RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
USP30-210ENST00000539121 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
USP30-210ENST00000539121 SOCS7O14512 581 aa10.03□□□□□ -0.8
USP30-210ENST00000539121 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
USP30-210ENST00000539121 CEP170BQ9Y4F5 1589 aaPredicted RBP10.03□□□□□ -0.8
USP30-210ENST00000539121 MYO3AQ8NEV4 1616 aa10.03□□□□□ -0.8
USP30-210ENST00000539121 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.8
USP30-210ENST00000539121 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
USP30-210ENST00000539121 ILDR2Q71H61 639 aa10.01□□□□□ -0.81
USP30-210ENST00000539121 A2ML1A8K2U0 1454 aa10.01□□□□□ -0.81
USP30-210ENST00000539121 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
USP30-210ENST00000539121 CCDC141Q6ZP82 1450 aa9.99□□□□□ -0.81
USP30-210ENST00000539121 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
USP30-210ENST00000539121 KIF3BO15066 747 aa9.99□□□□□ -0.81
USP30-210ENST00000539121 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
USP30-210ENST00000539121 PZPP20742 1482 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 SPATA31D1Q6ZQQ2 1576 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 TSPY4P0CV99 314 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 TSPY10P0CW01 314 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 TNRQ92752 1358 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
USP30-210ENST00000539121 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
USP30-210ENST00000539121 DCAF8L1A6NGE4 600 aa9.97□□□□□ -0.81
USP30-210ENST00000539121 THEMISQ8N1K5 641 aaPredicted RBP9.97□□□□□ -0.81
USP30-210ENST00000539121 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
USP30-210ENST00000539121 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
USP30-210ENST00000539121 ANKLE2Q86XL3 938 aa9.96□□□□□ -0.82
USP30-210ENST00000539121 MIA2Q96PC5 1412 aa9.96□□□□□ -0.82
USP30-210ENST00000539121 NLRP1Q9C000 1473 aa9.96□□□□□ -0.82
USP30-210ENST00000539121 ARHGEF5Q12774 1597 aa9.96□□□□□ -0.82
USP30-210ENST00000539121 KCNA4P22459 653 aa9.95□□□□□ -0.82
USP30-210ENST00000539121 HOXD11P31277 338 aaPredicted RBP9.95□□□□□ -0.82
USP30-210ENST00000539121 CPS1P31327 1500 aa9.95□□□□□ -0.82
USP30-210ENST00000539121 POLR1AO95602 1720 aaPredicted RBP9.94□□□□□ -0.82
USP30-210ENST00000539121 TOM1O60784 492 aa9.94□□□□□ -0.82
USP30-210ENST00000539121 MED14O60244 1454 aa9.93□□□□□ -0.82
USP30-210ENST00000539121 SHANK2Q9UPX8 1470 aa9.93□□□□□ -0.82
USP30-210ENST00000539121 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
USP30-210ENST00000539121 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
USP30-210ENST00000539121 UGGT1Q9NYU2 1555 aa9.92□□□□□ -0.82
USP30-210ENST00000539121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.91□□□□□ -0.82
USP30-210ENST00000539121 NPM3O75607 178 aaKnown RBP9.91□□□□□ -0.82
USP30-210ENST00000539121 MAST1Q9Y2H9 1570 aa9.91□□□□□ -0.82
USP30-210ENST00000539121 MAP3K1Q13233 1512 aa9.91□□□□□ -0.82
USP30-210ENST00000539121 LRRC9Q6ZRR7 1453 aa9.91□□□□□ -0.82
USP30-210ENST00000539121 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.82
USP30-210ENST00000539121 RNF17Q9BXT8 1623 aaKnown RBP9.9□□□□□ -0.82
USP30-210ENST00000539121 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.83
USP30-210ENST00000539121 ZC3H13Q5T200 1668 aaKnown RBP9.9□□□□□ -0.83
USP30-210ENST00000539121 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
USP30-210ENST00000539121 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
USP30-210ENST00000539121 ABCC3O15438 1527 aa9.88□□□□□ -0.83
USP30-210ENST00000539121 HSPA1LP34931 641 aa9.88□□□□□ -0.83
USP30-210ENST00000539121 MYOM3Q5VTT5 1437 aa9.88□□□□□ -0.83
USP30-210ENST00000539121 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
USP30-210ENST00000539121 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
USP30-210ENST00000539121 ERVK-7P63135 1459 aa9.86□□□□□ -0.83
USP30-210ENST00000539121 ARHGAP31Q2M1Z3 1444 aa9.86□□□□□ -0.83
USP30-210ENST00000539121 DUOX2Q9NRD8 1548 aa9.86□□□□□ -0.83
USP30-210ENST00000539121 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
USP30-210ENST00000539121 CFAP65Q6ZU64 1925 aaKnown RBP9.85□□□□□ -0.83
USP30-210ENST00000539121 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
USP30-210ENST00000539121 LRRC7Q96NW7 1537 aa9.83□□□□□ -0.84
USP30-210ENST00000539121 KIF15Q9NS87 1388 aa9.83□□□□□ -0.84
USP30-210ENST00000539121 SCAF11Q99590 1463 aaKnown RBP9.83□□□□□ -0.84
USP30-210ENST00000539121 SYNMO15061 1565 aa9.83□□□□□ -0.84
USP30-210ENST00000539121 MED1Q15648 1581 aaPredicted RBP9.83□□□□□ -0.84
USP30-210ENST00000539121 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 SLIT1O75093 1534 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 EID1Q9Y6B2 187 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 ARHGAP23Q9P227 1491 aa9.82□□□□□ -0.84
USP30-210ENST00000539121 PRDM15P57071 1507 aaPredicted RBP9.82□□□□□ -0.84
USP30-210ENST00000539121 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
USP30-210ENST00000539121 LTKP29376 864 aa9.81□□□□□ -0.84
USP30-210ENST00000539121 CEP152O94986 1710 aa9.81□□□□□ -0.84
USP30-210ENST00000539121 ABCC5O15440 1437 aa9.81□□□□□ -0.84
USP30-210ENST00000539121 KANK1Q14678 1352 aa9.8□□□□□ -0.84
USP30-210ENST00000539121 APLP2Q06481 763 aa9.8□□□□□ -0.84
USP30-210ENST00000539121 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
USP30-210ENST00000539121 KDM5AP29375 1690 aaKnown RBP9.79□□□□□ -0.84
USP30-210ENST00000539121 PTPN23Q9H3S7 1636 aa9.78□□□□□ -0.84
USP30-210ENST00000539121 TMEM2Q9UHN6 1383 aa9.78□□□□□ -0.84
USP30-210ENST00000539121 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
USP30-210ENST00000539121 CROCC2H7BZ55 1655 aa9.77□□□□□ -0.84
USP30-210ENST00000539121 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.84
USP30-210ENST00000539121 DAPK1P53355 1430 aa9.77□□□□□ -0.85
USP30-210ENST00000539121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP30-210ENST00000539121 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
USP30-210ENST00000539121 FAM135BQ49AJ0 1406 aa9.76□□□□□ -0.85
USP30-210ENST00000539121 FGD6Q6ZV73 1430 aa9.76□□□□□ -0.85
USP30-210ENST00000539121 IDI1Q13907 227 aa9.76□□□□□ -0.85
USP30-210ENST00000539121 SLC52A1Q9NWF4 448 aa9.76□□□□□ -0.85
USP30-210ENST00000539121 KCNA6P17658 529 aa9.75□□□□□ -0.85
USP30-210ENST00000539121 EFCAB6Q5THR3 1501 aa9.75□□□□□ -0.85
USP30-210ENST00000539121 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms