RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CLTCQ00610 1675 aaKnown RBP19.27■□□□□ 0.68
TSPAN9-207ENST00000539631 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
TSPAN9-207ENST00000539631 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
TSPAN9-207ENST00000539631 GCC2Q8IWJ2 1684 aa19.24■□□□□ 0.67
TSPAN9-207ENST00000539631 PTPRMP28827 1452 aa19.24■□□□□ 0.67
TSPAN9-207ENST00000539631 DEPDC5O75140 1603 aa19.24■□□□□ 0.67
TSPAN9-207ENST00000539631 MROH2AA6NES4 1674 aa19.23■□□□□ 0.67
TSPAN9-207ENST00000539631 C3P01024 1663 aa19.22■□□□□ 0.67
TSPAN9-207ENST00000539631 ESF1Q9H501 851 aaKnown RBP19.22■□□□□ 0.67
TSPAN9-207ENST00000539631 CEP152O94986 1710 aa19.22■□□□□ 0.67
TSPAN9-207ENST00000539631 FBXO41Q8TF61 875 aa19.21■□□□□ 0.67
TSPAN9-207ENST00000539631 NAIPQ13075 1403 aa19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 CNTLNQ9NXG0 1405 aa19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 PPP6R1Q9UPN7 881 aa19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
TSPAN9-207ENST00000539631 ZC3H13Q5T200 1668 aaKnown RBP19.19■□□□□ 0.66
TSPAN9-207ENST00000539631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSPAN9-207ENST00000539631 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
TSPAN9-207ENST00000539631 ABCC3O15438 1527 aa19.17■□□□□ 0.66
TSPAN9-207ENST00000539631 CEBPAP49715 358 aaPredicted RBP19.17■□□□□ 0.66
TSPAN9-207ENST00000539631 UNC13BO14795 1591 aa19.17■□□□□ 0.66
TSPAN9-207ENST00000539631 HFM1A2PYH4 1435 aa19.17■□□□□ 0.66
TSPAN9-207ENST00000539631 WASHC2CQ9Y4E1 1318 aa19.16■□□□□ 0.66
TSPAN9-207ENST00000539631 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
TSPAN9-207ENST00000539631 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
TSPAN9-207ENST00000539631 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.66
TSPAN9-207ENST00000539631 KANK1Q14678 1352 aa19.13■□□□□ 0.65
TSPAN9-207ENST00000539631 IQGAP3Q86VI3 1631 aa19.1■□□□□ 0.65
TSPAN9-207ENST00000539631 LMTK2Q8IWU2 1503 aa19.1■□□□□ 0.65
TSPAN9-207ENST00000539631 CFAP65Q6ZU64 1925 aaKnown RBP19.1■□□□□ 0.65
TSPAN9-207ENST00000539631 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
TSPAN9-207ENST00000539631 PZPP20742 1482 aa19.07■□□□□ 0.64
TSPAN9-207ENST00000539631 TET3O43151 1660 aa19.07■□□□□ 0.64
TSPAN9-207ENST00000539631 SETD5Q9C0A6 1442 aa19.06■□□□□ 0.64
TSPAN9-207ENST00000539631 NUP155O75694 1391 aa19.06■□□□□ 0.64
TSPAN9-207ENST00000539631 PREX1Q8TCU6 1659 aa19.05■□□□□ 0.64
TSPAN9-207ENST00000539631 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
TSPAN9-207ENST00000539631 SETD1BQ9UPS6 1966 aaKnown RBP19.04■□□□□ 0.64
TSPAN9-207ENST00000539631 NPATQ14207 1427 aa19.04■□□□□ 0.64
TSPAN9-207ENST00000539631 FBXO31Q5XUX0 539 aaPredicted RBP19.04■□□□□ 0.64
TSPAN9-207ENST00000539631 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
TSPAN9-207ENST00000539631 E9PCH4 1651 aa19.02■□□□□ 0.64
TSPAN9-207ENST00000539631 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
TSPAN9-207ENST00000539631 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
TSPAN9-207ENST00000539631 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
TSPAN9-207ENST00000539631 SPATA31D1Q6ZQQ2 1576 aa19.01■□□□□ 0.63
TSPAN9-207ENST00000539631 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
TSPAN9-207ENST00000539631 ERVK-7P63135 1459 aa19■□□□□ 0.63
TSPAN9-207ENST00000539631 TNRQ92752 1358 aa18.98■□□□□ 0.63
TSPAN9-207ENST00000539631 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
TSPAN9-207ENST00000539631 RPRD2Q5VT52 1461 aaKnown RBP18.96■□□□□ 0.63
TSPAN9-207ENST00000539631 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
TSPAN9-207ENST00000539631 SYNMO15061 1565 aa18.94■□□□□ 0.62
TSPAN9-207ENST00000539631 NOS1P29475 1434 aa18.93■□□□□ 0.62
TSPAN9-207ENST00000539631 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
TSPAN9-207ENST00000539631 SPHKAPQ2M3C7 1700 aa18.92■□□□□ 0.62
TSPAN9-207ENST00000539631 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
TSPAN9-207ENST00000539631 SOCS7O14512 581 aa18.9■□□□□ 0.62
TSPAN9-207ENST00000539631 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
TSPAN9-207ENST00000539631 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
TSPAN9-207ENST00000539631 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
TSPAN9-207ENST00000539631 HRCP23327 699 aa18.89■□□□□ 0.61
TSPAN9-207ENST00000539631 HSPA2P54652 639 aa18.89■□□□□ 0.61
TSPAN9-207ENST00000539631 PKD2Q13563 968 aa18.89■□□□□ 0.61
TSPAN9-207ENST00000539631 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
TSPAN9-207ENST00000539631 PIK3C2BO00750 1634 aa18.89■□□□□ 0.61
TSPAN9-207ENST00000539631 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
TSPAN9-207ENST00000539631 UGGT1Q9NYU2 1555 aa18.86■□□□□ 0.61
TSPAN9-207ENST00000539631 PTPRTO14522 1441 aa18.84■□□□□ 0.61
TSPAN9-207ENST00000539631 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
TSPAN9-207ENST00000539631 IDI1Q13907 227 aa18.84■□□□□ 0.61
TSPAN9-207ENST00000539631 FOXD1Q16676 465 aa18.84■□□□□ 0.61
TSPAN9-207ENST00000539631 SLC52A1Q9NWF4 448 aa18.82■□□□□ 0.6
TSPAN9-207ENST00000539631 TRPM2O94759 1503 aa18.82■□□□□ 0.6
TSPAN9-207ENST00000539631 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
TSPAN9-207ENST00000539631 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
TSPAN9-207ENST00000539631 CLTCL1P53675 1640 aa18.82■□□□□ 0.6
TSPAN9-207ENST00000539631 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
TSPAN9-207ENST00000539631 ADGRB3O60242 1522 aa18.8■□□□□ 0.6
TSPAN9-207ENST00000539631 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
TSPAN9-207ENST00000539631 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
TSPAN9-207ENST00000539631 PCGF6Q9BYE7 350 aa18.78■□□□□ 0.6
TSPAN9-207ENST00000539631 KIF1BO60333 1816 aa18.78■□□□□ 0.6
TSPAN9-207ENST00000539631 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.6
TSPAN9-207ENST00000539631 STAG3Q9UJ98 1225 aa18.77■□□□□ 0.6
TSPAN9-207ENST00000539631 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
TSPAN9-207ENST00000539631 DISP3Q9P2K9 1392 aa18.74■□□□□ 0.59
TSPAN9-207ENST00000539631 ILDR2Q71H61 639 aa18.74■□□□□ 0.59
TSPAN9-207ENST00000539631 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
TSPAN9-207ENST00000539631 SLIT1O75093 1534 aa18.73■□□□□ 0.59
TSPAN9-207ENST00000539631 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
TSPAN9-207ENST00000539631 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
TSPAN9-207ENST00000539631 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
TSPAN9-207ENST00000539631 CCDC144AA2RUR9 1427 aa18.7■□□□□ 0.58
TSPAN9-207ENST00000539631 ANKLE2Q86XL3 938 aa18.69■□□□□ 0.58
TSPAN9-207ENST00000539631 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
TSPAN9-207ENST00000539631 LTKP29376 864 aa18.67■□□□□ 0.58
TSPAN9-207ENST00000539631 DHX57Q6P158 1386 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms