RNA–Protein interactions for RNA: ENST00000541542.1

CCND2-204, Transcript of cyclin D2, humanhuman

TSL 3

Gene CCND2, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND2-204ENST00000541542 CPS1P31327 1500 aa13.18□□□□□ -0.3
CCND2-204ENST00000541542 SHANK2Q9UPX8 1470 aa13.17□□□□□ -0.3
CCND2-204ENST00000541542 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
CCND2-204ENST00000541542 PZPP20742 1482 aa13.16□□□□□ -0.3
CCND2-204ENST00000541542 EHBP1L1Q8N3D4 1523 aa13.16□□□□□ -0.3
CCND2-204ENST00000541542 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
CCND2-204ENST00000541542 TNRQ92752 1358 aa13.16□□□□□ -0.3
CCND2-204ENST00000541542 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
CCND2-204ENST00000541542 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
CCND2-204ENST00000541542 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
CCND2-204ENST00000541542 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
CCND2-204ENST00000541542 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
CCND2-204ENST00000541542 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
CCND2-204ENST00000541542 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
CCND2-204ENST00000541542 DEPDC5O75140 1603 aa13.13□□□□□ -0.31
CCND2-204ENST00000541542 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
CCND2-204ENST00000541542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCND2-204ENST00000541542 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
CCND2-204ENST00000541542 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
CCND2-204ENST00000541542 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
CCND2-204ENST00000541542 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
CCND2-204ENST00000541542 MED14O60244 1454 aa13.1□□□□□ -0.31
CCND2-204ENST00000541542 NPHP4O75161 1426 aaPredicted RBP13.1□□□□□ -0.31
CCND2-204ENST00000541542 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
CCND2-204ENST00000541542 KIF3BO15066 747 aa13.09□□□□□ -0.31
CCND2-204ENST00000541542 NLRP1Q9C000 1473 aa13.09□□□□□ -0.31
CCND2-204ENST00000541542 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.31
CCND2-204ENST00000541542 SYNMO15061 1565 aa13.08□□□□□ -0.32
CCND2-204ENST00000541542 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
CCND2-204ENST00000541542 TOM1O60784 492 aa13.08□□□□□ -0.32
CCND2-204ENST00000541542 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
CCND2-204ENST00000541542 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
CCND2-204ENST00000541542 ABCC3O15438 1527 aa13.07□□□□□ -0.32
CCND2-204ENST00000541542 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
CCND2-204ENST00000541542 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
CCND2-204ENST00000541542 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
CCND2-204ENST00000541542 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
CCND2-204ENST00000541542 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
CCND2-204ENST00000541542 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
CCND2-204ENST00000541542 CEP152O94986 1710 aa13.05□□□□□ -0.32
CCND2-204ENST00000541542 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
CCND2-204ENST00000541542 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
CCND2-204ENST00000541542 THEMISQ8N1K5 641 aaPredicted RBP13.02□□□□□ -0.33
CCND2-204ENST00000541542 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
CCND2-204ENST00000541542 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
CCND2-204ENST00000541542 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
CCND2-204ENST00000541542 MAST1Q9Y2H9 1570 aa13.01□□□□□ -0.33
CCND2-204ENST00000541542 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
CCND2-204ENST00000541542 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
CCND2-204ENST00000541542 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
CCND2-204ENST00000541542 SLIT1O75093 1534 aa12.97□□□□□ -0.33
CCND2-204ENST00000541542 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
CCND2-204ENST00000541542 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
CCND2-204ENST00000541542 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
CCND2-204ENST00000541542 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
CCND2-204ENST00000541542 LTKP29376 864 aa12.93□□□□□ -0.34
CCND2-204ENST00000541542 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
CCND2-204ENST00000541542 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
CCND2-204ENST00000541542 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
CCND2-204ENST00000541542 TSPY4P0CV99 314 aa12.91□□□□□ -0.34
CCND2-204ENST00000541542 TSPY10P0CW01 314 aa12.91□□□□□ -0.34
CCND2-204ENST00000541542 ROBO1Q9Y6N7 1651 aa12.91□□□□□ -0.34
CCND2-204ENST00000541542 DUOX2Q9NRD8 1548 aa12.91□□□□□ -0.34
CCND2-204ENST00000541542 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
CCND2-204ENST00000541542 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
CCND2-204ENST00000541542 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
CCND2-204ENST00000541542 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
CCND2-204ENST00000541542 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
CCND2-204ENST00000541542 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
CCND2-204ENST00000541542 TMEM2Q9UHN6 1383 aa12.87□□□□□ -0.35
CCND2-204ENST00000541542 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
CCND2-204ENST00000541542 TET3O43151 1660 aa12.86□□□□□ -0.35
CCND2-204ENST00000541542 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
CCND2-204ENST00000541542 KIF15Q9NS87 1388 aa12.86□□□□□ -0.35
CCND2-204ENST00000541542 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
CCND2-204ENST00000541542 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
CCND2-204ENST00000541542 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
CCND2-204ENST00000541542 ERBINQ96RT1 1412 aa12.85□□□□□ -0.35
CCND2-204ENST00000541542 ADGRB3O60242 1522 aa12.83□□□□□ -0.35
CCND2-204ENST00000541542 ABCC5O15440 1437 aa12.83□□□□□ -0.36
CCND2-204ENST00000541542 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
CCND2-204ENST00000541542 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
CCND2-204ENST00000541542 PTPN23Q9H3S7 1636 aa12.82□□□□□ -0.36
CCND2-204ENST00000541542 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
CCND2-204ENST00000541542 LMTK2Q8IWU2 1503 aa12.82□□□□□ -0.36
CCND2-204ENST00000541542 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
CCND2-204ENST00000541542 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
CCND2-204ENST00000541542 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
CCND2-204ENST00000541542 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
CCND2-204ENST00000541542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCND2-204ENST00000541542 RRP7BPQ9NSQ0 103 aa12.79□□□□□ -0.36
CCND2-204ENST00000541542 NOS1P29475 1434 aa12.79□□□□□ -0.36
CCND2-204ENST00000541542 DAPK1P53355 1430 aa12.79□□□□□ -0.36
CCND2-204ENST00000541542 LRP6O75581 1613 aa12.78□□□□□ -0.36
CCND2-204ENST00000541542 KCNA6P17658 529 aa12.78□□□□□ -0.36
CCND2-204ENST00000541542 IDI1Q13907 227 aa12.78□□□□□ -0.36
CCND2-204ENST00000541542 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
CCND2-204ENST00000541542 GCC2Q8IWJ2 1684 aa12.77□□□□□ -0.36
CCND2-204ENST00000541542 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
CCND2-204ENST00000541542 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms