RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
UBE3B-211ENST00000539843 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
UBE3B-211ENST00000539843 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
UBE3B-211ENST00000539843 PLA2R1Q13018 1463 aa24■■□□□ 1.43
UBE3B-211ENST00000539843 ZNF142P52746 1687 aaPredicted RBP24■■□□□ 1.43
UBE3B-211ENST00000539843 KANK4Q5T7N3 995 aaPredicted RBP23.98■■□□□ 1.43
UBE3B-211ENST00000539843 TNRQ92752 1358 aa23.96■■□□□ 1.43
UBE3B-211ENST00000539843 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
UBE3B-211ENST00000539843 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
UBE3B-211ENST00000539843 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.42
UBE3B-211ENST00000539843 PZPP20742 1482 aa23.94■■□□□ 1.42
UBE3B-211ENST00000539843 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
UBE3B-211ENST00000539843 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
UBE3B-211ENST00000539843 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
UBE3B-211ENST00000539843 LTBP4Q8N2S1 1624 aa23.88■■□□□ 1.41
UBE3B-211ENST00000539843 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
UBE3B-211ENST00000539843 DNMT1P26358 1616 aaKnown RBP23.86■■□□□ 1.41
UBE3B-211ENST00000539843 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
UBE3B-211ENST00000539843 NLRP1Q9C000 1473 aa23.86■■□□□ 1.41
UBE3B-211ENST00000539843 DUOX2Q9NRD8 1548 aa23.85■■□□□ 1.41
UBE3B-211ENST00000539843 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
UBE3B-211ENST00000539843 ZC3H13Q5T200 1668 aaKnown RBP23.85■■□□□ 1.41
UBE3B-211ENST00000539843 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
UBE3B-211ENST00000539843 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
UBE3B-211ENST00000539843 KIF15Q9NS87 1388 aa23.82■■□□□ 1.4
UBE3B-211ENST00000539843 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
UBE3B-211ENST00000539843 ABCC3O15438 1527 aa23.81■■□□□ 1.4
UBE3B-211ENST00000539843 PTPN23Q9H3S7 1636 aa23.81■■□□□ 1.4
UBE3B-211ENST00000539843 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
UBE3B-211ENST00000539843 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
UBE3B-211ENST00000539843 FGD6Q6ZV73 1430 aa23.78■■□□□ 1.4
UBE3B-211ENST00000539843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.77■■□□□ 1.4
UBE3B-211ENST00000539843 ABCC5O15440 1437 aa23.76■■□□□ 1.39
UBE3B-211ENST00000539843 DAPK1P53355 1430 aa23.76■■□□□ 1.39
UBE3B-211ENST00000539843 RRP7BPQ9NSQ0 103 aa23.76■■□□□ 1.39
UBE3B-211ENST00000539843 KANK1Q14678 1352 aa23.76■■□□□ 1.39
UBE3B-211ENST00000539843 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
UBE3B-211ENST00000539843 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
UBE3B-211ENST00000539843 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
UBE3B-211ENST00000539843 CROCC2H7BZ55 1655 aa23.74■■□□□ 1.39
UBE3B-211ENST00000539843 UBAP1LF5GYI3 381 aa23.74■■□□□ 1.39
UBE3B-211ENST00000539843 ERVK-7P63135 1459 aa23.74■■□□□ 1.39
UBE3B-211ENST00000539843 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
UBE3B-211ENST00000539843 CPS1P31327 1500 aa23.7■■□□□ 1.38
UBE3B-211ENST00000539843 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
UBE3B-211ENST00000539843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.7■■□□□ 1.38
UBE3B-211ENST00000539843 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
UBE3B-211ENST00000539843 NEURL4Q96JN8 1562 aa23.69■■□□□ 1.38
UBE3B-211ENST00000539843 CEP152O94986 1710 aa23.67■■□□□ 1.38
UBE3B-211ENST00000539843 DEPDC5O75140 1603 aa23.67■■□□□ 1.38
UBE3B-211ENST00000539843 CHIC2Q9UKJ5 165 aa23.67■■□□□ 1.38
UBE3B-211ENST00000539843 ARHGAP31Q2M1Z3 1444 aa23.67■■□□□ 1.38
UBE3B-211ENST00000539843 DISP3Q9P2K9 1392 aa23.66■■□□□ 1.38
UBE3B-211ENST00000539843 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
UBE3B-211ENST00000539843 MED14O60244 1454 aa23.66■■□□□ 1.38
UBE3B-211ENST00000539843 TOM1O60784 492 aa23.63■■□□□ 1.37
UBE3B-211ENST00000539843 STAG3Q9UJ98 1225 aa23.63■■□□□ 1.37
UBE3B-211ENST00000539843 SCAF1Q9H7N4 1312 aaKnown RBP23.61■■□□□ 1.37
UBE3B-211ENST00000539843 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
UBE3B-211ENST00000539843 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
UBE3B-211ENST00000539843 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
UBE3B-211ENST00000539843 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
UBE3B-211ENST00000539843 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
UBE3B-211ENST00000539843 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
UBE3B-211ENST00000539843 UBR1Q8IWV7 1749 aa23.56■■□□□ 1.36
UBE3B-211ENST00000539843 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
UBE3B-211ENST00000539843 PIP4K2BP78356 416 aa23.54■■□□□ 1.36
UBE3B-211ENST00000539843 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
UBE3B-211ENST00000539843 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
UBE3B-211ENST00000539843 SLIT1O75093 1534 aa23.52■■□□□ 1.36
UBE3B-211ENST00000539843 ARHGAP23Q9P227 1491 aa23.5■■□□□ 1.35
UBE3B-211ENST00000539843 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
UBE3B-211ENST00000539843 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
UBE3B-211ENST00000539843 SYNMO15061 1565 aa23.48■■□□□ 1.35
UBE3B-211ENST00000539843 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
UBE3B-211ENST00000539843 PIK3C2BO00750 1634 aa23.47■■□□□ 1.35
UBE3B-211ENST00000539843 LTKP29376 864 aa23.46■■□□□ 1.35
UBE3B-211ENST00000539843 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
UBE3B-211ENST00000539843 IDI1Q13907 227 aa23.45■■□□□ 1.34
UBE3B-211ENST00000539843 KDM5AP29375 1690 aaKnown RBP23.44■■□□□ 1.34
UBE3B-211ENST00000539843 LRRC7Q96NW7 1537 aa23.43■■□□□ 1.34
UBE3B-211ENST00000539843 NOS1P29475 1434 aa23.42■■□□□ 1.34
UBE3B-211ENST00000539843 HSPA1LP34931 641 aa23.41■■□□□ 1.34
UBE3B-211ENST00000539843 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
UBE3B-211ENST00000539843 ADGRB3O60242 1522 aa23.4■■□□□ 1.34
UBE3B-211ENST00000539843 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
UBE3B-211ENST00000539843 BCANQ96GW7 911 aa23.4■■□□□ 1.34
UBE3B-211ENST00000539843 TET3O43151 1660 aa23.37■■□□□ 1.33
UBE3B-211ENST00000539843 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
UBE3B-211ENST00000539843 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
UBE3B-211ENST00000539843 ITGAEP38570 1179 aa23.35■■□□□ 1.33
UBE3B-211ENST00000539843 SOCS7O14512 581 aa23.34■■□□□ 1.33
UBE3B-211ENST00000539843 UNC13BO14795 1591 aa23.34■■□□□ 1.33
UBE3B-211ENST00000539843 STRCP1A6NGW2 1772 aa23.33■■□□□ 1.33
UBE3B-211ENST00000539843 KCNA6P17658 529 aa23.32■■□□□ 1.32
UBE3B-211ENST00000539843 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
UBE3B-211ENST00000539843 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
UBE3B-211ENST00000539843 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
UBE3B-211ENST00000539843 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
UBE3B-211ENST00000539843 NUP155O75694 1391 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms