RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.11e-8■□□□□ 9.1
DDB1-221ENST00000543162 KDM5DQ9BY66 1539 aa15.69■□□□□ 0.1
DDB1-221ENST00000543162 MPHOSPH9Q99550 1183 aa15.69■□□□□ 0.1
DDB1-221ENST00000543162 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
DDB1-221ENST00000543162 PZPP20742 1482 aa15.68■□□□□ 0.1
DDB1-221ENST00000543162 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
DDB1-221ENST00000543162 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
DDB1-221ENST00000543162 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
DDB1-221ENST00000543162 CLSPNQ9HAW4 1339 aa15.67■□□□□ 0.1
DDB1-221ENST00000543162 KANK1Q14678 1352 aa15.66■□□□□ 0.1
DDB1-221ENST00000543162 RNF17Q9BXT8 1623 aaKnown RBP15.66■□□□□ 0.1
DDB1-221ENST00000543162 IQGAP3Q86VI3 1631 aa15.65■□□□□ 0.1
DDB1-221ENST00000543162 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
DDB1-221ENST00000543162 AGLP35573 1532 aa15.64■□□□□ 0.09
DDB1-221ENST00000543162 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
DDB1-221ENST00000543162 MROH1Q8NDA8 1641 aa15.64■□□□□ 0.09
DDB1-221ENST00000543162 GGT6Q6P531 493 aa15.63■□□□□ 0.09
DDB1-221ENST00000543162 PKD2Q13563 968 aa15.62■□□□□ 0.09
DDB1-221ENST00000543162 VWDEQ8N2E2 1590 aa15.62■□□□□ 0.09
DDB1-221ENST00000543162 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
DDB1-221ENST00000543162 FOXD1Q16676 465 aa15.59■□□□□ 0.09
DDB1-221ENST00000543162 ARID4BQ4LE39 1312 aaPredicted RBP15.59■□□□□ 0.09
DDB1-221ENST00000543162 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
DDB1-221ENST00000543162 TET3O43151 1660 aa15.57■□□□□ 0.08
DDB1-221ENST00000543162 WASHC2CQ9Y4E1 1318 aa15.57■□□□□ 0.08
DDB1-221ENST00000543162 LMTK2Q8IWU2 1503 aa15.57■□□□□ 0.08
DDB1-221ENST00000543162 CEP152O94986 1710 aa15.57■□□□□ 0.08
DDB1-221ENST00000543162 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
DDB1-221ENST00000543162 ABCC3O15438 1527 aa15.56■□□□□ 0.08
DDB1-221ENST00000543162 ZC3H13Q5T200 1668 aaKnown RBP15.55■□□□□ 0.08
DDB1-221ENST00000543162 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
DDB1-221ENST00000543162 MLECQ14165 292 aa15.55■□□□□ 0.08
DDB1-221ENST00000543162 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
DDB1-221ENST00000543162 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
DDB1-221ENST00000543162 E9PCH4 1651 aa15.53■□□□□ 0.08
DDB1-221ENST00000543162 NEUROD1Q13562 356 aa15.52■□□□□ 0.08
DDB1-221ENST00000543162 CAMSAP1Q5T5Y3 1602 aa15.52■□□□□ 0.08
DDB1-221ENST00000543162 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
DDB1-221ENST00000543162 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
DDB1-221ENST00000543162 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
DDB1-221ENST00000543162 NPATQ14207 1427 aa15.48■□□□□ 0.07
DDB1-221ENST00000543162 ARHGAP31Q2M1Z3 1444 aa15.48■□□□□ 0.07
DDB1-221ENST00000543162 PLA2R1Q13018 1463 aa15.47■□□□□ 0.07
DDB1-221ENST00000543162 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
DDB1-221ENST00000543162 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
DDB1-221ENST00000543162 PTPRTO14522 1441 aa15.46■□□□□ 0.07
DDB1-221ENST00000543162 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
DDB1-221ENST00000543162 TRPM2O94759 1503 aa15.45■□□□□ 0.06
DDB1-221ENST00000543162 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
DDB1-221ENST00000543162 TONSLQ96HA7 1378 aa15.45■□□□□ 0.06
DDB1-221ENST00000543162 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
DDB1-221ENST00000543162 FER1L4A9Z1Z3 1794 aa15.42■□□□□ 0.06
DDB1-221ENST00000543162 MROH2AA6NES4 1674 aa15.41■□□□□ 0.06
DDB1-221ENST00000543162 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
DDB1-221ENST00000543162 NOS1P29475 1434 aa15.41■□□□□ 0.06
DDB1-221ENST00000543162 PREX1Q8TCU6 1659 aa15.4■□□□□ 0.06
DDB1-221ENST00000543162 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
DDB1-221ENST00000543162 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
DDB1-221ENST00000543162 FBXO31Q5XUX0 539 aaPredicted RBP15.38■□□□□ 0.05
DDB1-221ENST00000543162 SYNMO15061 1565 aa15.37■□□□□ 0.05
DDB1-221ENST00000543162 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
DDB1-221ENST00000543162 MADDQ8WXG6 1647 aa15.37■□□□□ 0.05
DDB1-221ENST00000543162 ADAMTSL3P82987 1691 aa15.37■□□□□ 0.05
DDB1-221ENST00000543162 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
DDB1-221ENST00000543162 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
DDB1-221ENST00000543162 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
DDB1-221ENST00000543162 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
DDB1-221ENST00000543162 KIF1BO60333 1816 aa15.34■□□□□ 0.05
DDB1-221ENST00000543162 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
DDB1-221ENST00000543162 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
DDB1-221ENST00000543162 C3P01024 1663 aa15.34■□□□□ 0.05
DDB1-221ENST00000543162 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
DDB1-221ENST00000543162 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
DDB1-221ENST00000543162 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
DDB1-221ENST00000543162 CEBPAP49715 358 aaPredicted RBP15.32■□□□□ 0.04
DDB1-221ENST00000543162 IDI1Q13907 227 aa15.32■□□□□ 0.04
DDB1-221ENST00000543162 TNRQ92752 1358 aa15.32■□□□□ 0.04
DDB1-221ENST00000543162 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
DDB1-221ENST00000543162 NEURL4Q96JN8 1562 aa15.31■□□□□ 0.04
DDB1-221ENST00000543162 DCAF11Q8TEB1 546 aa15.3■□□□□ 0.04
DDB1-221ENST00000543162 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
DDB1-221ENST00000543162 KDM2AQ9Y2K7 1162 aa15.28■□□□□ 0.04
DDB1-221ENST00000543162 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.04
DDB1-221ENST00000543162 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
DDB1-221ENST00000543162 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
DDB1-221ENST00000543162 STAC3Q96MF2 364 aa15.25■□□□□ 0.03
DDB1-221ENST00000543162 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
DDB1-221ENST00000543162 RPGRIP1LQ68CZ1 1315 aa15.24■□□□□ 0.03
DDB1-221ENST00000543162 PTPRMP28827 1452 aa15.24■□□□□ 0.03
DDB1-221ENST00000543162 MYO5BQ9ULV0 1848 aa15.23■□□□□ 0.03
DDB1-221ENST00000543162 NBPF8Q3BBV2 869 aa15.23■□□□□ 0.03
DDB1-221ENST00000543162 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
DDB1-221ENST00000543162 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
DDB1-221ENST00000543162 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
DDB1-221ENST00000543162 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
DDB1-221ENST00000543162 KDM5AP29375 1690 aaKnown RBP15.21■□□□□ 0.03
DDB1-221ENST00000543162 PPLO60437 1756 aa15.21■□□□□ 0.02
DDB1-221ENST00000543162 MYO3AQ8NEV4 1616 aa15.21■□□□□ 0.02
DDB1-221ENST00000543162 MYOM2P54296 1465 aa15.2■□□□□ 0.02
DDB1-221ENST00000543162 NEXMIFQ5QGS0 1516 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms