RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 PIP4K2BP78356 416 aa23.76■■□□□ 1.39
CCDC144NL-202ENST00000539177 CPS1P31327 1500 aa23.74■■□□□ 1.39
CCDC144NL-202ENST00000539177 HSPA1LP34931 641 aa23.73■■□□□ 1.39
CCDC144NL-202ENST00000539177 TNRQ92752 1358 aa23.73■■□□□ 1.39
CCDC144NL-202ENST00000539177 KDM5DQ9BY66 1539 aa23.73■■□□□ 1.39
CCDC144NL-202ENST00000539177 FBXO31Q5XUX0 539 aaPredicted RBP23.72■■□□□ 1.39
CCDC144NL-202ENST00000539177 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
CCDC144NL-202ENST00000539177 RTEL1-TNFRSF6BF6WH68 1400 aa23.71■■□□□ 1.39
CCDC144NL-202ENST00000539177 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
CCDC144NL-202ENST00000539177 PZPP20742 1482 aa23.7■■□□□ 1.38
CCDC144NL-202ENST00000539177 KIF3BO15066 747 aa23.69■■□□□ 1.38
CCDC144NL-202ENST00000539177 VWDEQ8N2E2 1590 aa23.68■■□□□ 1.38
CCDC144NL-202ENST00000539177 CCDC141Q6ZP82 1450 aa23.67■■□□□ 1.38
CCDC144NL-202ENST00000539177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.66■■□□□ 1.389e-7■■■□□ 17.3
CCDC144NL-202ENST00000539177 TOM1O60784 492 aa23.66■■□□□ 1.38
CCDC144NL-202ENST00000539177 CAMSAP2Q08AD1 1489 aa23.66■■□□□ 1.38
CCDC144NL-202ENST00000539177 FAM135AQ9P2D6 1515 aa23.65■■□□□ 1.38
CCDC144NL-202ENST00000539177 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
CCDC144NL-202ENST00000539177 UGGT1Q9NYU2 1555 aa23.65■■□□□ 1.38
CCDC144NL-202ENST00000539177 IQGAP1P46940 1657 aa23.64■■□□□ 1.38
CCDC144NL-202ENST00000539177 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
CCDC144NL-202ENST00000539177 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
CCDC144NL-202ENST00000539177 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
CCDC144NL-202ENST00000539177 WASHC2CQ9Y4E1 1318 aa23.62■■□□□ 1.37
CCDC144NL-202ENST00000539177 ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
CCDC144NL-202ENST00000539177 NPHP4O75161 1426 aaPredicted RBP23.6■■□□□ 1.37
CCDC144NL-202ENST00000539177 NLRP1Q9C000 1473 aa23.6■■□□□ 1.37
CCDC144NL-202ENST00000539177 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
CCDC144NL-202ENST00000539177 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
CCDC144NL-202ENST00000539177 MIA2Q96PC5 1412 aa23.59■■□□□ 1.37
CCDC144NL-202ENST00000539177 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
CCDC144NL-202ENST00000539177 MED14O60244 1454 aa23.56■■□□□ 1.36
CCDC144NL-202ENST00000539177 THEMISQ8N1K5 641 aaPredicted RBP23.56■■□□□ 1.36
CCDC144NL-202ENST00000539177 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
CCDC144NL-202ENST00000539177 ARHGEF5Q12774 1597 aa23.56■■□□□ 1.36
CCDC144NL-202ENST00000539177 RNF17Q9BXT8 1623 aaKnown RBP23.55■■□□□ 1.36
CCDC144NL-202ENST00000539177 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
CCDC144NL-202ENST00000539177 CEP152O94986 1710 aa23.55■■□□□ 1.36
CCDC144NL-202ENST00000539177 SYNMO15061 1565 aa23.53■■□□□ 1.36
CCDC144NL-202ENST00000539177 ABCC3O15438 1527 aa23.51■■□□□ 1.35
CCDC144NL-202ENST00000539177 LRRC7Q96NW7 1537 aa23.5■■□□□ 1.35
CCDC144NL-202ENST00000539177 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
CCDC144NL-202ENST00000539177 RSPH4AQ5TD94 716 aa23.48■■□□□ 1.35
CCDC144NL-202ENST00000539177 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
CCDC144NL-202ENST00000539177 ERVK-7P63135 1459 aa23.47■■□□□ 1.35
CCDC144NL-202ENST00000539177 MROH1Q8NDA8 1641 aa23.47■■□□□ 1.35
CCDC144NL-202ENST00000539177 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
CCDC144NL-202ENST00000539177 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
CCDC144NL-202ENST00000539177 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
CCDC144NL-202ENST00000539177 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
CCDC144NL-202ENST00000539177 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
CCDC144NL-202ENST00000539177 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
CCDC144NL-202ENST00000539177 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
CCDC144NL-202ENST00000539177 SLIT1O75093 1534 aa23.33■■□□□ 1.32
CCDC144NL-202ENST00000539177 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
CCDC144NL-202ENST00000539177 CROCC2H7BZ55 1655 aa23.32■■□□□ 1.32
CCDC144NL-202ENST00000539177 ARHGAP23Q9P227 1491 aa23.31■■□□□ 1.32
CCDC144NL-202ENST00000539177 PRDM15P57071 1507 aaPredicted RBP23.3■■□□□ 1.32
CCDC144NL-202ENST00000539177 LTKP29376 864 aa23.3■■□□□ 1.32
CCDC144NL-202ENST00000539177 TXNDC2Q86VQ3 553 aa23.29■■□□□ 1.32
CCDC144NL-202ENST00000539177 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
CCDC144NL-202ENST00000539177 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
CCDC144NL-202ENST00000539177 VPS8Q8N3P4 1428 aa23.26■■□□□ 1.31
CCDC144NL-202ENST00000539177 ROBO1Q9Y6N7 1651 aa23.24■■□□□ 1.31
CCDC144NL-202ENST00000539177 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
CCDC144NL-202ENST00000539177 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
CCDC144NL-202ENST00000539177 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
CCDC144NL-202ENST00000539177 KIF15Q9NS87 1388 aa23.22■■□□□ 1.31
CCDC144NL-202ENST00000539177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.318e-6■□□□□ 8.2
CCDC144NL-202ENST00000539177 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
CCDC144NL-202ENST00000539177 ERBINQ96RT1 1412 aa23.2■■□□□ 1.3
CCDC144NL-202ENST00000539177 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
CCDC144NL-202ENST00000539177 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
CCDC144NL-202ENST00000539177 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
CCDC144NL-202ENST00000539177 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
CCDC144NL-202ENST00000539177 TMEM94Q12767 1356 aa23.18■■□□□ 1.3
CCDC144NL-202ENST00000539177 RRP7BPQ9NSQ0 103 aa23.18■■□□□ 1.3
CCDC144NL-202ENST00000539177 SETD1AO15047 1707 aaKnown RBP23.18■■□□□ 1.3
CCDC144NL-202ENST00000539177 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
CCDC144NL-202ENST00000539177 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
CCDC144NL-202ENST00000539177 RBM33Q96EV2 1170 aaKnown RBP23.16■■□□□ 1.3
CCDC144NL-202ENST00000539177 ABCC5O15440 1437 aa23.16■■□□□ 1.3
CCDC144NL-202ENST00000539177 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
CCDC144NL-202ENST00000539177 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
CCDC144NL-202ENST00000539177 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
CCDC144NL-202ENST00000539177 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
CCDC144NL-202ENST00000539177 KANK1Q14678 1352 aa23.13■■□□□ 1.29
CCDC144NL-202ENST00000539177 TET3O43151 1660 aa23.13■■□□□ 1.29
CCDC144NL-202ENST00000539177 NWD1Q149M9 1564 aa23.11■■□□□ 1.29
CCDC144NL-202ENST00000539177 DAPK1P53355 1430 aa23.11■■□□□ 1.29
CCDC144NL-202ENST00000539177 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
CCDC144NL-202ENST00000539177 PROSER2Q86WR7 435 aaPredicted RBP23.1■■□□□ 1.29
CCDC144NL-202ENST00000539177 KCNA6P17658 529 aa23.09■■□□□ 1.29
CCDC144NL-202ENST00000539177 IDI1Q13907 227 aa23.09■■□□□ 1.29
CCDC144NL-202ENST00000539177 LMTK2Q8IWU2 1503 aa23.08■■□□□ 1.29
CCDC144NL-202ENST00000539177 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
CCDC144NL-202ENST00000539177 NKTRP30414 1462 aaKnown RBP23.06■■□□□ 1.28
CCDC144NL-202ENST00000539177 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
CCDC144NL-202ENST00000539177 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
CCDC144NL-202ENST00000539177 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms