RNA–Protein interactions for RNA: ENST00000540156.1

KDM5A-205, Transcript of lysine demethylase 5A, humanhuman

TSL 3

Gene KDM5A, Length 516 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-205ENST00000540156 CLIP1P30622 1438 aa10.78□□□□□ -0.68
KDM5A-205ENST00000540156 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
KDM5A-205ENST00000540156 A2MP01023 1474 aa10.77□□□□□ -0.69
KDM5A-205ENST00000540156 ZNF777Q9ULD5 760 aaPredicted RBP10.77□□□□□ -0.69
KDM5A-205ENST00000540156 PLXNC1O60486 1568 aa10.77□□□□□ -0.69
KDM5A-205ENST00000540156 UGGT1Q9NYU2 1555 aa10.75□□□□□ -0.69
KDM5A-205ENST00000540156 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
KDM5A-205ENST00000540156 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
KDM5A-205ENST00000540156 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
KDM5A-205ENST00000540156 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
KDM5A-205ENST00000540156 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
KDM5A-205ENST00000540156 LRRIQ1Q96JM4 1722 aa10.74□□□□□ -0.69
KDM5A-205ENST00000540156 SYCP2Q9BX26 1530 aa10.73□□□□□ -0.69
KDM5A-205ENST00000540156 ZC3H13Q5T200 1668 aaKnown RBP10.71□□□□□ -0.69
KDM5A-205ENST00000540156 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
KDM5A-205ENST00000540156 ZNF772Q68DY9 489 aaPredicted RBP10.71□□□□□ -0.69
KDM5A-205ENST00000540156 MIA2Q96PC5 1412 aa10.71□□□□□ -0.69
KDM5A-205ENST00000540156 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
KDM5A-205ENST00000540156 PHLPP1O60346 1717 aa10.7□□□□□ -0.7
KDM5A-205ENST00000540156 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
KDM5A-205ENST00000540156 PZPP20742 1482 aa10.7□□□□□ -0.7
KDM5A-205ENST00000540156 NLRP1Q9C000 1473 aa10.7□□□□□ -0.7
KDM5A-205ENST00000540156 RXRBP28702 533 aa10.7□□□□□ -0.7
KDM5A-205ENST00000540156 JCADQ9P266 1359 aa10.69□□□□□ -0.7
KDM5A-205ENST00000540156 MEX3CQ5U5Q3 659 aaKnown RBP10.69□□□□□ -0.7
KDM5A-205ENST00000540156 LRP6O75581 1613 aa10.66□□□□□ -0.7
KDM5A-205ENST00000540156 WASHC2CQ9Y4E1 1318 aa10.66□□□□□ -0.7
KDM5A-205ENST00000540156 KDM5DQ9BY66 1539 aa10.65□□□□□ -0.7
KDM5A-205ENST00000540156 CFAP65Q6ZU64 1925 aaKnown RBP10.65□□□□□ -0.7
KDM5A-205ENST00000540156 KIF3BO15066 747 aa10.65□□□□□ -0.7
KDM5A-205ENST00000540156 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
KDM5A-205ENST00000540156 TMEM94Q12767 1356 aa10.65□□□□□ -0.71
KDM5A-205ENST00000540156 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
KDM5A-205ENST00000540156 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
KDM5A-205ENST00000540156 LTKP29376 864 aa10.63□□□□□ -0.71
KDM5A-205ENST00000540156 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
KDM5A-205ENST00000540156 SETBP1Q9Y6X0 1596 aa10.63□□□□□ -0.71
KDM5A-205ENST00000540156 DHX29Q7Z478 1369 aaKnown RBP10.63□□□□□ -0.71
KDM5A-205ENST00000540156 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
KDM5A-205ENST00000540156 LRRC9Q6ZRR7 1453 aa10.62□□□□□ -0.71
KDM5A-205ENST00000540156 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
KDM5A-205ENST00000540156 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
KDM5A-205ENST00000540156 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
KDM5A-205ENST00000540156 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
KDM5A-205ENST00000540156 ARHGAP35Q9NRY4 1499 aa10.61□□□□□ -0.71
KDM5A-205ENST00000540156 NUTM2BA6NNL0 878 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 NUTM2EB1AL46 878 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 NUTM2AQ8IVF1 878 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
KDM5A-205ENST00000540156 SLAIN2Q9P270 581 aa10.61□□□□□ -0.71
KDM5A-205ENST00000540156 CFDP1Q9UEE9 299 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
KDM5A-205ENST00000540156 UBR1Q8IWV7 1749 aa10.61□□□□□ -0.71
KDM5A-205ENST00000540156 PLEKHH2Q8IVE3 1493 aa10.61□□□□□ -0.71
KDM5A-205ENST00000540156 MAP3K1Q13233 1512 aa10.6□□□□□ -0.71
KDM5A-205ENST00000540156 FOXD1Q16676 465 aa10.6□□□□□ -0.71
KDM5A-205ENST00000540156 KCNA6P17658 529 aa10.58□□□□□ -0.72
KDM5A-205ENST00000540156 RGS12O14924 1447 aa10.58□□□□□ -0.72
KDM5A-205ENST00000540156 AFF2P51816 1311 aa10.58□□□□□ -0.72
KDM5A-205ENST00000540156 CCDC18Q5T9S5 1454 aa10.57□□□□□ -0.72
KDM5A-205ENST00000540156 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
KDM5A-205ENST00000540156 EID1Q9Y6B2 187 aa10.57□□□□□ -0.72
KDM5A-205ENST00000540156 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
KDM5A-205ENST00000540156 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
KDM5A-205ENST00000540156 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
KDM5A-205ENST00000540156 MSH6P52701 1360 aa10.56□□□□□ -0.72
KDM5A-205ENST00000540156 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
KDM5A-205ENST00000540156 EEA1Q15075 1411 aa10.56□□□□□ -0.72
KDM5A-205ENST00000540156 ZNF644Q9H582 1327 aaPredicted RBP10.56□□□□□ -0.72
KDM5A-205ENST00000540156 ARHGAP23Q9P227 1491 aa10.55□□□□□ -0.72
KDM5A-205ENST00000540156 SLIT1O75093 1534 aa10.55□□□□□ -0.72
KDM5A-205ENST00000540156 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
KDM5A-205ENST00000540156 QTRT2Q9H974 415 aaKnown RBP10.55□□□□□ -0.72
KDM5A-205ENST00000540156 ERVK-7P63135 1459 aa10.55□□□□□ -0.72
KDM5A-205ENST00000540156 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
KDM5A-205ENST00000540156 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
KDM5A-205ENST00000540156 CCNB3Q8WWL7 1395 aa10.53□□□□□ -0.72
KDM5A-205ENST00000540156 SLC26A8Q96RN1 970 aa10.53□□□□□ -0.72
KDM5A-205ENST00000540156 MBD5Q9P267 1494 aa10.53□□□□□ -0.72
KDM5A-205ENST00000540156 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.72
KDM5A-205ENST00000540156 CASKIN1Q8WXD9 1431 aa10.52□□□□□ -0.73
KDM5A-205ENST00000540156 ABCC3O15438 1527 aa10.51□□□□□ -0.73
KDM5A-205ENST00000540156 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
KDM5A-205ENST00000540156 AHDC1Q5TGY3 1603 aaPredicted RBP10.5□□□□□ -0.73
KDM5A-205ENST00000540156 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
KDM5A-205ENST00000540156 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
KDM5A-205ENST00000540156 EP400Q96L91 3159 aa10.49□□□□□ -0.73
KDM5A-205ENST00000540156 CEP152O94986 1710 aa10.49□□□□□ -0.73
KDM5A-205ENST00000540156 TMEM2Q9UHN6 1383 aa10.49□□□□□ -0.73
KDM5A-205ENST00000540156 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
KDM5A-205ENST00000540156 TET3O43151 1660 aa10.48□□□□□ -0.73
KDM5A-205ENST00000540156 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
KDM5A-205ENST00000540156 STAG3Q9UJ98 1225 aa10.48□□□□□ -0.73
KDM5A-205ENST00000540156 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
KDM5A-205ENST00000540156 PIK3C2BO00750 1634 aa10.47□□□□□ -0.73
KDM5A-205ENST00000540156 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
KDM5A-205ENST00000540156 BCANQ96GW7 911 aa10.46□□□□□ -0.73
KDM5A-205ENST00000540156 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
KDM5A-205ENST00000540156 LRP5O75197 1615 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms