RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 CHIC2Q9UKJ5 165 aa25.77■■□□□ 1.72
PTPN6-221ENST00000543120 DAPK1P53355 1430 aa25.77■■□□□ 1.72
PTPN6-221ENST00000543120 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
PTPN6-221ENST00000543120 KIF15Q9NS87 1388 aa25.73■■□□□ 1.71
PTPN6-221ENST00000543120 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
PTPN6-221ENST00000543120 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
PTPN6-221ENST00000543120 DMRT2Q9Y5R5 561 aa25.69■■□□□ 1.7
PTPN6-221ENST00000543120 STRCQ7RTU9 1775 aa25.69■■□□□ 1.7
PTPN6-221ENST00000543120 DUOX2Q9NRD8 1548 aa25.68■■□□□ 1.7
PTPN6-221ENST00000543120 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
PTPN6-221ENST00000543120 NCKAP5LQ9HCH0 1330 aa25.66■■□□□ 1.7
PTPN6-221ENST00000543120 PZPP20742 1482 aa25.66■■□□□ 1.7
PTPN6-221ENST00000543120 NCOA1Q15788 1441 aa25.65■■□□□ 1.7
PTPN6-221ENST00000543120 TNRQ92752 1358 aa25.65■■□□□ 1.7
PTPN6-221ENST00000543120 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
PTPN6-221ENST00000543120 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
PTPN6-221ENST00000543120 RNF17Q9BXT8 1623 aaKnown RBP25.63■■□□□ 1.69
PTPN6-221ENST00000543120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.69
PTPN6-221ENST00000543120 ABCC3O15438 1527 aa25.63■■□□□ 1.69
PTPN6-221ENST00000543120 CROCC2H7BZ55 1655 aa25.62■■□□□ 1.69
PTPN6-221ENST00000543120 CAMSAP1Q5T5Y3 1602 aa25.62■■□□□ 1.69
PTPN6-221ENST00000543120 MROH1Q8NDA8 1641 aa25.62■■□□□ 1.69
PTPN6-221ENST00000543120 ERBINQ96RT1 1412 aa25.62■■□□□ 1.69
PTPN6-221ENST00000543120 EIF2AK4Q9P2K8 1649 aaKnown RBP25.6■■□□□ 1.69
PTPN6-221ENST00000543120 PTPRTO14522 1441 aa25.6■■□□□ 1.69
PTPN6-221ENST00000543120 MYO3AQ8NEV4 1616 aa25.59■■□□□ 1.69
PTPN6-221ENST00000543120 CERKQ8TCT0 537 aa25.59■■□□□ 1.69
PTPN6-221ENST00000543120 FBXO41Q8TF61 875 aa25.59■■□□□ 1.69
PTPN6-221ENST00000543120 CEP170BQ9Y4F5 1589 aaPredicted RBP25.58■■□□□ 1.69
PTPN6-221ENST00000543120 A2ML1A8K2U0 1454 aa25.58■■□□□ 1.69
PTPN6-221ENST00000543120 ADGRL2O95490 1459 aa25.54■■□□□ 1.68
PTPN6-221ENST00000543120 PKD2Q13563 968 aa25.54■■□□□ 1.68
PTPN6-221ENST00000543120 ZNF142P52746 1687 aaPredicted RBP25.52■■□□□ 1.68
PTPN6-221ENST00000543120 PLA2R1Q13018 1463 aa25.52■■□□□ 1.68
PTPN6-221ENST00000543120 ITGAEP38570 1179 aa25.5■■□□□ 1.67
PTPN6-221ENST00000543120 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
PTPN6-221ENST00000543120 ERVK-7P63135 1459 aa25.49■■□□□ 1.67
PTPN6-221ENST00000543120 THEMISQ8N1K5 641 aaPredicted RBP25.48■■□□□ 1.67
PTPN6-221ENST00000543120 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
PTPN6-221ENST00000543120 ARHGAP31Q2M1Z3 1444 aa25.47■■□□□ 1.67
PTPN6-221ENST00000543120 ANKRD50Q9ULJ7 1429 aa25.47■■□□□ 1.67
PTPN6-221ENST00000543120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.47■■□□□ 1.67
PTPN6-221ENST00000543120 ZC3H13Q5T200 1668 aaKnown RBP25.47■■□□□ 1.67
PTPN6-221ENST00000543120 SPATA31D1Q6ZQQ2 1576 aa25.47■■□□□ 1.67
PTPN6-221ENST00000543120 KANK1Q14678 1352 aa25.46■■□□□ 1.67
PTPN6-221ENST00000543120 CEP152O94986 1710 aa25.46■■□□□ 1.67
PTPN6-221ENST00000543120 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
PTPN6-221ENST00000543120 ZNF335Q9H4Z2 1342 aaPredicted RBP25.43■■□□□ 1.66
PTPN6-221ENST00000543120 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
PTPN6-221ENST00000543120 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
PTPN6-221ENST00000543120 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
PTPN6-221ENST00000543120 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
PTPN6-221ENST00000543120 LTBP4Q8N2S1 1624 aa25.41■■□□□ 1.66
PTPN6-221ENST00000543120 LMTK2Q8IWU2 1503 aa25.39■■□□□ 1.66
PTPN6-221ENST00000543120 IDI1Q13907 227 aa25.36■■□□□ 1.65
PTPN6-221ENST00000543120 CFAP65Q6ZU64 1925 aaKnown RBP25.34■■□□□ 1.65
PTPN6-221ENST00000543120 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
PTPN6-221ENST00000543120 NEURL4Q96JN8 1562 aa25.33■■□□□ 1.65
PTPN6-221ENST00000543120 LTKP29376 864 aa25.31■■□□□ 1.64
PTPN6-221ENST00000543120 NOS1P29475 1434 aa25.3■■□□□ 1.64
PTPN6-221ENST00000543120 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
PTPN6-221ENST00000543120 MED14O60244 1454 aa25.28■■□□□ 1.64
PTPN6-221ENST00000543120 TXNDC2Q86VQ3 553 aa25.28■■□□□ 1.64
PTPN6-221ENST00000543120 EFCAB6Q5THR3 1501 aa25.27■■□□□ 1.64
PTPN6-221ENST00000543120 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
PTPN6-221ENST00000543120 NUP155O75694 1391 aa25.25■■□□□ 1.63
PTPN6-221ENST00000543120 UBR1Q8IWV7 1749 aa25.24■■□□□ 1.63
PTPN6-221ENST00000543120 SYNMO15061 1565 aa25.24■■□□□ 1.63
PTPN6-221ENST00000543120 SLC52A1Q9NWF4 448 aa25.24■■□□□ 1.63
PTPN6-221ENST00000543120 ARHGAP23Q9P227 1491 aa25.23■■□□□ 1.63
PTPN6-221ENST00000543120 TMEM2Q9UHN6 1383 aa25.22■■□□□ 1.63
PTPN6-221ENST00000543120 POLR1AO95602 1720 aaPredicted RBP25.22■■□□□ 1.63
PTPN6-221ENST00000543120 UNC13BO14795 1591 aa25.22■■□□□ 1.63
PTPN6-221ENST00000543120 PIK3C2BO00750 1634 aa25.21■■□□□ 1.63
PTPN6-221ENST00000543120 RPRD2Q5VT52 1461 aaKnown RBP25.21■■□□□ 1.63
PTPN6-221ENST00000543120 SLIT1O75093 1534 aa25.2■■□□□ 1.62
PTPN6-221ENST00000543120 SCAF11Q99590 1463 aaKnown RBP25.2■■□□□ 1.62
PTPN6-221ENST00000543120 EID1Q9Y6B2 187 aa25.19■■□□□ 1.62
PTPN6-221ENST00000543120 IQSEC2Q5JU85 1478 aa25.18■■□□□ 1.62
PTPN6-221ENST00000543120 NAIPQ13075 1403 aa25.16■■□□□ 1.62
PTPN6-221ENST00000543120 TET3O43151 1660 aa25.16■■□□□ 1.62
PTPN6-221ENST00000543120 UBAP1LF5GYI3 381 aa25.14■■□□□ 1.62
PTPN6-221ENST00000543120 IQGAP1P46940 1657 aa25.13■■□□□ 1.61
PTPN6-221ENST00000543120 IQGAP3Q86VI3 1631 aa25.12■■□□□ 1.61
PTPN6-221ENST00000543120 ADGRB3O60242 1522 aa25.09■■□□□ 1.61
PTPN6-221ENST00000543120 CPS1P31327 1500 aa25.09■■□□□ 1.61
PTPN6-221ENST00000543120 CHGAP10645 457 aaKnown RBP25.09■■□□□ 1.61
PTPN6-221ENST00000543120 E9PCH4 1651 aa25.09■■□□□ 1.61
PTPN6-221ENST00000543120 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.61
PTPN6-221ENST00000543120 SENP3Q9H4L4 574 aaPredicted RBP25.08■■□□□ 1.61
PTPN6-221ENST00000543120 GCC2Q8IWJ2 1684 aa25.07■■□□□ 1.6
PTPN6-221ENST00000543120 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
PTPN6-221ENST00000543120 KDM5AP29375 1690 aaKnown RBP25.06■■□□□ 1.6
PTPN6-221ENST00000543120 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
PTPN6-221ENST00000543120 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
PTPN6-221ENST00000543120 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
PTPN6-221ENST00000543120 RIMS2Q9UQ26 1411 aa25.02■■□□□ 1.6
PTPN6-221ENST00000543120 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
PTPN6-221ENST00000543120 TMEM131LA2VDJ0 1609 aa25.01■■□□□ 1.59
PTPN6-221ENST00000543120 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms