RNA–Protein interactions for RNA: ENST00000539277.5

TMTC1-203, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMTC1, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-203ENST00000539277 RAPGEF3O95398 923 aa26.43■■□□□ 1.82
TMTC1-203ENST00000539277 ZNF326Q5BKZ1 582 aaKnown RBP26.43■■□□□ 1.82
TMTC1-203ENST00000539277 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
TMTC1-203ENST00000539277 ZFYVE16Q7Z3T8 1539 aa26.42■■□□□ 1.82
TMTC1-203ENST00000539277 FAM69CQ0P6D2 419 aa26.41■■□□□ 1.82
TMTC1-203ENST00000539277 FAM135AQ9P2D6 1515 aa26.41■■□□□ 1.82
TMTC1-203ENST00000539277 DUOX2Q9NRD8 1548 aa26.41■■□□□ 1.82
TMTC1-203ENST00000539277 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
TMTC1-203ENST00000539277 KIF3BO15066 747 aa26.37■■□□□ 1.81
TMTC1-203ENST00000539277 ATP7AQ04656 1500 aa26.37■■□□□ 1.81
TMTC1-203ENST00000539277 KDM5DQ9BY66 1539 aa26.35■■□□□ 1.81
TMTC1-203ENST00000539277 ERBINQ96RT1 1412 aa26.34■■□□□ 1.81
TMTC1-203ENST00000539277 IRX6P78412 446 aaPredicted RBP26.34■■□□□ 1.81
TMTC1-203ENST00000539277 TEX14Q8IWB6 1497 aa26.34■■□□□ 1.81
TMTC1-203ENST00000539277 RTEL1-TNFRSF6BF6WH68 1400 aa26.33■■□□□ 1.81
TMTC1-203ENST00000539277 KDM2AQ9Y2K7 1162 aa26.32■■□□□ 1.8
TMTC1-203ENST00000539277 SALL2Q9Y467 1007 aaPredicted RBP26.31■■□□□ 1.8
TMTC1-203ENST00000539277 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
TMTC1-203ENST00000539277 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
TMTC1-203ENST00000539277 NBR1Q14596 966 aa26.29■■□□□ 1.8
TMTC1-203ENST00000539277 UNC13BO14795 1591 aa26.29■■□□□ 1.8
TMTC1-203ENST00000539277 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
TMTC1-203ENST00000539277 POGZQ7Z3K3 1410 aa26.27■■□□□ 1.8
TMTC1-203ENST00000539277 KIDINS220Q9ULH0 1771 aa26.24■■□□□ 1.79
TMTC1-203ENST00000539277 HSPA5P11021 654 aaKnown RBP26.24■■□□□ 1.79
TMTC1-203ENST00000539277 PLA2R1Q13018 1463 aa26.23■■□□□ 1.79
TMTC1-203ENST00000539277 DHX29Q7Z478 1369 aaKnown RBP26.23■■□□□ 1.79
TMTC1-203ENST00000539277 DCAF11Q8TEB1 546 aa26.23■■□□□ 1.79
TMTC1-203ENST00000539277 TSPOAP1O95153 1857 aa26.22■■□□□ 1.79
TMTC1-203ENST00000539277 GGT6Q6P531 493 aa26.22■■□□□ 1.79
TMTC1-203ENST00000539277 CCDC144AA2RUR9 1427 aa26.21■■□□□ 1.79
TMTC1-203ENST00000539277 CCDC136Q96JN2 1154 aa26.21■■□□□ 1.79
TMTC1-203ENST00000539277 IQGAP3Q86VI3 1631 aa26.2■■□□□ 1.79
TMTC1-203ENST00000539277 MAGI2Q86UL8 1455 aa26.19■■□□□ 1.78
TMTC1-203ENST00000539277 MAP3K4Q9Y6R4 1608 aa26.18■■□□□ 1.78
TMTC1-203ENST00000539277 CFAP74Q9C0B2 1584 aa26.17■■□□□ 1.78
TMTC1-203ENST00000539277 NEO1Q92859 1461 aa26.17■■□□□ 1.78
TMTC1-203ENST00000539277 ANP32CO43423 234 aa26.17■■□□□ 1.78
TMTC1-203ENST00000539277 DIP2BQ9P265 1576 aa26.17■■□□□ 1.78
TMTC1-203ENST00000539277 CCER2I3L3R5 266 aa26.16■■□□□ 1.78
TMTC1-203ENST00000539277 EIF4G2P78344 907 aaKnown RBP eCLIP26.15■■□□□ 1.78
TMTC1-203ENST00000539277 A2MP01023 1474 aa26.15■■□□□ 1.78
TMTC1-203ENST00000539277 KDM5CP41229 1560 aa26.14■■□□□ 1.78
TMTC1-203ENST00000539277 YEATS2Q9ULM3 1422 aa26.12■■□□□ 1.77
TMTC1-203ENST00000539277 KANK1Q14678 1352 aa26.12■■□□□ 1.77
TMTC1-203ENST00000539277 NOP58Q9Y2X3 529 aaKnown RBP26.11■■□□□ 1.77
TMTC1-203ENST00000539277 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
TMTC1-203ENST00000539277 ERICH6BQ5W0A0 696 aa26.11■■□□□ 1.77
TMTC1-203ENST00000539277 MLH3Q9UHC1 1453 aa26.11■■□□□ 1.77
TMTC1-203ENST00000539277 GLI2P10070 1586 aa26.09■■□□□ 1.77
TMTC1-203ENST00000539277 ABCA6Q8N139 1617 aa26.08■■□□□ 1.77
TMTC1-203ENST00000539277 FRMPD1Q5SYB0 1578 aa26.08■■□□□ 1.77
TMTC1-203ENST00000539277 PAK3O75914 559 aaPredicted RBP26.07■■□□□ 1.76
TMTC1-203ENST00000539277 C11orf95C9JLR9 678 aaPredicted RBP26.07■■□□□ 1.76
TMTC1-203ENST00000539277 E9PCH4 1651 aa26.07■■□□□ 1.76
TMTC1-203ENST00000539277 MROH1Q8NDA8 1641 aa26.06■■□□□ 1.76
TMTC1-203ENST00000539277 DEPDC5O75140 1603 aa26.05■■□□□ 1.76
TMTC1-203ENST00000539277 RTN4Q9NQC3 1192 aaKnown RBP26.05■■□□□ 1.76
TMTC1-203ENST00000539277 ATP10AO60312 1499 aa26.04■■□□□ 1.76
TMTC1-203ENST00000539277 WASHC2AQ641Q2 1341 aa26.04■■□□□ 1.76
TMTC1-203ENST00000539277 IL27Q8NEV9 243 aa26.03■■□□□ 1.76
TMTC1-203ENST00000539277 HNRNPUQ00839 825 aaKnown RBP eCLIP26.03■■□□□ 1.76
TMTC1-203ENST00000539277 RICTORQ6R327 1708 aa26.02■■□□□ 1.76
TMTC1-203ENST00000539277 CARD11Q9BXL7 1154 aa26.01■■□□□ 1.76
TMTC1-203ENST00000539277 WASHC2CQ9Y4E1 1318 aa26.01■■□□□ 1.75
TMTC1-203ENST00000539277 POLR3GLQ9BT43 218 aa26.01■■□□□ 1.75
TMTC1-203ENST00000539277 PRDM15P57071 1507 aaPredicted RBP26■■□□□ 1.75
TMTC1-203ENST00000539277 ZBTB4Q9P1Z0 1013 aaPredicted RBP26■■□□□ 1.75
TMTC1-203ENST00000539277 CFAP65Q6ZU64 1925 aaKnown RBP25.99■■□□□ 1.75
TMTC1-203ENST00000539277 UGGT1Q9NYU2 1555 aa25.99■■□□□ 1.75
TMTC1-203ENST00000539277 PPRC1Q5VV67 1664 aaKnown RBP25.99■■□□□ 1.75
TMTC1-203ENST00000539277 NBPF1Q3BBV0 1214 aa25.99■■□□□ 1.75
TMTC1-203ENST00000539277 EIF2AK4Q9P2K8 1649 aaKnown RBP25.98■■□□□ 1.75
TMTC1-203ENST00000539277 DIP2CQ9Y2E4 1556 aa25.98■■□□□ 1.75
TMTC1-203ENST00000539277 PPP4R2Q9NY27 417 aa25.98■■□□□ 1.75
TMTC1-203ENST00000539277 VWDEQ8N2E2 1590 aa25.97■■□□□ 1.75
TMTC1-203ENST00000539277 USP47Q96K76 1375 aa25.97■■□□□ 1.75
TMTC1-203ENST00000539277 TET3O43151 1660 aa25.96■■□□□ 1.75
TMTC1-203ENST00000539277 CEP152O94986 1710 aa25.95■■□□□ 1.75
TMTC1-203ENST00000539277 CHGAP10645 457 aaKnown RBP25.95■■□□□ 1.74
TMTC1-203ENST00000539277 COL17A1Q9UMD9 1497 aaPredicted RBP25.94■■□□□ 1.74
TMTC1-203ENST00000539277 RTL5Q5HYW3 569 aaPredicted RBP25.94■■□□□ 1.74
TMTC1-203ENST00000539277 B4GALNT3Q6L9W6 998 aa25.94■■□□□ 1.74
TMTC1-203ENST00000539277 ROCK2O75116 1388 aaKnown RBP25.94■■□□□ 1.74
TMTC1-203ENST00000539277 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
TMTC1-203ENST00000539277 SPATA31E1Q6ZUB1 1445 aa25.93■■□□□ 1.74
TMTC1-203ENST00000539277 KIF13AQ9H1H9 1805 aa25.93■■□□□ 1.74
TMTC1-203ENST00000539277 MLECQ14165 292 aa25.92■■□□□ 1.74
TMTC1-203ENST00000539277 PTPRTO14522 1441 aa25.91■■□□□ 1.74
TMTC1-203ENST00000539277 PRAG1Q86YV5 1406 aa25.91■■□□□ 1.74
TMTC1-203ENST00000539277 CLTCL1P53675 1640 aa25.91■■□□□ 1.74
TMTC1-203ENST00000539277 TRPM2O94759 1503 aa25.91■■□□□ 1.74
TMTC1-203ENST00000539277 SPHKAPQ2M3C7 1700 aa25.9■■□□□ 1.74
TMTC1-203ENST00000539277 EFCAB6Q5THR3 1501 aa25.89■■□□□ 1.74
TMTC1-203ENST00000539277 RALGAPBQ86X10 1494 aa25.89■■□□□ 1.74
TMTC1-203ENST00000539277 NPATQ14207 1427 aa25.89■■□□□ 1.74
TMTC1-203ENST00000539277 ST20-MTHFSA0A0A6YYL1 179 aa25.89■■□□□ 1.73
TMTC1-203ENST00000539277 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
TMTC1-203ENST00000539277 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
TMTC1-203ENST00000539277 KIF7Q2M1P5 1343 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms