NUP155O75694 1391 aa26.38■■□□□ 1.81
MTHFSD-203ENST00000543303 CFAP65Q6ZU64 1925 aaKnown RBP26.38■■□□□ 1.81
MTHFSD-203ENST00000543303 EFCAB6Q5THR3 1501 aa26.36■■□□□ 1.81
MTHFSD-203ENST00000543303 CEP170BQ9Y4F5 1589 aaPredicted RBP26.34■■□□□ 1.81
MTHFSD-203ENST00000543303 IQGAP3Q86VI3 1631 aa26.34■■□□□ 1.81
MTHFSD-203ENST00000543303 A2ML1A8K2U0 1454 aa26.33■■□□□ 1.81
MTHFSD-203ENST00000543303 TET3O43151 1660 aa26.32■■□□□ 1.8
MTHFSD-203ENST00000543303 ZNF142P52746 1687 aaPredicted RBP26.32■■□□□ 1.8
MTHFSD-203ENST00000543303 NOS1P29475 1434 aa26.3■■□□□ 1.8
MTHFSD-203ENST00000543303 NLRP1Q9C000 1473 aa26.29■■□□□ 1.8
MTHFSD-203ENST00000543303 STRCQ7RTU9 1775 aa26.26■■□□□ 1.79
MTHFSD-203ENST00000543303 E9PCH4 1651 aa26.26■■□□□ 1.79
MTHFSD-203ENST00000543303 SYNMO15061 1565 aa26.26■■□□□ 1.79
MTHFSD-203ENST00000543303 RPRD2Q5VT52 1461 aaKnown RBP26.26■■□□□ 1.79
MTHFSD-203ENST00000543303 TRIM52Q96A61 297 aa26.23■■□□□ 1.79
MTHFSD-203ENST00000543303 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
MTHFSD-203ENST00000543303 IDI1Q13907 227 aa26.22■■□□□ 1.79
MTHFSD-203ENST00000543303 UGGT1Q9NYU2 1555 aa26.2■■□□□ 1.79
MTHFSD-203ENST00000543303 NCKAP5LQ9HCH0 1330 aa26.2■■□□□ 1.79
MTHFSD-203ENST00000543303 PLA2R1Q13018 1463 aa26.18■■□□□ 1.78
MTHFSD-203ENST00000543303 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
MTHFSD-203ENST00000543303 PIK3C2BO00750 1634 aa26.17■■□□□ 1.78
MTHFSD-203ENST00000543303 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
MTHFSD-203ENST00000543303 UBR1Q8IWV7 1749 aa26.15■■□□□ 1.78
MTHFSD-203ENST00000543303 SLC52A1Q9NWF4 448 aa26.14■■□□□ 1.78
MTHFSD-203ENST00000543303 PKD2Q13563 968 aa26.13■■□□□ 1.77
MTHFSD-203ENST00000543303 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
MTHFSD-203ENST00000543303 PTPRTO14522 1441 aa26.12■■□□□ 1.77
MTHFSD-203ENST00000543303 MPHOSPH9Q99550 1183 aa26.09■■□□□ 1.77
MTHFSD-203ENST00000543303 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
MTHFSD-203ENST00000543303 NEURL4Q96JN8 1562 aa26.07■■□□□ 1.76
MTHFSD-203ENST00000543303 ARHGAP23Q9P227 1491 aa26.07■■□□□ 1.76
MTHFSD-203ENST00000543303 FOXD1Q16676 465 aa26.07■■□□□ 1.76
MTHFSD-203ENST00000543303 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
MTHFSD-203ENST00000543303 ADGRB3O60242 1522 aa26.06■■□□□ 1.76
MTHFSD-203ENST00000543303 LTKP29376 864 aa26.06■■□□□ 1.76
MTHFSD-203ENST00000543303 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
MTHFSD-203ENST00000543303 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
MTHFSD-203ENST00000543303 SLIT1O75093 1534 aa26.04■■□□□ 1.76
MTHFSD-203ENST00000543303 KDM5AP29375 1690 aaKnown RBP26.04■■□□□ 1.76
MTHFSD-203ENST00000543303 TMEM2Q9UHN6 1383 aa26.04■■□□□ 1.76
MTHFSD-203ENST00000543303 TMEM131LA2VDJ0 1609 aa26.03■■□□□ 1.76
MTHFSD-203ENST00000543303 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
MTHFSD-203ENST00000543303 HRCP23327 699 aa26.01■■□□□ 1.75
MTHFSD-203ENST00000543303 TRPM2O94759 1503 aa26■■□□□ 1.75
MTHFSD-203ENST00000543303 MED14O60244 1454 aa26■■□□□ 1.75
MTHFSD-203ENST00000543303 TXNDC2Q86VQ3 553 aa26■■□□□ 1.75
MTHFSD-203ENST00000543303 MYO5BQ9ULV0 1848 aa26■■□□□ 1.75
MTHFSD-203ENST00000543303 CHGAP10645 457 aaKnown RBP25.99■■□□□ 1.75
MTHFSD-203ENST00000543303 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
MTHFSD-203ENST00000543303 CLTCL1P53675 1640 aa25.98■■□□□ 1.75
MTHFSD-203ENST00000543303 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
MTHFSD-203ENST00000543303 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
MTHFSD-203ENST00000543303 ZFYVE9O95405 1425 aa25.95■■□□□ 1.74
MTHFSD-203ENST00000543303 TRIM26Q12899 539 aaPredicted RBP25.93■■□□□ 1.74
MTHFSD-203ENST00000543303 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
MTHFSD-203ENST00000543303 RIMS2Q9UQ26 1411 aa25.92■■□□□ 1.74
MTHFSD-203ENST00000543303 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
MTHFSD-203ENST00000543303 IQGAP1P46940 1657 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms