RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 TIMELESSQ9UNS1 1208 aa36.77■■■■□ 3.48
KLHL42-202ENST00000539176 DHX29Q7Z478 1369 aaKnown RBP36.75■■■■□ 3.47
KLHL42-202ENST00000539176 PKD2Q13563 968 aa36.73■■■■□ 3.47
KLHL42-202ENST00000539176 FAM135AQ9P2D6 1515 aa36.73■■■■□ 3.47
KLHL42-202ENST00000539176 A2MP01023 1474 aa36.72■■■■□ 3.47
KLHL42-202ENST00000539176 MAGI2Q86UL8 1455 aa36.7■■■■□ 3.47
KLHL42-202ENST00000539176 TRHP20396 242 aaPredicted RBP36.7■■■■□ 3.47
KLHL42-202ENST00000539176 COL17A1Q9UMD9 1497 aaPredicted RBP36.69■■■■□ 3.46
KLHL42-202ENST00000539176 DIP2CQ9Y2E4 1556 aa36.69■■■■□ 3.46
KLHL42-202ENST00000539176 YEATS2Q9ULM3 1422 aa36.69■■■■□ 3.46
KLHL42-202ENST00000539176 IQGAP3Q86VI3 1631 aa36.68■■■■□ 3.46
KLHL42-202ENST00000539176 KIF3BO15066 747 aa36.68■■■■□ 3.46
KLHL42-202ENST00000539176 ANKRD30BQ9BXX2 1392 aa36.68■■■■□ 3.46
KLHL42-202ENST00000539176 EIF2AK4Q9P2K8 1649 aaKnown RBP36.67■■■■□ 3.46
KLHL42-202ENST00000539176 ZMYM4Q5VZL5 1548 aa36.66■■■■□ 3.46
KLHL42-202ENST00000539176 DEPDC5O75140 1603 aa36.65■■■■□ 3.46
KLHL42-202ENST00000539176 MROH1Q8NDA8 1641 aa36.59■■■■□ 3.45
KLHL42-202ENST00000539176 TONSLQ96HA7 1378 aa36.53■■■■□ 3.44
KLHL42-202ENST00000539176 PRDM15P57071 1507 aaPredicted RBP36.52■■■■□ 3.44
KLHL42-202ENST00000539176 RNF17Q9BXT8 1623 aaKnown RBP36.52■■■■□ 3.44
KLHL42-202ENST00000539176 VWDEQ8N2E2 1590 aa36.5■■■■□ 3.43
KLHL42-202ENST00000539176 BCORL1Q5H9F3 1711 aa36.48■■■■□ 3.43
KLHL42-202ENST00000539176 KANK1Q14678 1352 aa36.48■■■■□ 3.43
KLHL42-202ENST00000539176 RPRD2Q5VT52 1461 aaKnown RBP36.47■■■■□ 3.43
KLHL42-202ENST00000539176 GGT6Q6P531 493 aa36.45■■■■□ 3.43
KLHL42-202ENST00000539176 ATP10AO60312 1499 aa36.44■■■■□ 3.42
KLHL42-202ENST00000539176 E9PCH4 1651 aa36.43■■■■□ 3.42
KLHL42-202ENST00000539176 TET3O43151 1660 aa36.42■■■■□ 3.42
KLHL42-202ENST00000539176 CEP152O94986 1710 aa36.42■■■■□ 3.42
KLHL42-202ENST00000539176 PLA2R1Q13018 1463 aa36.39■■■■□ 3.42
KLHL42-202ENST00000539176 ARHGEF40Q8TER5 1519 aa36.39■■■■□ 3.42
KLHL42-202ENST00000539176 PPP1R15AO75807 674 aaPredicted RBP36.37■■■■□ 3.41
KLHL42-202ENST00000539176 SIGLEC1Q9BZZ2 1709 aa36.36■■■■□ 3.41
KLHL42-202ENST00000539176 L3MBTL2Q969R5 705 aa36.33■■■■□ 3.41
KLHL42-202ENST00000539176 REREQ9P2R6 1566 aa36.32■■■■□ 3.4
KLHL42-202ENST00000539176 LMTK2Q8IWU2 1503 aa36.3■■■■□ 3.4
KLHL42-202ENST00000539176 EFCAB6Q5THR3 1501 aa36.29■■■■□ 3.4
KLHL42-202ENST00000539176 ABCC3O15438 1527 aa36.28■■■■□ 3.4
KLHL42-202ENST00000539176 CCDC144AA2RUR9 1427 aa36.27■■■■□ 3.4
KLHL42-202ENST00000539176 WASHC2CQ9Y4E1 1318 aa36.26■■■■□ 3.4
KLHL42-202ENST00000539176 SPHKAPQ2M3C7 1700 aa36.26■■■■□ 3.39
KLHL42-202ENST00000539176 AGLP35573 1532 aa36.24■■■■□ 3.39
KLHL42-202ENST00000539176 CAMSAP1Q5T5Y3 1602 aa36.2■■■■□ 3.39
KLHL42-202ENST00000539176 CFAP65Q6ZU64 1925 aaKnown RBP36.2■■■■□ 3.39
KLHL42-202ENST00000539176 PTPRTO14522 1441 aa36.2■■■■□ 3.38
KLHL42-202ENST00000539176 TRPM2O94759 1503 aa36.19■■■■□ 3.38
KLHL42-202ENST00000539176 NPATQ14207 1427 aa36.16■■■■□ 3.38
KLHL42-202ENST00000539176 MLECQ14165 292 aa36.16■■■■□ 3.38
KLHL42-202ENST00000539176 ZC3H13Q5T200 1668 aaKnown RBP36.15■■■■□ 3.38
KLHL42-202ENST00000539176 CLTCL1P53675 1640 aa36.14■■■■□ 3.38
KLHL42-202ENST00000539176 MIER1Q8N108 512 aa36.12■■■■□ 3.37
KLHL42-202ENST00000539176 UGGT1Q9NYU2 1555 aa36.11■■■■□ 3.37
KLHL42-202ENST00000539176 NBPF8Q3BBV2 869 aa36.09■■■■□ 3.37
KLHL42-202ENST00000539176 RGL3Q3MIN7 710 aa36.09■■■■□ 3.37
KLHL42-202ENST00000539176 ARID4BQ4LE39 1312 aaPredicted RBP36.06■■■■□ 3.36
KLHL42-202ENST00000539176 CLTCQ00610 1675 aaKnown RBP36.04■■■■□ 3.36
KLHL42-202ENST00000539176 KDM2AQ9Y2K7 1162 aa36.03■■■■□ 3.36
KLHL42-202ENST00000539176 CENPBP07199 599 aaPredicted RBP36.02■■■■□ 3.36
KLHL42-202ENST00000539176 ZNF326Q5BKZ1 582 aaKnown RBP36.02■■■■□ 3.36
KLHL42-202ENST00000539176 DCAF11Q8TEB1 546 aa36.02■■■■□ 3.36
KLHL42-202ENST00000539176 ARHGAP31Q2M1Z3 1444 aa36■■■■□ 3.35
KLHL42-202ENST00000539176 SPATA31E1Q6ZUB1 1445 aa36■■■■□ 3.35
KLHL42-202ENST00000539176 PPP6R1Q9UPN7 881 aa35.96■■■■□ 3.35
KLHL42-202ENST00000539176 NOS1P29475 1434 aa35.95■■■■□ 3.35
KLHL42-202ENST00000539176 SYNMO15061 1565 aa35.95■■■■□ 3.34
KLHL42-202ENST00000539176 CNTLNQ9NXG0 1405 aa35.95■■■■□ 3.34
KLHL42-202ENST00000539176 PREX1Q8TCU6 1659 aa35.93■■■■□ 3.34
KLHL42-202ENST00000539176 KIF1BO60333 1816 aa35.92■■■■□ 3.34
KLHL42-202ENST00000539176 MROH2AA6NES4 1674 aa35.9■■■■□ 3.34
KLHL42-202ENST00000539176 FBXO31Q5XUX0 539 aaPredicted RBP35.9■■■■□ 3.34
KLHL42-202ENST00000539176 HIRIP3Q9BW71 556 aaPredicted RBP35.9■■■■□ 3.34
KLHL42-202ENST00000539176 UHRF1BP1Q6BDS2 1440 aa35.9■■■■□ 3.34
KLHL42-202ENST00000539176 PIK3C2BO00750 1634 aa35.84■■■■□ 3.33
KLHL42-202ENST00000539176 CHGAP10645 457 aaKnown RBP35.84■■■■□ 3.33
KLHL42-202ENST00000539176 ESF1Q9H501 851 aaKnown RBP35.84■■■■□ 3.33
KLHL42-202ENST00000539176 ERVK-7P63135 1459 aa35.83■■■■□ 3.33
KLHL42-202ENST00000539176 PRAG1Q86YV5 1406 aa35.82■■■■□ 3.32
KLHL42-202ENST00000539176 ADGRB3O60242 1522 aa35.81■■■■□ 3.32
KLHL42-202ENST00000539176 NEURL4Q96JN8 1562 aa35.79■■■■□ 3.32
KLHL42-202ENST00000539176 ZMYM3Q14202 1370 aa35.78■■■■□ 3.32
KLHL42-202ENST00000539176 RALGAPBQ86X10 1494 aa35.77■■■■□ 3.32
KLHL42-202ENST00000539176 IDI1Q13907 227 aa35.76■■■■□ 3.32
KLHL42-202ENST00000539176 HSPA5P11021 654 aaKnown RBP35.74■■■■□ 3.31
KLHL42-202ENST00000539176 TRPM1Q7Z4N2 1603 aa35.74■■■■□ 3.31
KLHL42-202ENST00000539176 SPATA31D1Q6ZQQ2 1576 aa35.72■■■■□ 3.31
KLHL42-202ENST00000539176 IFT172Q9UG01 1749 aa35.72■■■■□ 3.31
KLHL42-202ENST00000539176 MADDQ8WXG6 1647 aa35.71■■■■□ 3.31
KLHL42-202ENST00000539176 FER1L4A9Z1Z3 1794 aa35.7■■■■□ 3.3
KLHL42-202ENST00000539176 EIF4G2P78344 907 aaKnown RBP eCLIP35.69■■■■□ 3.3
KLHL42-202ENST00000539176 SLC52A1Q9NWF4 448 aa35.69■■■■□ 3.3
KLHL42-202ENST00000539176 MYO5BQ9ULV0 1848 aa35.69■■■■□ 3.3
KLHL42-202ENST00000539176 DDX10Q13206 875 aaKnown RBP35.65■■■■□ 3.3
KLHL42-202ENST00000539176 NBPF1Q3BBV0 1214 aa35.65■■■■□ 3.3
KLHL42-202ENST00000539176 ROCK2O75116 1388 aaKnown RBP35.64■■■■□ 3.3
KLHL42-202ENST00000539176 PPLO60437 1756 aa35.64■■■■□ 3.3
KLHL42-202ENST00000539176 CARD11Q9BXL7 1154 aa35.63■■■■□ 3.29
KLHL42-202ENST00000539176 TMEM131LA2VDJ0 1609 aa35.63■■■■□ 3.29
KLHL42-202ENST00000539176 CEBPAP49715 358 aaPredicted RBP35.62■■■■□ 3.29
KLHL42-202ENST00000539176 ADGRF5Q8IZF2 1346 aa35.62■■■■□ 3.29
KLHL42-202ENST00000539176 MYOM2P54296 1465 aa35.61■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms