RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.93
MSRB3-210ENST00000541189 ADAMTSL3P82987 1691 aa20.84■□□□□ 0.93
MSRB3-210ENST00000541189 CNTLNQ9NXG0 1405 aa20.83■□□□□ 0.93
MSRB3-210ENST00000541189 SETD5Q9C0A6 1442 aa20.82■□□□□ 0.92
MSRB3-210ENST00000541189 KANK1Q14678 1352 aa20.82■□□□□ 0.92
MSRB3-210ENST00000541189 RNF17Q9BXT8 1623 aaKnown RBP20.81■□□□□ 0.92
MSRB3-210ENST00000541189 ACIN1Q9UKV3 1341 aaKnown RBP20.8■□□□□ 0.92
MSRB3-210ENST00000541189 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
MSRB3-210ENST00000541189 HRCP23327 699 aa20.78■□□□□ 0.92
MSRB3-210ENST00000541189 NUP155O75694 1391 aa20.77■□□□□ 0.92
MSRB3-210ENST00000541189 ZMYM3Q14202 1370 aa20.77■□□□□ 0.92
MSRB3-210ENST00000541189 MROH1Q8NDA8 1641 aa20.77■□□□□ 0.92
MSRB3-210ENST00000541189 MADDQ8WXG6 1647 aa20.77■□□□□ 0.92
MSRB3-210ENST00000541189 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
MSRB3-210ENST00000541189 KDM5DQ9BY66 1539 aa20.77■□□□□ 0.92
MSRB3-210ENST00000541189 GCC2Q8IWJ2 1684 aa20.76■□□□□ 0.91
MSRB3-210ENST00000541189 PTPRMP28827 1452 aa20.75■□□□□ 0.91
MSRB3-210ENST00000541189 DEPDC5O75140 1603 aa20.75■□□□□ 0.91
MSRB3-210ENST00000541189 CEBPAP49715 358 aaPredicted RBP20.74■□□□□ 0.91
MSRB3-210ENST00000541189 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
MSRB3-210ENST00000541189 ABCC3O15438 1527 aa20.73■□□□□ 0.91
MSRB3-210ENST00000541189 RAB3GAP2Q9H2M9 1393 aa20.73■□□□□ 0.91
MSRB3-210ENST00000541189 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
MSRB3-210ENST00000541189 LMTK2Q8IWU2 1503 aa20.72■□□□□ 0.91
MSRB3-210ENST00000541189 UNC13BO14795 1591 aa20.72■□□□□ 0.91
MSRB3-210ENST00000541189 FER1L4A9Z1Z3 1794 aa20.7■□□□□ 0.9
MSRB3-210ENST00000541189 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
MSRB3-210ENST00000541189 RIMS1Q86UR5 1692 aaKnown RBP20.69■□□□□ 0.9
MSRB3-210ENST00000541189 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
MSRB3-210ENST00000541189 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
MSRB3-210ENST00000541189 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
MSRB3-210ENST00000541189 FBXO31Q5XUX0 539 aaPredicted RBP20.66■□□□□ 0.9
MSRB3-210ENST00000541189 PZPP20742 1482 aa20.66■□□□□ 0.9
MSRB3-210ENST00000541189 MROH2AA6NES4 1674 aa20.66■□□□□ 0.9
MSRB3-210ENST00000541189 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
MSRB3-210ENST00000541189 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
MSRB3-210ENST00000541189 PCGF6Q9BYE7 350 aa20.65■□□□□ 0.9
MSRB3-210ENST00000541189 NPATQ14207 1427 aa20.64■□□□□ 0.89
MSRB3-210ENST00000541189 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.89
MSRB3-210ENST00000541189 MPHOSPH9Q99550 1183 aa20.63■□□□□ 0.89
MSRB3-210ENST00000541189 RPRD2Q5VT52 1461 aaKnown RBP20.61■□□□□ 0.89
MSRB3-210ENST00000541189 EFCAB6Q5THR3 1501 aa20.6■□□□□ 0.89
MSRB3-210ENST00000541189 PKD2Q13563 968 aa20.6■□□□□ 0.89
MSRB3-210ENST00000541189 C3P01024 1663 aa20.6■□□□□ 0.89
MSRB3-210ENST00000541189 CAMSAP1Q5T5Y3 1602 aa20.6■□□□□ 0.89
MSRB3-210ENST00000541189 CEP152O94986 1710 aa20.59■□□□□ 0.89
MSRB3-210ENST00000541189 TET3O43151 1660 aa20.58■□□□□ 0.89
MSRB3-210ENST00000541189 TNRQ92752 1358 aa20.58■□□□□ 0.88
MSRB3-210ENST00000541189 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
MSRB3-210ENST00000541189 NOS1P29475 1434 aa20.55■□□□□ 0.88
MSRB3-210ENST00000541189 SPATA31D1Q6ZQQ2 1576 aa20.54■□□□□ 0.88
MSRB3-210ENST00000541189 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
MSRB3-210ENST00000541189 PTPRTO14522 1441 aa20.52■□□□□ 0.87
MSRB3-210ENST00000541189 IDI1Q13907 227 aa20.5■□□□□ 0.87
MSRB3-210ENST00000541189 FOXD1Q16676 465 aa20.5■□□□□ 0.87
MSRB3-210ENST00000541189 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
MSRB3-210ENST00000541189 E9PCH4 1651 aa20.49■□□□□ 0.87
MSRB3-210ENST00000541189 NLRP1Q9C000 1473 aa20.49■□□□□ 0.87
MSRB3-210ENST00000541189 SETD1BQ9UPS6 1966 aaKnown RBP20.48■□□□□ 0.87
MSRB3-210ENST00000541189 PREX1Q8TCU6 1659 aa20.47■□□□□ 0.87
MSRB3-210ENST00000541189 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
MSRB3-210ENST00000541189 A2ML1A8K2U0 1454 aa20.44■□□□□ 0.86
MSRB3-210ENST00000541189 SYNMO15061 1565 aa20.43■□□□□ 0.86
MSRB3-210ENST00000541189 THEMISQ8N1K5 641 aaPredicted RBP20.43■□□□□ 0.86
MSRB3-210ENST00000541189 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
MSRB3-210ENST00000541189 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
MSRB3-210ENST00000541189 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
MSRB3-210ENST00000541189 TRPM2O94759 1503 aa20.4■□□□□ 0.86
MSRB3-210ENST00000541189 MYO3AQ8NEV4 1616 aa20.39■□□□□ 0.86
MSRB3-210ENST00000541189 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
MSRB3-210ENST00000541189 HSPA2P54652 639 aa20.39■□□□□ 0.85
MSRB3-210ENST00000541189 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.85
MSRB3-210ENST00000541189 CEP170BQ9Y4F5 1589 aaPredicted RBP20.38■□□□□ 0.85
MSRB3-210ENST00000541189 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
MSRB3-210ENST00000541189 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
MSRB3-210ENST00000541189 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
MSRB3-210ENST00000541189 PIK3C2BO00750 1634 aa20.35■□□□□ 0.85
MSRB3-210ENST00000541189 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
MSRB3-210ENST00000541189 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
MSRB3-210ENST00000541189 HDGFP51858 240 aaKnown RBP20.31■□□□□ 0.84
MSRB3-210ENST00000541189 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
MSRB3-210ENST00000541189 ADGRB3O60242 1522 aa20.31■□□□□ 0.84
MSRB3-210ENST00000541189 TMEM2Q9UHN6 1383 aa20.31■□□□□ 0.84
MSRB3-210ENST00000541189 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
MSRB3-210ENST00000541189 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
MSRB3-210ENST00000541189 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
MSRB3-210ENST00000541189 TXNDC2Q86VQ3 553 aa20.28■□□□□ 0.84
MSRB3-210ENST00000541189 ARHGAP23Q9P227 1491 aa20.28■□□□□ 0.84
MSRB3-210ENST00000541189 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
MSRB3-210ENST00000541189 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.84
MSRB3-210ENST00000541189 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
MSRB3-210ENST00000541189 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.84
MSRB3-210ENST00000541189 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
MSRB3-210ENST00000541189 SLIT1O75093 1534 aa20.27■□□□□ 0.83
MSRB3-210ENST00000541189 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
MSRB3-210ENST00000541189 LTKP29376 864 aa20.26■□□□□ 0.83
MSRB3-210ENST00000541189 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
MSRB3-210ENST00000541189 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
MSRB3-210ENST00000541189 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
MSRB3-210ENST00000541189 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms