RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
PDZRN4-203ENST00000539469 CCDC141Q6ZP82 1450 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 SHANK2Q9UPX8 1470 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 NAIPQ13075 1403 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 AKNAQ7Z591 1439 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 HNRNPMP52272 730 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 MAST1Q9Y2H9 1570 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 HFM1A2PYH4 1435 aa8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 DIEXFQ68CQ4 756 aaKnown RBP8.94□□□□□ -0.98
PDZRN4-203ENST00000539469 RAB3GAP2Q9H2M9 1393 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 ADGRL2O95490 1459 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 RGL2O15211 777 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 SETD5Q9C0A6 1442 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 TRAPPC8Q9Y2L5 1435 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 KIAA1107Q9UPP5 1409 aa8.93□□□□□ -0.98
PDZRN4-203ENST00000539469 C9orf84Q5VXU9 1444 aa8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 ADGRL1O94910 1474 aa8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 PLEKHH2Q8IVE3 1493 aa8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 INO80Q9ULG1 1556 aaPredicted RBP8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 RICTORQ6R327 1708 aa8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 PLXNC1O60486 1568 aa8.92□□□□□ -0.98
PDZRN4-203ENST00000539469 HOXD11P31277 338 aaPredicted RBP8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 ZFYVE16Q7Z3T8 1539 aa8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 EFCAB2Q5VUJ9 269 aa8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 RRP7BPQ9NSQ0 103 aa8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 ROCK1Q13464 1354 aa8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 FRMPD1Q5SYB0 1578 aa8.91□□□□□ -0.98
PDZRN4-203ENST00000539469 FAM69CQ0P6D2 419 aa8.9□□□□□ -0.98
PDZRN4-203ENST00000539469 NCOA1Q15788 1441 aa8.9□□□□□ -0.98
PDZRN4-203ENST00000539469 KIDINS220Q9ULH0 1771 aa8.9□□□□□ -0.99
PDZRN4-203ENST00000539469 KDM5CP41229 1560 aa8.89□□□□□ -0.99
PDZRN4-203ENST00000539469 NEO1Q92859 1461 aa8.89□□□□□ -0.99
PDZRN4-203ENST00000539469 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
PDZRN4-203ENST00000539469 ATP7AQ04656 1500 aa8.88□□□□□ -0.99
PDZRN4-203ENST00000539469 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
PDZRN4-203ENST00000539469 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
PDZRN4-203ENST00000539469 CHGAP10645 457 aaKnown RBP8.87□□□□□ -0.99
PDZRN4-203ENST00000539469 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
PDZRN4-203ENST00000539469 AFAP1Q8N556 730 aa8.87□□□□□ -0.99
PDZRN4-203ENST00000539469 HECW2Q9P2P5 1572 aa8.87□□□□□ -0.99
PDZRN4-203ENST00000539469 BRPF1P55201 1214 aaPredicted RBP8.86□□□□□ -0.99
PDZRN4-203ENST00000539469 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
PDZRN4-203ENST00000539469 ANKRD30AQ9BXX3 1397 aa8.86□□□□□ -0.99
PDZRN4-203ENST00000539469 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
PDZRN4-203ENST00000539469 DENND4BO75064 1496 aaPredicted RBP8.85□□□□□ -0.99
PDZRN4-203ENST00000539469 KIF15Q9NS87 1388 aa8.85□□□□□ -0.99
PDZRN4-203ENST00000539469 TSPY4P0CV99 314 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 TSPY10P0CW01 314 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 TEX14Q8IWB6 1497 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 UNC13BO14795 1591 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 DUOX2Q9NRD8 1548 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 RTEL1-TNFRSF6BF6WH68 1400 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 ANKRD50Q9ULJ7 1429 aa8.84□□□□□ -0.99
PDZRN4-203ENST00000539469 DIP2CQ9Y2E4 1556 aa8.83□□□□□ -1
PDZRN4-203ENST00000539469 COL17A1Q9UMD9 1497 aaPredicted RBP8.83□□□□□ -1
PDZRN4-203ENST00000539469 ZMYM4Q5VZL5 1548 aa8.83□□□□□ -1
PDZRN4-203ENST00000539469 SIGLEC1Q9BZZ2 1709 aa8.83□□□□□ -1
PDZRN4-203ENST00000539469 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
PDZRN4-203ENST00000539469 RAPGEF3O95398 923 aa8.82□□□□□ -1
PDZRN4-203ENST00000539469 DEPDC5O75140 1603 aa8.82□□□□□ -1
PDZRN4-203ENST00000539469 PZPP20742 1482 aa8.82□□□□□ -1
PDZRN4-203ENST00000539469 MLH3Q9UHC1 1453 aa8.82□□□□□ -1
PDZRN4-203ENST00000539469 EIF2AK4Q9P2K8 1649 aaKnown RBP8.81□□□□□ -1
PDZRN4-203ENST00000539469 MROH1Q8NDA8 1641 aa8.81□□□□□ -1
PDZRN4-203ENST00000539469 KDM5DQ9BY66 1539 aa8.81□□□□□ -1
PDZRN4-203ENST00000539469 ERBINQ96RT1 1412 aa8.81□□□□□ -1
PDZRN4-203ENST00000539469 MAGI2Q86UL8 1455 aa8.8□□□□□ -1
PDZRN4-203ENST00000539469 IQGAP3Q86VI3 1631 aa8.8□□□□□ -1
PDZRN4-203ENST00000539469 BCORL1Q5H9F3 1711 aa8.79□□□□□ -1
PDZRN4-203ENST00000539469 YEATS2Q9ULM3 1422 aa8.79□□□□□ -1
PDZRN4-203ENST00000539469 RNF17Q9BXT8 1623 aaKnown RBP8.78□□□□□ -1
PDZRN4-203ENST00000539469 CEP152O94986 1710 aa8.78□□□□□ -1
PDZRN4-203ENST00000539469 FAM135AQ9P2D6 1515 aa8.77□□□□□ -1
PDZRN4-203ENST00000539469 A2MP01023 1474 aa8.77□□□□□ -1
PDZRN4-203ENST00000539469 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
PDZRN4-203ENST00000539469 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
PDZRN4-203ENST00000539469 ARHGEF40Q8TER5 1519 aa8.77□□□□□ -1.01
PDZRN4-203ENST00000539469 PRDM15P57071 1507 aaPredicted RBP8.77□□□□□ -1.01
PDZRN4-203ENST00000539469 VWDEQ8N2E2 1590 aa8.76□□□□□ -1.01
PDZRN4-203ENST00000539469 DHX29Q7Z478 1369 aaKnown RBP8.76□□□□□ -1.01
PDZRN4-203ENST00000539469 MYT1LQ9UL68 1186 aa8.76□□□□□ -1.01
PDZRN4-203ENST00000539469 E9PCH4 1651 aa8.76□□□□□ -1.01
PDZRN4-203ENST00000539469 NUP155O75694 1391 aa8.75□□□□□ -1.01
PDZRN4-203ENST00000539469 MPHOSPH9Q99550 1183 aa8.75□□□□□ -1.01
PDZRN4-203ENST00000539469 REREQ9P2R6 1566 aa8.74□□□□□ -1.01
PDZRN4-203ENST00000539469 TET3O43151 1660 aa8.74□□□□□ -1.01
PDZRN4-203ENST00000539469 DCAF8L1A6NGE4 600 aa8.73□□□□□ -1.01
PDZRN4-203ENST00000539469 MIER1Q8N108 512 aa8.73□□□□□ -1.01
PDZRN4-203ENST00000539469 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
PDZRN4-203ENST00000539469 CLSPNQ9HAW4 1339 aa8.73□□□□□ -1.01
PDZRN4-203ENST00000539469 C1orf115Q9H7X2 142 aa8.72□□□□□ -1.01
PDZRN4-203ENST00000539469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDZRN4-203ENST00000539469 ATP10AO60312 1499 aa8.71□□□□□ -1.01
PDZRN4-203ENST00000539469 CAMSAP1Q5T5Y3 1602 aa8.71□□□□□ -1.01
PDZRN4-203ENST00000539469 SPHKAPQ2M3C7 1700 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms