RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 LMTK3Q96Q04 1460 aa15.11■□□□□ 0.01
TNFRSF1A-214ENST00000543048 KIF3BO15066 747 aa15.1■□□□□ 0.01
TNFRSF1A-214ENST00000543048 ZMYM3Q14202 1370 aa15.1■□□□□ 0.01
TNFRSF1A-214ENST00000543048 PTPN23Q9H3S7 1636 aa15.1■□□□□ 0.01
TNFRSF1A-214ENST00000543048 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
TNFRSF1A-214ENST00000543048 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
TNFRSF1A-214ENST00000543048 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-214ENST00000543048 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
TNFRSF1A-214ENST00000543048 HSPA2P54652 639 aa15.08■□□□□ 0
TNFRSF1A-214ENST00000543048 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
TNFRSF1A-214ENST00000543048 RNF39Q9H2S5 420 aa15.05■□□□□ -0
TNFRSF1A-214ENST00000543048 TCOF1Q13428 1488 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-214ENST00000543048 ABCC5O15440 1437 aa15.04■□□□□ -0
TNFRSF1A-214ENST00000543048 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
TNFRSF1A-214ENST00000543048 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
TNFRSF1A-214ENST00000543048 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
TNFRSF1A-214ENST00000543048 DNMT1P26358 1616 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-214ENST00000543048 DAPK1P53355 1430 aa15.01□□□□□ -0.01
TNFRSF1A-214ENST00000543048 NPATQ14207 1427 aa15.01□□□□□ -0.01
TNFRSF1A-214ENST00000543048 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-214ENST00000543048 RRP7BPQ9NSQ0 103 aa15.01□□□□□ -0.01
TNFRSF1A-214ENST00000543048 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-214ENST00000543048 SLC4A2P04920 1241 aa15□□□□□ -0.01
TNFRSF1A-214ENST00000543048 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
TNFRSF1A-214ENST00000543048 SHANK2Q9UPX8 1470 aa15□□□□□ -0.01
TNFRSF1A-214ENST00000543048 DUOX2Q9NRD8 1548 aa14.99□□□□□ -0.01
TNFRSF1A-214ENST00000543048 PTPRKQ15262 1439 aa14.99□□□□□ -0.01
TNFRSF1A-214ENST00000543048 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-214ENST00000543048 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-214ENST00000543048 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
TNFRSF1A-214ENST00000543048 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-214ENST00000543048 STRCQ7RTU9 1775 aa14.97□□□□□ -0.01
TNFRSF1A-214ENST00000543048 ANKRD30AQ9BXX3 1397 aa14.97□□□□□ -0.01
TNFRSF1A-214ENST00000543048 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
TNFRSF1A-214ENST00000543048 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.02
TNFRSF1A-214ENST00000543048 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-214ENST00000543048 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
TNFRSF1A-214ENST00000543048 ERBINQ96RT1 1412 aa14.92□□□□□ -0.02
TNFRSF1A-214ENST00000543048 PZPP20742 1482 aa14.92□□□□□ -0.02
TNFRSF1A-214ENST00000543048 ZC3H13Q5T200 1668 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-214ENST00000543048 CEP152O94986 1710 aa14.91□□□□□ -0.02
TNFRSF1A-214ENST00000543048 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
TNFRSF1A-214ENST00000543048 TNRQ92752 1358 aa14.9□□□□□ -0.02
TNFRSF1A-214ENST00000543048 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
TNFRSF1A-214ENST00000543048 ABCC3O15438 1527 aa14.9□□□□□ -0.02
TNFRSF1A-214ENST00000543048 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-214ENST00000543048 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
TNFRSF1A-214ENST00000543048 CAMSAP1Q5T5Y3 1602 aa14.89□□□□□ -0.03
TNFRSF1A-214ENST00000543048 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-214ENST00000543048 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-214ENST00000543048 A2ML1A8K2U0 1454 aa14.88□□□□□ -0.03
TNFRSF1A-214ENST00000543048 KANK1Q14678 1352 aa14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 PTPRTO14522 1441 aa14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 DEPDC5O75140 1603 aa14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
TNFRSF1A-214ENST00000543048 ITGAEP38570 1179 aa14.86□□□□□ -0.03
TNFRSF1A-214ENST00000543048 PKD2Q13563 968 aa14.86□□□□□ -0.03
TNFRSF1A-214ENST00000543048 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-214ENST00000543048 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-214ENST00000543048 PRDM15P57071 1507 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-214ENST00000543048 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
TNFRSF1A-214ENST00000543048 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-214ENST00000543048 ROCK1Q13464 1354 aa14.84□□□□□ -0.03
TNFRSF1A-214ENST00000543048 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
TNFRSF1A-214ENST00000543048 SPATA31D1Q6ZQQ2 1576 aa14.83□□□□□ -0.04
TNFRSF1A-214ENST00000543048 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
TNFRSF1A-214ENST00000543048 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
TNFRSF1A-214ENST00000543048 CERKQ8TCT0 537 aa14.82□□□□□ -0.04
TNFRSF1A-214ENST00000543048 ERVK-7P63135 1459 aa14.82□□□□□ -0.04
TNFRSF1A-214ENST00000543048 FBXO41Q8TF61 875 aa14.81□□□□□ -0.04
TNFRSF1A-214ENST00000543048 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
TNFRSF1A-214ENST00000543048 ANKLE2Q86XL3 938 aa14.8□□□□□ -0.04
TNFRSF1A-214ENST00000543048 LMTK2Q8IWU2 1503 aa14.8□□□□□ -0.04
TNFRSF1A-214ENST00000543048 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
TNFRSF1A-214ENST00000543048 RRBP1Q9P2E9 1410 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1A-214ENST00000543048 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-214ENST00000543048 UBR1Q8IWV7 1749 aa14.75□□□□□ -0.05
TNFRSF1A-214ENST00000543048 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
TNFRSF1A-214ENST00000543048 TET3O43151 1660 aa14.74□□□□□ -0.05
TNFRSF1A-214ENST00000543048 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
TNFRSF1A-214ENST00000543048 UNC13BO14795 1591 aa14.73□□□□□ -0.05
TNFRSF1A-214ENST00000543048 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
TNFRSF1A-214ENST00000543048 IDI1Q13907 227 aa14.73□□□□□ -0.05
TNFRSF1A-214ENST00000543048 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
TNFRSF1A-214ENST00000543048 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
TNFRSF1A-214ENST00000543048 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
TNFRSF1A-214ENST00000543048 NUP155O75694 1391 aa14.72□□□□□ -0.05
TNFRSF1A-214ENST00000543048 RPRD2Q5VT52 1461 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-214ENST00000543048 PIK3C2BO00750 1634 aa14.71□□□□□ -0.05
TNFRSF1A-214ENST00000543048 NOS1P29475 1434 aa14.71□□□□□ -0.05
TNFRSF1A-214ENST00000543048 MED14O60244 1454 aa14.7□□□□□ -0.06
TNFRSF1A-214ENST00000543048 ZNF335Q9H4Z2 1342 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-214ENST00000543048 NEURL4Q96JN8 1562 aa14.7□□□□□ -0.06
TNFRSF1A-214ENST00000543048 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
TNFRSF1A-214ENST00000543048 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
TNFRSF1A-214ENST00000543048 KDM5AP29375 1690 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-214ENST00000543048 ZBTB22O15209 634 aa14.69□□□□□ -0.06
TNFRSF1A-214ENST00000543048 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms