RNA–Protein interactions for RNA: ENST00000542411.5

CYB561A3-218, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-218ENST00000542411 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
CYB561A3-218ENST00000542411 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
CYB561A3-218ENST00000542411 KANK1Q14678 1352 aa17.15■□□□□ 0.34
CYB561A3-218ENST00000542411 ADGRL2O95490 1459 aa17.14■□□□□ 0.33
CYB561A3-218ENST00000542411 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
CYB561A3-218ENST00000542411 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
CYB561A3-218ENST00000542411 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
CYB561A3-218ENST00000542411 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
CYB561A3-218ENST00000542411 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.32
CYB561A3-218ENST00000542411 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
CYB561A3-218ENST00000542411 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
CYB561A3-218ENST00000542411 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
CYB561A3-218ENST00000542411 NPATQ14207 1427 aa17.06■□□□□ 0.32
CYB561A3-218ENST00000542411 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
CYB561A3-218ENST00000542411 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
CYB561A3-218ENST00000542411 FBXO31Q5XUX0 539 aaPredicted RBP17.03■□□□□ 0.32
CYB561A3-218ENST00000542411 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
CYB561A3-218ENST00000542411 MROH2AA6NES4 1674 aa17.02■□□□□ 0.32
CYB561A3-218ENST00000542411 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.31
CYB561A3-218ENST00000542411 HSPA2P54652 639 aa17■□□□□ 0.31
CYB561A3-218ENST00000542411 C3P01024 1663 aa17■□□□□ 0.31
CYB561A3-218ENST00000542411 ABCC3O15438 1527 aa17■□□□□ 0.31
CYB561A3-218ENST00000542411 TNRQ92752 1358 aa17■□□□□ 0.31
CYB561A3-218ENST00000542411 PZPP20742 1482 aa16.99■□□□□ 0.31
CYB561A3-218ENST00000542411 NUP155O75694 1391 aa16.99■□□□□ 0.31
CYB561A3-218ENST00000542411 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
CYB561A3-218ENST00000542411 SETD1BQ9UPS6 1966 aaKnown RBP16.98■□□□□ 0.31
CYB561A3-218ENST00000542411 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
CYB561A3-218ENST00000542411 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
CYB561A3-218ENST00000542411 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
CYB561A3-218ENST00000542411 NAIPQ13075 1403 aa16.96■□□□□ 0.3
CYB561A3-218ENST00000542411 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.3
CYB561A3-218ENST00000542411 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-218ENST00000542411 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
CYB561A3-218ENST00000542411 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
CYB561A3-218ENST00000542411 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
CYB561A3-218ENST00000542411 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
CYB561A3-218ENST00000542411 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
CYB561A3-218ENST00000542411 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
CYB561A3-218ENST00000542411 LMTK2Q8IWU2 1503 aa16.92■□□□□ 0.3
CYB561A3-218ENST00000542411 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
CYB561A3-218ENST00000542411 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
CYB561A3-218ENST00000542411 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
CYB561A3-218ENST00000542411 NLRP1Q9C000 1473 aa16.89■□□□□ 0.29
CYB561A3-218ENST00000542411 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.29
CYB561A3-218ENST00000542411 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
CYB561A3-218ENST00000542411 A2ML1A8K2U0 1454 aa16.88■□□□□ 0.29
CYB561A3-218ENST00000542411 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-218ENST00000542411 RPRD2Q5VT52 1461 aaKnown RBP16.87■□□□□ 0.29
CYB561A3-218ENST00000542411 PKD2Q13563 968 aa16.87■□□□□ 0.29
CYB561A3-218ENST00000542411 CEP152O94986 1710 aa16.87■□□□□ 0.29
CYB561A3-218ENST00000542411 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
CYB561A3-218ENST00000542411 UNC13BO14795 1591 aa16.86■□□□□ 0.29
CYB561A3-218ENST00000542411 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
CYB561A3-218ENST00000542411 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
CYB561A3-218ENST00000542411 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
CYB561A3-218ENST00000542411 IDI1Q13907 227 aa16.84■□□□□ 0.29
CYB561A3-218ENST00000542411 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
CYB561A3-218ENST00000542411 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 NOS1P29475 1434 aa16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
CYB561A3-218ENST00000542411 TET3O43151 1660 aa16.81■□□□□ 0.28
CYB561A3-218ENST00000542411 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
CYB561A3-218ENST00000542411 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
CYB561A3-218ENST00000542411 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
CYB561A3-218ENST00000542411 HRCP23327 699 aa16.8■□□□□ 0.28
CYB561A3-218ENST00000542411 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
CYB561A3-218ENST00000542411 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
CYB561A3-218ENST00000542411 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
CYB561A3-218ENST00000542411 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
CYB561A3-218ENST00000542411 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
CYB561A3-218ENST00000542411 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
CYB561A3-218ENST00000542411 PTPRTO14522 1441 aa16.76■□□□□ 0.27
CYB561A3-218ENST00000542411 BCANQ96GW7 911 aa16.74■□□□□ 0.27
CYB561A3-218ENST00000542411 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
CYB561A3-218ENST00000542411 TMEM2Q9UHN6 1383 aa16.73■□□□□ 0.27
CYB561A3-218ENST00000542411 PPP1R15AO75807 674 aaPredicted RBP16.72■□□□□ 0.27
CYB561A3-218ENST00000542411 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
CYB561A3-218ENST00000542411 SYNMO15061 1565 aa16.71■□□□□ 0.27
CYB561A3-218ENST00000542411 E9PCH4 1651 aa16.71■□□□□ 0.27
CYB561A3-218ENST00000542411 FOXD1Q16676 465 aa16.7■□□□□ 0.26
CYB561A3-218ENST00000542411 LTKP29376 864 aa16.69■□□□□ 0.26
CYB561A3-218ENST00000542411 NPHP4O75161 1426 aaPredicted RBP16.69■□□□□ 0.26
CYB561A3-218ENST00000542411 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
CYB561A3-218ENST00000542411 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-218ENST00000542411 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
CYB561A3-218ENST00000542411 ADGRB3O60242 1522 aa16.66■□□□□ 0.26
CYB561A3-218ENST00000542411 SLIT1O75093 1534 aa16.66■□□□□ 0.26
CYB561A3-218ENST00000542411 ARHGAP23Q9P227 1491 aa16.66■□□□□ 0.26
CYB561A3-218ENST00000542411 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
CYB561A3-218ENST00000542411 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
CYB561A3-218ENST00000542411 MED14O60244 1454 aa16.65■□□□□ 0.26
CYB561A3-218ENST00000542411 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
CYB561A3-218ENST00000542411 KDM5AP29375 1690 aaKnown RBP16.63■□□□□ 0.25
CYB561A3-218ENST00000542411 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
CYB561A3-218ENST00000542411 TRPM2O94759 1503 aa16.63■□□□□ 0.25
CYB561A3-218ENST00000542411 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms