RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MLECQ14165 292 aa22.97■■□□□ 1.27
DDB1-216ENST00000539739 BCORL1Q5H9F3 1711 aa22.95■■□□□ 1.27
DDB1-216ENST00000539739 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.27
DDB1-216ENST00000539739 HRCP23327 699 aa22.95■■□□□ 1.26
DDB1-216ENST00000539739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.262e-7■■□□□ 13.1
DDB1-216ENST00000539739 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
DDB1-216ENST00000539739 KANK1Q14678 1352 aa22.93■■□□□ 1.26
DDB1-216ENST00000539739 TRIM52Q96A61 297 aa22.92■■□□□ 1.26
DDB1-216ENST00000539739 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
DDB1-216ENST00000539739 RNF17Q9BXT8 1623 aaKnown RBP22.91■■□□□ 1.26
DDB1-216ENST00000539739 NUP155O75694 1391 aa22.89■■□□□ 1.25
DDB1-216ENST00000539739 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
DDB1-216ENST00000539739 DEPDC5O75140 1603 aa22.88■■□□□ 1.25
DDB1-216ENST00000539739 UNC13BO14795 1591 aa22.87■■□□□ 1.25
DDB1-216ENST00000539739 PRDM15P57071 1507 aaPredicted RBP22.86■■□□□ 1.25
DDB1-216ENST00000539739 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
DDB1-216ENST00000539739 FAM135AQ9P2D6 1515 aa22.84■■□□□ 1.25
DDB1-216ENST00000539739 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
DDB1-216ENST00000539739 CNTLNQ9NXG0 1405 aa22.81■■□□□ 1.24
DDB1-216ENST00000539739 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
DDB1-216ENST00000539739 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
DDB1-216ENST00000539739 ABCC3O15438 1527 aa22.79■■□□□ 1.24
DDB1-216ENST00000539739 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
DDB1-216ENST00000539739 ADAMTSL3P82987 1691 aa22.77■■□□□ 1.24
DDB1-216ENST00000539739 ZC3H13Q5T200 1668 aaKnown RBP22.77■■□□□ 1.24
DDB1-216ENST00000539739 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
DDB1-216ENST00000539739 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
DDB1-216ENST00000539739 FER1L4A9Z1Z3 1794 aa22.76■■□□□ 1.23
DDB1-216ENST00000539739 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
DDB1-216ENST00000539739 MADDQ8WXG6 1647 aa22.74■■□□□ 1.23
DDB1-216ENST00000539739 PZPP20742 1482 aa22.74■■□□□ 1.23
DDB1-216ENST00000539739 CEP152O94986 1710 aa22.74■■□□□ 1.23
DDB1-216ENST00000539739 ZMYM3Q14202 1370 aa22.73■■□□□ 1.23
DDB1-216ENST00000539739 PKD2Q13563 968 aa22.71■■□□□ 1.23
DDB1-216ENST00000539739 TET3O43151 1660 aa22.71■■□□□ 1.23
DDB1-216ENST00000539739 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
DDB1-216ENST00000539739 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
DDB1-216ENST00000539739 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
DDB1-216ENST00000539739 EFCAB6Q5THR3 1501 aa22.69■■□□□ 1.22
DDB1-216ENST00000539739 MROH2AA6NES4 1674 aa22.69■■□□□ 1.22
DDB1-216ENST00000539739 RIMS1Q86UR5 1692 aaKnown RBP22.69■■□□□ 1.22
DDB1-216ENST00000539739 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
DDB1-216ENST00000539739 NPATQ14207 1427 aa22.66■■□□□ 1.22
DDB1-216ENST00000539739 CEBPAP49715 358 aaPredicted RBP22.65■■□□□ 1.22
DDB1-216ENST00000539739 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
DDB1-216ENST00000539739 PTPRMP28827 1452 aa22.64■■□□□ 1.21
DDB1-216ENST00000539739 FOXD1Q16676 465 aa22.63■■□□□ 1.21
DDB1-216ENST00000539739 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
DDB1-216ENST00000539739 E9PCH4 1651 aa22.62■■□□□ 1.21
DDB1-216ENST00000539739 FBXO31Q5XUX0 539 aaPredicted RBP22.61■■□□□ 1.21
DDB1-216ENST00000539739 C3P01024 1663 aa22.61■■□□□ 1.21
DDB1-216ENST00000539739 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
DDB1-216ENST00000539739 CFAP65Q6ZU64 1925 aaKnown RBP22.57■■□□□ 1.2
DDB1-216ENST00000539739 NOS1P29475 1434 aa22.56■■□□□ 1.2
DDB1-216ENST00000539739 PTPRTO14522 1441 aa22.56■■□□□ 1.2
DDB1-216ENST00000539739 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
DDB1-216ENST00000539739 SPATA31D1Q6ZQQ2 1576 aa22.55■■□□□ 1.2
DDB1-216ENST00000539739 TNRQ92752 1358 aa22.55■■□□□ 1.2
DDB1-216ENST00000539739 CCER1Q8TC90 406 aaPredicted RBP22.53■■□□□ 1.2
DDB1-216ENST00000539739 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
DDB1-216ENST00000539739 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
DDB1-216ENST00000539739 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
DDB1-216ENST00000539739 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
DDB1-216ENST00000539739 TRPM2O94759 1503 aa22.5■■□□□ 1.19
DDB1-216ENST00000539739 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
DDB1-216ENST00000539739 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
DDB1-216ENST00000539739 SYNMO15061 1565 aa22.48■■□□□ 1.19
DDB1-216ENST00000539739 IDI1Q13907 227 aa22.47■■□□□ 1.19
DDB1-216ENST00000539739 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
DDB1-216ENST00000539739 NLRP1Q9C000 1473 aa22.46■■□□□ 1.19
DDB1-216ENST00000539739 STAG3Q9UJ98 1225 aa22.44■■□□□ 1.18
DDB1-216ENST00000539739 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
DDB1-216ENST00000539739 UHRF1BP1Q6BDS2 1440 aa22.42■■□□□ 1.18
DDB1-216ENST00000539739 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
DDB1-216ENST00000539739 PIK3C2BO00750 1634 aa22.41■■□□□ 1.18
DDB1-216ENST00000539739 CLTCL1P53675 1640 aa22.41■■□□□ 1.18
DDB1-216ENST00000539739 SIN3AQ96ST3 1273 aa22.39■■□□□ 1.18
DDB1-216ENST00000539739 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.17
DDB1-216ENST00000539739 A2ML1A8K2U0 1454 aa22.39■■□□□ 1.17
DDB1-216ENST00000539739 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
DDB1-216ENST00000539739 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
DDB1-216ENST00000539739 THEMISQ8N1K5 641 aaPredicted RBP22.35■■□□□ 1.17
DDB1-216ENST00000539739 CEP170BQ9Y4F5 1589 aaPredicted RBP22.35■■□□□ 1.17
DDB1-216ENST00000539739 KIF1BO60333 1816 aa22.34■■□□□ 1.17
DDB1-216ENST00000539739 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
DDB1-216ENST00000539739 ADGRB3O60242 1522 aa22.34■■□□□ 1.17
DDB1-216ENST00000539739 RGL3Q3MIN7 710 aa22.33■■□□□ 1.17
DDB1-216ENST00000539739 ZNF142P52746 1687 aaPredicted RBP22.32■■□□□ 1.16
DDB1-216ENST00000539739 KDM5AP29375 1690 aaKnown RBP22.31■■□□□ 1.16
DDB1-216ENST00000539739 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
DDB1-216ENST00000539739 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
DDB1-216ENST00000539739 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
DDB1-216ENST00000539739 UBR1Q8IWV7 1749 aa22.29■■□□□ 1.16
DDB1-216ENST00000539739 HDGFP51858 240 aaKnown RBP22.28■■□□□ 1.16
DDB1-216ENST00000539739 RPGRIP1LQ68CZ1 1315 aa22.28■■□□□ 1.16
DDB1-216ENST00000539739 TONSLQ96HA7 1378 aa22.27■■□□□ 1.16
DDB1-216ENST00000539739 LMTK3Q96Q04 1460 aa22.26■■□□□ 1.15
DDB1-216ENST00000539739 TMEM2Q9UHN6 1383 aa22.26■■□□□ 1.15
DDB1-216ENST00000539739 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
DDB1-216ENST00000539739 EID1Q9Y6B2 187 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms