RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 DHX29Q7Z478 1369 aaKnown RBP19.67■□□□□ 0.74
RFX4-206ENST00000539967 KIF3BO15066 747 aa19.65■□□□□ 0.74
RFX4-206ENST00000539967 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
RFX4-206ENST00000539967 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
RFX4-206ENST00000539967 HFM1A2PYH4 1435 aa19.63■□□□□ 0.73
RFX4-206ENST00000539967 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
RFX4-206ENST00000539967 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
RFX4-206ENST00000539967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.73
RFX4-206ENST00000539967 GGT6Q6P531 493 aa19.61■□□□□ 0.73
RFX4-206ENST00000539967 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
RFX4-206ENST00000539967 RAB3GAP2Q9H2M9 1393 aa19.6■□□□□ 0.73
RFX4-206ENST00000539967 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.73
RFX4-206ENST00000539967 REREQ9P2R6 1566 aa19.58■□□□□ 0.73
RFX4-206ENST00000539967 CFAP65Q6ZU64 1925 aaKnown RBP19.58■□□□□ 0.72
RFX4-206ENST00000539967 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
RFX4-206ENST00000539967 CEP152O94986 1710 aa19.56■□□□□ 0.72
RFX4-206ENST00000539967 BCORL1Q5H9F3 1711 aa19.55■□□□□ 0.72
RFX4-206ENST00000539967 AGLP35573 1532 aa19.55■□□□□ 0.72
RFX4-206ENST00000539967 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
RFX4-206ENST00000539967 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
RFX4-206ENST00000539967 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
RFX4-206ENST00000539967 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
RFX4-206ENST00000539967 UNC13BO14795 1591 aa19.51■□□□□ 0.71
RFX4-206ENST00000539967 CLTCQ00610 1675 aaKnown RBP19.5■□□□□ 0.71
RFX4-206ENST00000539967 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
RFX4-206ENST00000539967 NUP155O75694 1391 aa19.48■□□□□ 0.71
RFX4-206ENST00000539967 FER1L4A9Z1Z3 1794 aa19.48■□□□□ 0.71
RFX4-206ENST00000539967 ADAMTSL3P82987 1691 aa19.47■□□□□ 0.71
RFX4-206ENST00000539967 RIMS1Q86UR5 1692 aaKnown RBP19.47■□□□□ 0.71
RFX4-206ENST00000539967 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
RFX4-206ENST00000539967 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
RFX4-206ENST00000539967 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
RFX4-206ENST00000539967 PZPP20742 1482 aa19.46■□□□□ 0.71
RFX4-206ENST00000539967 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
RFX4-206ENST00000539967 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
RFX4-206ENST00000539967 ABCC3O15438 1527 aa19.44■□□□□ 0.7
RFX4-206ENST00000539967 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
RFX4-206ENST00000539967 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
RFX4-206ENST00000539967 FAM135AQ9P2D6 1515 aa19.42■□□□□ 0.7
RFX4-206ENST00000539967 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
RFX4-206ENST00000539967 E9PCH4 1651 aa19.4■□□□□ 0.7
RFX4-206ENST00000539967 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
RFX4-206ENST00000539967 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
RFX4-206ENST00000539967 C3P01024 1663 aa19.38■□□□□ 0.69
RFX4-206ENST00000539967 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
RFX4-206ENST00000539967 KDM5DQ9BY66 1539 aa19.38■□□□□ 0.69
RFX4-206ENST00000539967 KANK1Q14678 1352 aa19.37■□□□□ 0.69
RFX4-206ENST00000539967 PKD2Q13563 968 aa19.37■□□□□ 0.69
RFX4-206ENST00000539967 TET3O43151 1660 aa19.36■□□□□ 0.69
RFX4-206ENST00000539967 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
RFX4-206ENST00000539967 ZMYM3Q14202 1370 aa19.35■□□□□ 0.69
RFX4-206ENST00000539967 HRCP23327 699 aa19.35■□□□□ 0.69
RFX4-206ENST00000539967 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
RFX4-206ENST00000539967 ZC3H13Q5T200 1668 aaKnown RBP19.33■□□□□ 0.69
RFX4-206ENST00000539967 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
RFX4-206ENST00000539967 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
RFX4-206ENST00000539967 NPATQ14207 1427 aa19.33■□□□□ 0.68
RFX4-206ENST00000539967 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
RFX4-206ENST00000539967 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
RFX4-206ENST00000539967 MROH2AA6NES4 1674 aa19.31■□□□□ 0.68
RFX4-206ENST00000539967 PTPRMP28827 1452 aa19.3■□□□□ 0.68
RFX4-206ENST00000539967 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
RFX4-206ENST00000539967 UGGT1Q9NYU2 1555 aa19.29■□□□□ 0.68
RFX4-206ENST00000539967 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
RFX4-206ENST00000539967 SPHKAPQ2M3C7 1700 aa19.26■□□□□ 0.67
RFX4-206ENST00000539967 KCNA4P22459 653 aa19.26■□□□□ 0.67
RFX4-206ENST00000539967 SYNMO15061 1565 aa19.26■□□□□ 0.67
RFX4-206ENST00000539967 CNTLNQ9NXG0 1405 aa19.25■□□□□ 0.67
RFX4-206ENST00000539967 ERVK-7P63135 1459 aa19.24■□□□□ 0.67
RFX4-206ENST00000539967 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
RFX4-206ENST00000539967 ARHGAP31Q2M1Z3 1444 aa19.23■□□□□ 0.67
RFX4-206ENST00000539967 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
RFX4-206ENST00000539967 CLTCL1P53675 1640 aa19.21■□□□□ 0.67
RFX4-206ENST00000539967 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
RFX4-206ENST00000539967 NOS1P29475 1434 aa19.2■□□□□ 0.66
RFX4-206ENST00000539967 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
RFX4-206ENST00000539967 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
RFX4-206ENST00000539967 PTPRTO14522 1441 aa19.18■□□□□ 0.66
RFX4-206ENST00000539967 IDI1Q13907 227 aa19.18■□□□□ 0.66
RFX4-206ENST00000539967 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
RFX4-206ENST00000539967 TNRQ92752 1358 aa19.18■□□□□ 0.66
RFX4-206ENST00000539967 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
RFX4-206ENST00000539967 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
RFX4-206ENST00000539967 SETD1BQ9UPS6 1966 aaKnown RBP19.16■□□□□ 0.66
RFX4-206ENST00000539967 PIK3C2BO00750 1634 aa19.15■□□□□ 0.66
RFX4-206ENST00000539967 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
RFX4-206ENST00000539967 TRPM2O94759 1503 aa19.14■□□□□ 0.65
RFX4-206ENST00000539967 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
RFX4-206ENST00000539967 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
RFX4-206ENST00000539967 KIF1BO60333 1816 aa19.11■□□□□ 0.65
RFX4-206ENST00000539967 RGL3Q3MIN7 710 aa19.1■□□□□ 0.65
RFX4-206ENST00000539967 NUTM2DQ5VT03 806 aaPredicted RBP19.09■□□□□ 0.65
RFX4-206ENST00000539967 UBR1Q8IWV7 1749 aa19.08■□□□□ 0.65
RFX4-206ENST00000539967 HSPA2P54652 639 aa19.08■□□□□ 0.64
RFX4-206ENST00000539967 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
RFX4-206ENST00000539967 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
RFX4-206ENST00000539967 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
RFX4-206ENST00000539967 SLC52A1Q9NWF4 448 aa19.03■□□□□ 0.64
RFX4-206ENST00000539967 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
RFX4-206ENST00000539967 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms