RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ADGRL2O95490 1459 aa31.31■■■□□ 2.6
SHD-201ENST00000543264 WASHC2CQ9Y4E1 1318 aa31.31■■■□□ 2.6
SHD-201ENST00000543264 DISP1Q96F81 1524 aa31.3■■■□□ 2.6
SHD-201ENST00000543264 GPATCH8Q9UKJ3 1502 aaKnown RBP31.3■■■□□ 2.6
SHD-201ENST00000543264 TROQ12816 1431 aaPredicted RBP31.3■■■□□ 2.6
SHD-201ENST00000543264 DDRGK1Q96HY6 314 aa31.3■■■□□ 2.6
SHD-201ENST00000543264 RAPGEF6Q8TEU7 1601 aa31.3■■■□□ 2.6
SHD-201ENST00000543264 PARD3Q8TEW0 1356 aa31.28■■■□□ 2.6
SHD-201ENST00000543264 KIAA0556O60303 1618 aa31.28■■■□□ 2.6
SHD-201ENST00000543264 KIAA0586Q9BVV6 1533 aa31.27■■■□□ 2.6
SHD-201ENST00000543264 ARHGEF12Q9NZN5 1544 aa31.26■■■□□ 2.59
SHD-201ENST00000543264 E9PCH4 1651 aa31.25■■■□□ 2.59
SHD-201ENST00000543264 CC2D1BQ5T0F9 858 aaKnown RBP31.23■■■□□ 2.59
SHD-201ENST00000543264 SLC4A3P48751 1232 aa31.23■■■□□ 2.59
SHD-201ENST00000543264 ITSN2Q9NZM3 1697 aa31.22■■■□□ 2.59
SHD-201ENST00000543264 PER1O15534 1290 aaPredicted RBP31.21■■■□□ 2.59
SHD-201ENST00000543264 CROCC2H7BZ55 1655 aa31.19■■■□□ 2.58
SHD-201ENST00000543264 GSE1Q14687 1217 aa31.18■■■□□ 2.58
SHD-201ENST00000543264 NFKBIBQ15653 356 aa31.18■■■□□ 2.58
SHD-201ENST00000543264 C20orf194Q5TEA3 1177 aa31.17■■■□□ 2.58
SHD-201ENST00000543264 BRPF3Q9ULD4 1205 aa31.16■■■□□ 2.58
SHD-201ENST00000543264 DAXXQ9UER7 740 aaPredicted RBP31.16■■■□□ 2.58
SHD-201ENST00000543264 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.15■■■□□ 2.58
SHD-201ENST00000543264 NBPF1Q3BBV0 1214 aa31.13■■■□□ 2.57
SHD-201ENST00000543264 TSPY4P0CV99 314 aa31.12■■■□□ 2.57
SHD-201ENST00000543264 TSPY10P0CW01 314 aa31.12■■■□□ 2.57
SHD-201ENST00000543264 RGL3Q3MIN7 710 aa31.11■■■□□ 2.57
SHD-201ENST00000543264 PLB1Q6P1J6 1458 aa31.11■■■□□ 2.57
SHD-201ENST00000543264 C9orf84Q5VXU9 1444 aa31.1■■■□□ 2.57
SHD-201ENST00000543264 CEP170Q5SW79 1584 aa31.08■■■□□ 2.57
SHD-201ENST00000543264 PANK3Q9H999 370 aa31.08■■■□□ 2.57
SHD-201ENST00000543264 BLMP54132 1417 aaPredicted RBP31.08■■■□□ 2.57
SHD-201ENST00000543264 KDM2BQ8NHM5 1336 aa31.06■■■□□ 2.56
SHD-201ENST00000543264 FRAT1Q92837 279 aaPredicted RBP31.06■■■□□ 2.56
SHD-201ENST00000543264 ZNF608Q9ULD9 1512 aaPredicted RBP31.04■■■□□ 2.56
SHD-201ENST00000543264 CENPQQ7L2Z9 268 aaPredicted RBP31.03■■■□□ 2.56
SHD-201ENST00000543264 ADAMTS8Q9UP79 889 aa31.02■■■□□ 2.56
SHD-201ENST00000543264 PRAG1Q86YV5 1406 aa31.02■■■□□ 2.56
SHD-201ENST00000543264 HNRNPMP52272 730 aaKnown RBP eCLIP31.01■■■□□ 2.55
SHD-201ENST00000543264 DISP3Q9P2K9 1392 aa31.01■■■□□ 2.55
SHD-201ENST00000543264 ADCY10Q96PN6 1610 aa31.01■■■□□ 2.55
SHD-201ENST00000543264 FAM161AQ3B820 660 aa31.01■■■□□ 2.55
SHD-201ENST00000543264 KDM5DQ9BY66 1539 aa31■■■□□ 2.55
SHD-201ENST00000543264 INSRP06213 1382 aa31■■■□□ 2.55
SHD-201ENST00000543264 PLEKHD1A6NEE1 506 aa31■■■□□ 2.55
SHD-201ENST00000543264 ZMYM4Q5VZL5 1548 aa30.98■■■□□ 2.55
SHD-201ENST00000543264 TESK2Q96S53 571 aa30.98■■■□□ 2.55
SHD-201ENST00000543264 TRPM1Q7Z4N2 1603 aa30.98■■■□□ 2.55
SHD-201ENST00000543264 C8orf34Q49A92 452 aa30.97■■■□□ 2.55
SHD-201ENST00000543264 CDC42BPAQ5VT25 1732 aa30.97■■■□□ 2.55
SHD-201ENST00000543264 SHANK2Q9UPX8 1470 aa30.97■■■□□ 2.55
SHD-201ENST00000543264 PTPRGP23470 1445 aa30.96■■■□□ 2.55
SHD-201ENST00000543264 PLEKHH2Q8IVE3 1493 aa30.95■■■□□ 2.55
SHD-201ENST00000543264 CCDC144AA2RUR9 1427 aa30.95■■■□□ 2.54
SHD-201ENST00000543264 COL17A1Q9UMD9 1497 aaPredicted RBP30.94■■■□□ 2.54
SHD-201ENST00000543264 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
SHD-201ENST00000543264 RGS3P49796 1198 aa30.94■■■□□ 2.54
SHD-201ENST00000543264 DUSP27Q5VZP5 1158 aa30.93■■■□□ 2.54
SHD-201ENST00000543264 FRAT2O75474 233 aaPredicted RBP30.91■■■□□ 2.54
SHD-201ENST00000543264 TMF1P82094 1093 aa30.91■■■□□ 2.54
SHD-201ENST00000543264 PLEKHH1Q9ULM0 1364 aa30.89■■■□□ 2.54
SHD-201ENST00000543264 ERBINQ96RT1 1412 aa30.89■■■□□ 2.54
SHD-201ENST00000543264 GPRASP1Q5JY77 1395 aa30.89■■■□□ 2.53
SHD-201ENST00000543264 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.53
SHD-201ENST00000543264 WDR43Q15061 677 aaKnown RBP eCLIP30.88■■■□□ 2.53
SHD-201ENST00000543264 FAM135AQ9P2D6 1515 aa30.87■■■□□ 2.53
SHD-201ENST00000543264 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.87■■■□□ 2.53
SHD-201ENST00000543264 GOLGA2Q08379 1002 aa30.86■■■□□ 2.53
SHD-201ENST00000543264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.85■■■□□ 2.53
SHD-201ENST00000543264 ABCC10Q5T3U5 1492 aa30.85■■■□□ 2.53
SHD-201ENST00000543264 IFT140Q96RY7 1462 aa30.84■■■□□ 2.53
SHD-201ENST00000543264 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
SHD-201ENST00000543264 EIF4G3O43432 1585 aaKnown RBP30.82■■■□□ 2.52
SHD-201ENST00000543264 FBLN2P98095 1184 aa30.82■■■□□ 2.52
SHD-201ENST00000543264 A2MP01023 1474 aa30.82■■■□□ 2.52
SHD-201ENST00000543264 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
SHD-201ENST00000543264 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.52
SHD-201ENST00000543264 PPP2R1AP30153 589 aa30.81■■■□□ 2.52
SHD-201ENST00000543264 KNSTRNQ9Y448 316 aa30.8■■■□□ 2.52
SHD-201ENST00000543264 PRDM15P57071 1507 aaPredicted RBP30.8■■■□□ 2.52
SHD-201ENST00000543264 JPH4Q96JJ6 628 aa30.79■■■□□ 2.52
SHD-201ENST00000543264 CARMIL2Q6F5E8 1435 aa30.78■■■□□ 2.52
SHD-201ENST00000543264 ZNF521Q96K83 1311 aa30.77■■■□□ 2.52
SHD-201ENST00000543264 PLA2R1Q13018 1463 aa30.77■■■□□ 2.52
SHD-201ENST00000543264 EIF5BO60841 1220 aaKnown RBP30.76■■■□□ 2.51
SHD-201ENST00000543264 SLFN5Q08AF3 891 aa30.75■■■□□ 2.51
SHD-201ENST00000543264 ATP10BO94823 1461 aa30.74■■■□□ 2.51
SHD-201ENST00000543264 CCDC146Q8IYE0 955 aa30.72■■■□□ 2.51
SHD-201ENST00000543264 LAMC1P11047 1609 aa30.7■■■□□ 2.51
SHD-201ENST00000543264 MAGI2Q86UL8 1455 aa30.7■■■□□ 2.51
SHD-201ENST00000543264 ARHGEF5Q12774 1597 aa30.7■■■□□ 2.51
SHD-201ENST00000543264 BCAR3O75815 825 aa30.69■■■□□ 2.5
SHD-201ENST00000543264 CCDC141Q6ZP82 1450 aa30.68■■■□□ 2.5
SHD-201ENST00000543264 SPINK5Q9NQ38 1064 aaPredicted RBP30.68■■■□□ 2.5
SHD-201ENST00000543264 AMER1Q5JTC6 1135 aaPredicted RBP30.67■■■□□ 2.5
SHD-201ENST00000543264 ABCA8O94911 1581 aa30.66■■■□□ 2.5
SHD-201ENST00000543264 IGHDP01880 384 aa30.65■■■□□ 2.5
SHD-201ENST00000543264 WDR7Q9Y4E6 1490 aa30.64■■■□□ 2.5
SHD-201ENST00000543264 TRMT2AQ8IZ69 625 aaKnown RBP30.63■■■□□ 2.49
SHD-201ENST00000543264 APAF1O14727 1248 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms