RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 FER1L4A9Z1Z3 1794 aa22.47■■□□□ 1.19
MDM1-210ENST00000540418 RNF17Q9BXT8 1623 aaKnown RBP22.47■■□□□ 1.19
MDM1-210ENST00000540418 WASHC2CQ9Y4E1 1318 aa22.47■■□□□ 1.19
MDM1-210ENST00000540418 NAIPQ13075 1403 aa22.46■■□□□ 1.19
MDM1-210ENST00000540418 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
MDM1-210ENST00000540418 RIMS1Q86UR5 1692 aaKnown RBP22.45■■□□□ 1.19
MDM1-210ENST00000540418 HFM1A2PYH4 1435 aa22.45■■□□□ 1.19
MDM1-210ENST00000540418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.18
MDM1-210ENST00000540418 FAM135AQ9P2D6 1515 aa22.43■■□□□ 1.18
MDM1-210ENST00000540418 MROH1Q8NDA8 1641 aa22.42■■□□□ 1.18
MDM1-210ENST00000540418 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
MDM1-210ENST00000540418 KANK1Q14678 1352 aa22.42■■□□□ 1.18
MDM1-210ENST00000540418 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
MDM1-210ENST00000540418 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
MDM1-210ENST00000540418 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
MDM1-210ENST00000540418 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
MDM1-210ENST00000540418 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
MDM1-210ENST00000540418 CLTCQ00610 1675 aaKnown RBP22.39■■□□□ 1.17
MDM1-210ENST00000540418 GCC2Q8IWJ2 1684 aa22.38■■□□□ 1.17
MDM1-210ENST00000540418 ABCC3O15438 1527 aa22.37■■□□□ 1.17
MDM1-210ENST00000540418 MROH2AA6NES4 1674 aa22.37■■□□□ 1.17
MDM1-210ENST00000540418 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
MDM1-210ENST00000540418 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
MDM1-210ENST00000540418 ZC3H13Q5T200 1668 aaKnown RBP22.34■■□□□ 1.17
MDM1-210ENST00000540418 UNC13BO14795 1591 aa22.34■■□□□ 1.17
MDM1-210ENST00000540418 NUP155O75694 1391 aa22.33■■□□□ 1.17
MDM1-210ENST00000540418 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
MDM1-210ENST00000540418 C3P01024 1663 aa22.33■■□□□ 1.16
MDM1-210ENST00000540418 LMTK2Q8IWU2 1503 aa22.32■■□□□ 1.16
MDM1-210ENST00000540418 PZPP20742 1482 aa22.29■■□□□ 1.16
MDM1-210ENST00000540418 CEP152O94986 1710 aa22.29■■□□□ 1.16
MDM1-210ENST00000540418 NPATQ14207 1427 aa22.29■■□□□ 1.16
MDM1-210ENST00000540418 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
MDM1-210ENST00000540418 ARHGAP31Q2M1Z3 1444 aa22.28■■□□□ 1.16
MDM1-210ENST00000540418 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
MDM1-210ENST00000540418 ACIN1Q9UKV3 1341 aaKnown RBP22.27■■□□□ 1.16
MDM1-210ENST00000540418 CAMSAP1Q5T5Y3 1602 aa22.27■■□□□ 1.15
MDM1-210ENST00000540418 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
MDM1-210ENST00000540418 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
MDM1-210ENST00000540418 HRCP23327 699 aa22.23■■□□□ 1.15
MDM1-210ENST00000540418 EFCAB6Q5THR3 1501 aa22.22■■□□□ 1.15
MDM1-210ENST00000540418 TET3O43151 1660 aa22.21■■□□□ 1.15
MDM1-210ENST00000540418 TNRQ92752 1358 aa22.2■■□□□ 1.14
MDM1-210ENST00000540418 ERVK-7P63135 1459 aa22.19■■□□□ 1.14
MDM1-210ENST00000540418 RPRD2Q5VT52 1461 aaKnown RBP22.19■■□□□ 1.14
MDM1-210ENST00000540418 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
MDM1-210ENST00000540418 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
MDM1-210ENST00000540418 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
MDM1-210ENST00000540418 UHRF1BP1Q6BDS2 1440 aa22.17■■□□□ 1.14
MDM1-210ENST00000540418 MPHOSPH9Q99550 1183 aa22.15■■□□□ 1.14
MDM1-210ENST00000540418 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.14
MDM1-210ENST00000540418 PKD2Q13563 968 aa22.14■■□□□ 1.14
MDM1-210ENST00000540418 LMTK3Q96Q04 1460 aa22.14■■□□□ 1.13
MDM1-210ENST00000540418 NOS1P29475 1434 aa22.14■■□□□ 1.13
MDM1-210ENST00000540418 E9PCH4 1651 aa22.13■■□□□ 1.13
MDM1-210ENST00000540418 NLRP1Q9C000 1473 aa22.11■■□□□ 1.13
MDM1-210ENST00000540418 CFAP65Q6ZU64 1925 aaKnown RBP22.11■■□□□ 1.13
MDM1-210ENST00000540418 MYO3AQ8NEV4 1616 aa22.1■■□□□ 1.13
MDM1-210ENST00000540418 SLC52A1Q9NWF4 448 aa22.09■■□□□ 1.13
MDM1-210ENST00000540418 A2ML1A8K2U0 1454 aa22.08■■□□□ 1.13
MDM1-210ENST00000540418 HSPA2P54652 639 aa22.07■■□□□ 1.12
MDM1-210ENST00000540418 IDI1Q13907 227 aa22.07■■□□□ 1.12
MDM1-210ENST00000540418 SYNMO15061 1565 aa22.07■■□□□ 1.12
MDM1-210ENST00000540418 PTPRTO14522 1441 aa22.06■■□□□ 1.12
MDM1-210ENST00000540418 CEP170BQ9Y4F5 1589 aaPredicted RBP22.06■■□□□ 1.12
MDM1-210ENST00000540418 FOXD1Q16676 465 aa22.05■■□□□ 1.12
MDM1-210ENST00000540418 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
MDM1-210ENST00000540418 THEMISQ8N1K5 641 aaPredicted RBP22.04■■□□□ 1.12
MDM1-210ENST00000540418 ZNF142P52746 1687 aaPredicted RBP22.04■■□□□ 1.12
MDM1-210ENST00000540418 UGGT1Q9NYU2 1555 aa22.01■■□□□ 1.11
MDM1-210ENST00000540418 STAG3Q9UJ98 1225 aa22.01■■□□□ 1.11
MDM1-210ENST00000540418 PLA2R1Q13018 1463 aa22■■□□□ 1.11
MDM1-210ENST00000540418 SPHKAPQ2M3C7 1700 aa21.99■■□□□ 1.11
MDM1-210ENST00000540418 TRPM2O94759 1503 aa21.97■■□□□ 1.11
MDM1-210ENST00000540418 PIK3C2BO00750 1634 aa21.97■■□□□ 1.11
MDM1-210ENST00000540418 CHGAP10645 457 aaKnown RBP21.95■■□□□ 1.1
MDM1-210ENST00000540418 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
MDM1-210ENST00000540418 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
MDM1-210ENST00000540418 ADGRB3O60242 1522 aa21.92■■□□□ 1.1
MDM1-210ENST00000540418 ANKLE2Q86XL3 938 aa21.91■■□□□ 1.1
MDM1-210ENST00000540418 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 ANKRD30BQ9BXX2 1392 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 CLTCL1P53675 1640 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 TMEM2Q9UHN6 1383 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 TMEM131LA2VDJ0 1609 aa21.9■■□□□ 1.1
MDM1-210ENST00000540418 SLIT1O75093 1534 aa21.88■■□□□ 1.09
MDM1-210ENST00000540418 ARHGAP23Q9P227 1491 aa21.88■■□□□ 1.09
MDM1-210ENST00000540418 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
MDM1-210ENST00000540418 EID1Q9Y6B2 187 aa21.87■■□□□ 1.09
MDM1-210ENST00000540418 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
MDM1-210ENST00000540418 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
MDM1-210ENST00000540418 STRCQ7RTU9 1775 aa21.86■■□□□ 1.09
MDM1-210ENST00000540418 LTKP29376 864 aa21.85■■□□□ 1.09
MDM1-210ENST00000540418 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
MDM1-210ENST00000540418 ZNF326Q5BKZ1 582 aaKnown RBP21.84■■□□□ 1.09
MDM1-210ENST00000540418 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.82■■□□□ 1.08
MDM1-210ENST00000540418 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
MDM1-210ENST00000540418 SCAF11Q99590 1463 aaKnown RBP21.82■■□□□ 1.08
MDM1-210ENST00000540418 ZFYVE9O95405 1425 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms