RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 FBXO31Q5XUX0 539 aaPredicted RBP32.03■■■□□ 2.72
LPCAT3-210ENST00000540090 CCDC141Q6ZP82 1450 aa31.99■■■□□ 2.71
LPCAT3-210ENST00000540090 DNMT1P26358 1616 aaKnown RBP31.99■■■□□ 2.71
LPCAT3-210ENST00000540090 TNRQ92752 1358 aa31.98■■■□□ 2.71
LPCAT3-210ENST00000540090 WASHC2CQ9Y4E1 1318 aa31.97■■■□□ 2.71
LPCAT3-210ENST00000540090 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
LPCAT3-210ENST00000540090 PZPP20742 1482 aa31.94■■■□□ 2.7
LPCAT3-210ENST00000540090 CAMSAP2Q08AD1 1489 aa31.93■■■□□ 2.7
LPCAT3-210ENST00000540090 FAM135AQ9P2D6 1515 aa31.92■■■□□ 2.7
LPCAT3-210ENST00000540090 KDM5DQ9BY66 1539 aa31.91■■■□□ 2.7
LPCAT3-210ENST00000540090 TSPY4P0CV99 314 aa31.9■■■□□ 2.7
LPCAT3-210ENST00000540090 TSPY10P0CW01 314 aa31.9■■■□□ 2.7
LPCAT3-210ENST00000540090 ANKLE2Q86XL3 938 aa31.89■■■□□ 2.7
LPCAT3-210ENST00000540090 THEMISQ8N1K5 641 aaPredicted RBP31.89■■■□□ 2.7
LPCAT3-210ENST00000540090 MIA2Q96PC5 1412 aa31.88■■■□□ 2.69
LPCAT3-210ENST00000540090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.85■■■□□ 2.69
LPCAT3-210ENST00000540090 NEURL4Q96JN8 1562 aa31.84■■■□□ 2.69
LPCAT3-210ENST00000540090 SHANK2Q9UPX8 1470 aa31.84■■■□□ 2.69
LPCAT3-210ENST00000540090 ARHGEF5Q12774 1597 aa31.82■■■□□ 2.68
LPCAT3-210ENST00000540090 CPS1P31327 1500 aa31.82■■■□□ 2.68
LPCAT3-210ENST00000540090 TOM1O60784 492 aa31.82■■■□□ 2.68
LPCAT3-210ENST00000540090 NLRP1Q9C000 1473 aa31.82■■■□□ 2.68
LPCAT3-210ENST00000540090 HSPA1LP34931 641 aa31.78■■■□□ 2.68
LPCAT3-210ENST00000540090 PIP4K2BP78356 416 aa31.78■■■□□ 2.68
LPCAT3-210ENST00000540090 POLR1AO95602 1720 aaPredicted RBP31.77■■■□□ 2.68
LPCAT3-210ENST00000540090 SCAF1Q9H7N4 1312 aaKnown RBP31.76■■■□□ 2.68
LPCAT3-210ENST00000540090 UGGT1Q9NYU2 1555 aa31.76■■■□□ 2.67
LPCAT3-210ENST00000540090 MED14O60244 1454 aa31.75■■■□□ 2.67
LPCAT3-210ENST00000540090 NPHP4O75161 1426 aaPredicted RBP31.74■■■□□ 2.67
LPCAT3-210ENST00000540090 LRRC9Q6ZRR7 1453 aa31.73■■■□□ 2.67
LPCAT3-210ENST00000540090 VWDEQ8N2E2 1590 aa31.71■■■□□ 2.67
LPCAT3-210ENST00000540090 DEPDC5O75140 1603 aa31.68■■■□□ 2.66
LPCAT3-210ENST00000540090 VPS8Q8N3P4 1428 aa31.68■■■□□ 2.66
LPCAT3-210ENST00000540090 ABCC3O15438 1527 aa31.68■■■□□ 2.66
LPCAT3-210ENST00000540090 MAST1Q9Y2H9 1570 aa31.67■■■□□ 2.66
LPCAT3-210ENST00000540090 KANK4Q5T7N3 995 aaPredicted RBP31.66■■■□□ 2.66
LPCAT3-210ENST00000540090 RNF17Q9BXT8 1623 aaKnown RBP31.66■■■□□ 2.66
LPCAT3-210ENST00000540090 LOC105371045A0A1W2PR82 267 aa31.62■■■□□ 2.65
LPCAT3-210ENST00000540090 ERVK-7P63135 1459 aa31.62■■■□□ 2.65
LPCAT3-210ENST00000540090 MAP3K1Q13233 1512 aa31.59■■■□□ 2.65
LPCAT3-210ENST00000540090 ZC3H13Q5T200 1668 aaKnown RBP31.58■■■□□ 2.65
LPCAT3-210ENST00000540090 EIF2AK4Q9P2K8 1649 aaKnown RBP31.58■■■□□ 2.65
LPCAT3-210ENST00000540090 MYOM3Q5VTT5 1437 aa31.58■■■□□ 2.65
LPCAT3-210ENST00000540090 IQGAP1P46940 1657 aa31.56■■■□□ 2.64
LPCAT3-210ENST00000540090 MROH1Q8NDA8 1641 aa31.56■■■□□ 2.64
LPCAT3-210ENST00000540090 ALKQ9UM73 1620 aa31.56■■■□□ 2.64
LPCAT3-210ENST00000540090 MED1Q15648 1581 aaPredicted RBP31.55■■■□□ 2.64
LPCAT3-210ENST00000540090 LRRC7Q96NW7 1537 aa31.54■■■□□ 2.64
LPCAT3-210ENST00000540090 DUOX2Q9NRD8 1548 aa31.52■■■□□ 2.64
LPCAT3-210ENST00000540090 LTKP29376 864 aa31.5■■■□□ 2.63
LPCAT3-210ENST00000540090 TXNDC2Q86VQ3 553 aa31.49■■■□□ 2.63
LPCAT3-210ENST00000540090 ARHGAP31Q2M1Z3 1444 aa31.49■■■□□ 2.63
LPCAT3-210ENST00000540090 SCAF11Q99590 1463 aaKnown RBP31.47■■■□□ 2.63
LPCAT3-210ENST00000540090 KIF15Q9NS87 1388 aa31.47■■■□□ 2.63
LPCAT3-210ENST00000540090 STRCP1A6NGW2 1772 aa31.47■■■□□ 2.63
LPCAT3-210ENST00000540090 RRP7BPQ9NSQ0 103 aa31.46■■■□□ 2.63
LPCAT3-210ENST00000540090 ARHGAP23Q9P227 1491 aa31.45■■■□□ 2.62
LPCAT3-210ENST00000540090 UBR1Q8IWV7 1749 aa31.44■■■□□ 2.62
LPCAT3-210ENST00000540090 ABCC5O15440 1437 aa31.44■■■□□ 2.62
LPCAT3-210ENST00000540090 CEP152O94986 1710 aa31.44■■■□□ 2.62
LPCAT3-210ENST00000540090 ERBINQ96RT1 1412 aa31.42■■■□□ 2.62
LPCAT3-210ENST00000540090 PHF23Q9BUL5 403 aaPredicted RBP31.42■■■□□ 2.62
LPCAT3-210ENST00000540090 SLIT1O75093 1534 aa31.42■■■□□ 2.62
LPCAT3-210ENST00000540090 CFAP65Q6ZU64 1925 aaKnown RBP31.41■■■□□ 2.62
LPCAT3-210ENST00000540090 EID1Q9Y6B2 187 aa31.41■■■□□ 2.62
LPCAT3-210ENST00000540090 SYNMO15061 1565 aa31.4■■■□□ 2.62
LPCAT3-210ENST00000540090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.4■■■□□ 2.62
LPCAT3-210ENST00000540090 PRDM15P57071 1507 aaPredicted RBP31.39■■■□□ 2.62
LPCAT3-210ENST00000540090 SENP3Q9H4L4 574 aaPredicted RBP31.38■■■□□ 2.61
LPCAT3-210ENST00000540090 TMEM2Q9UHN6 1383 aa31.34■■■□□ 2.61
LPCAT3-210ENST00000540090 KANK1Q14678 1352 aa31.33■■■□□ 2.61
LPCAT3-210ENST00000540090 DAPK1P53355 1430 aa31.32■■■□□ 2.61
LPCAT3-210ENST00000540090 APLP2Q06481 763 aa31.32■■■□□ 2.6
LPCAT3-210ENST00000540090 STAG3Q9UJ98 1225 aa31.32■■■□□ 2.6
LPCAT3-210ENST00000540090 IDI1Q13907 227 aa31.31■■■□□ 2.6
LPCAT3-210ENST00000540090 PTPN23Q9H3S7 1636 aa31.3■■■□□ 2.6
LPCAT3-210ENST00000540090 CROCC2H7BZ55 1655 aa31.26■■■□□ 2.6
LPCAT3-210ENST00000540090 CHIC2Q9UKJ5 165 aa31.26■■■□□ 2.59
LPCAT3-210ENST00000540090 ANKRD30AQ9BXX3 1397 aa31.26■■■□□ 2.59
LPCAT3-210ENST00000540090 FGD6Q6ZV73 1430 aa31.25■■■□□ 2.59
LPCAT3-210ENST00000540090 PIK3C2BO00750 1634 aa31.25■■■□□ 2.59
LPCAT3-210ENST00000540090 LMTK2Q8IWU2 1503 aa31.24■■■□□ 2.59
LPCAT3-210ENST00000540090 KCNA6P17658 529 aa31.24■■■□□ 2.59
LPCAT3-210ENST00000540090 FAM135BQ49AJ0 1406 aa31.23■■■□□ 2.59
LPCAT3-210ENST00000540090 EFCAB6Q5THR3 1501 aa31.21■■■□□ 2.59
LPCAT3-210ENST00000540090 TMEM94Q12767 1356 aa31.2■■■□□ 2.59
LPCAT3-210ENST00000540090 RGS17Q9UGC6 210 aaPredicted RBP31.2■■■□□ 2.59
LPCAT3-210ENST00000540090 NOS1P29475 1434 aa31.18■■■□□ 2.58
LPCAT3-210ENST00000540090 SLC26A8Q96RN1 970 aa31.18■■■□□ 2.58
LPCAT3-210ENST00000540090 XIRP1Q702N8 1843 aaKnown RBP31.18■■■□□ 2.58
LPCAT3-210ENST00000540090 KDM5AP29375 1690 aaKnown RBP31.17■■■□□ 2.58
LPCAT3-210ENST00000540090 SLC52A1Q9NWF4 448 aa31.17■■■□□ 2.58
LPCAT3-210ENST00000540090 PROSER2Q86WR7 435 aaPredicted RBP31.15■■■□□ 2.58
LPCAT3-210ENST00000540090 TET3O43151 1660 aa31.15■■■□□ 2.58
LPCAT3-210ENST00000540090 RBM33Q96EV2 1170 aaKnown RBP31.11■■■□□ 2.57
LPCAT3-210ENST00000540090 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
LPCAT3-210ENST00000540090 ADGRB3O60242 1522 aa31.06■■■□□ 2.56
LPCAT3-210ENST00000540090 BCANQ96GW7 911 aa31.05■■■□□ 2.56
LPCAT3-210ENST00000540090 NKTRP30414 1462 aaKnown RBP31.02■■■□□ 2.56
LPCAT3-210ENST00000540090 RPRD2Q5VT52 1461 aaKnown RBP31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms