RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 DEPDC5O75140 1603 aa17.88■□□□□ 0.45
C2CD3-217ENST00000542452 MYO3AQ8NEV4 1616 aa17.88■□□□□ 0.45
C2CD3-217ENST00000542452 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
C2CD3-217ENST00000542452 KIF3BO15066 747 aa17.88■□□□□ 0.45
C2CD3-217ENST00000542452 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
C2CD3-217ENST00000542452 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
C2CD3-217ENST00000542452 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
C2CD3-217ENST00000542452 ABCC3O15438 1527 aa17.87■□□□□ 0.45
C2CD3-217ENST00000542452 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
C2CD3-217ENST00000542452 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
C2CD3-217ENST00000542452 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
C2CD3-217ENST00000542452 HSPA2P54652 639 aa17.85■□□□□ 0.45
C2CD3-217ENST00000542452 NPATQ14207 1427 aa17.85■□□□□ 0.45
C2CD3-217ENST00000542452 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
C2CD3-217ENST00000542452 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
C2CD3-217ENST00000542452 NCOA1Q15788 1441 aa17.84■□□□□ 0.45
C2CD3-217ENST00000542452 UHRF1BP1Q6BDS2 1440 aa17.84■□□□□ 0.45
C2CD3-217ENST00000542452 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
C2CD3-217ENST00000542452 CHIC2Q9UKJ5 165 aa17.83■□□□□ 0.44
C2CD3-217ENST00000542452 RRP7BPQ9NSQ0 103 aa17.82■□□□□ 0.44
C2CD3-217ENST00000542452 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
C2CD3-217ENST00000542452 PZPP20742 1482 aa17.82■□□□□ 0.44
C2CD3-217ENST00000542452 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
C2CD3-217ENST00000542452 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
C2CD3-217ENST00000542452 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
C2CD3-217ENST00000542452 VWDEQ8N2E2 1590 aa17.79■□□□□ 0.44
C2CD3-217ENST00000542452 CEP170BQ9Y4F5 1589 aaPredicted RBP17.79■□□□□ 0.44
C2CD3-217ENST00000542452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
C2CD3-217ENST00000542452 SPATA31D1Q6ZQQ2 1576 aa17.76■□□□□ 0.43
C2CD3-217ENST00000542452 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
C2CD3-217ENST00000542452 UNC13BO14795 1591 aa17.74■□□□□ 0.43
C2CD3-217ENST00000542452 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
C2CD3-217ENST00000542452 ANKRD50Q9ULJ7 1429 aa17.73■□□□□ 0.43
C2CD3-217ENST00000542452 LMTK2Q8IWU2 1503 aa17.73■□□□□ 0.43
C2CD3-217ENST00000542452 ROCK1Q13464 1354 aa17.73■□□□□ 0.43
C2CD3-217ENST00000542452 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
C2CD3-217ENST00000542452 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
C2CD3-217ENST00000542452 TNRQ92752 1358 aa17.72■□□□□ 0.43
C2CD3-217ENST00000542452 A2ML1A8K2U0 1454 aa17.71■□□□□ 0.43
C2CD3-217ENST00000542452 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
C2CD3-217ENST00000542452 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
C2CD3-217ENST00000542452 GCC2Q8IWJ2 1684 aa17.68■□□□□ 0.42
C2CD3-217ENST00000542452 ITGAEP38570 1179 aa17.67■□□□□ 0.42
C2CD3-217ENST00000542452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
C2CD3-217ENST00000542452 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
C2CD3-217ENST00000542452 TET3O43151 1660 aa17.66■□□□□ 0.42
C2CD3-217ENST00000542452 SYNMO15061 1565 aa17.66■□□□□ 0.42
C2CD3-217ENST00000542452 IQGAP3Q86VI3 1631 aa17.65■□□□□ 0.42
C2CD3-217ENST00000542452 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
C2CD3-217ENST00000542452 POLR1AO95602 1720 aaPredicted RBP17.65■□□□□ 0.42
C2CD3-217ENST00000542452 UBR1Q8IWV7 1749 aa17.64■□□□□ 0.41
C2CD3-217ENST00000542452 KANK1Q14678 1352 aa17.64■□□□□ 0.41
C2CD3-217ENST00000542452 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
C2CD3-217ENST00000542452 UGGT1Q9NYU2 1555 aa17.62■□□□□ 0.41
C2CD3-217ENST00000542452 E9PCH4 1651 aa17.62■□□□□ 0.41
C2CD3-217ENST00000542452 PIK3C2BO00750 1634 aa17.61■□□□□ 0.41
C2CD3-217ENST00000542452 PTPRTO14522 1441 aa17.61■□□□□ 0.41
C2CD3-217ENST00000542452 NAIPQ13075 1403 aa17.6■□□□□ 0.41
C2CD3-217ENST00000542452 NOS1P29475 1434 aa17.59■□□□□ 0.41
C2CD3-217ENST00000542452 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.4
C2CD3-217ENST00000542452 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
C2CD3-217ENST00000542452 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
C2CD3-217ENST00000542452 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
C2CD3-217ENST00000542452 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
C2CD3-217ENST00000542452 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
C2CD3-217ENST00000542452 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
C2CD3-217ENST00000542452 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
C2CD3-217ENST00000542452 SLIT1O75093 1534 aa17.52■□□□□ 0.39
C2CD3-217ENST00000542452 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
C2CD3-217ENST00000542452 NUP155O75694 1391 aa17.51■□□□□ 0.39
C2CD3-217ENST00000542452 PKD2Q13563 968 aa17.5■□□□□ 0.39
C2CD3-217ENST00000542452 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
C2CD3-217ENST00000542452 MED14O60244 1454 aa17.5■□□□□ 0.39
C2CD3-217ENST00000542452 SPHKAPQ2M3C7 1700 aa17.5■□□□□ 0.39
C2CD3-217ENST00000542452 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
C2CD3-217ENST00000542452 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
C2CD3-217ENST00000542452 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
C2CD3-217ENST00000542452 IDI1Q13907 227 aa17.46■□□□□ 0.39
C2CD3-217ENST00000542452 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
C2CD3-217ENST00000542452 ZNF335Q9H4Z2 1342 aaPredicted RBP17.45■□□□□ 0.38
C2CD3-217ENST00000542452 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
C2CD3-217ENST00000542452 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
C2CD3-217ENST00000542452 TMEM2Q9UHN6 1383 aa17.43■□□□□ 0.38
C2CD3-217ENST00000542452 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
C2CD3-217ENST00000542452 CERKQ8TCT0 537 aa17.42■□□□□ 0.38
C2CD3-217ENST00000542452 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
C2CD3-217ENST00000542452 LTKP29376 864 aa17.41■□□□□ 0.38
C2CD3-217ENST00000542452 TRPM2O94759 1503 aa17.41■□□□□ 0.38
C2CD3-217ENST00000542452 ZFYVE9O95405 1425 aa17.39■□□□□ 0.38
C2CD3-217ENST00000542452 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
C2CD3-217ENST00000542452 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
C2CD3-217ENST00000542452 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
C2CD3-217ENST00000542452 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
C2CD3-217ENST00000542452 CPS1P31327 1500 aa17.34■□□□□ 0.37
C2CD3-217ENST00000542452 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
C2CD3-217ENST00000542452 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
C2CD3-217ENST00000542452 SETD5Q9C0A6 1442 aa17.33■□□□□ 0.36
C2CD3-217ENST00000542452 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
C2CD3-217ENST00000542452 KIF1BO60333 1816 aa17.33■□□□□ 0.36
C2CD3-217ENST00000542452 XIRP1Q702N8 1843 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms