RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
CRX-202ENST00000539067 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
CRX-202ENST00000539067 PLXNC1O60486 1568 aa17.67■□□□□ 0.42
CRX-202ENST00000539067 KIF3BO15066 747 aa17.67■□□□□ 0.42
CRX-202ENST00000539067 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
CRX-202ENST00000539067 GGT6Q6P531 493 aa17.66■□□□□ 0.42
CRX-202ENST00000539067 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
CRX-202ENST00000539067 ZNF316A6NFI3 1004 aaPredicted RBP17.64■□□□□ 0.41
CRX-202ENST00000539067 DUOX2Q9NRD8 1548 aa17.63■□□□□ 0.41
CRX-202ENST00000539067 PZPP20742 1482 aa17.62■□□□□ 0.41
CRX-202ENST00000539067 REREQ9P2R6 1566 aa17.62■□□□□ 0.41
CRX-202ENST00000539067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
CRX-202ENST00000539067 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
CRX-202ENST00000539067 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
CRX-202ENST00000539067 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
CRX-202ENST00000539067 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
CRX-202ENST00000539067 KDM5DQ9BY66 1539 aa17.59■□□□□ 0.41
CRX-202ENST00000539067 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
CRX-202ENST00000539067 AGLP35573 1532 aa17.59■□□□□ 0.41
CRX-202ENST00000539067 BCORL1Q5H9F3 1711 aa17.58■□□□□ 0.41
CRX-202ENST00000539067 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
CRX-202ENST00000539067 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
CRX-202ENST00000539067 MADDQ8WXG6 1647 aa17.55■□□□□ 0.4
CRX-202ENST00000539067 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
CRX-202ENST00000539067 UNC13BO14795 1591 aa17.54■□□□□ 0.4
CRX-202ENST00000539067 NUP155O75694 1391 aa17.54■□□□□ 0.4
CRX-202ENST00000539067 CEBPAP49715 358 aaPredicted RBP17.52■□□□□ 0.4
CRX-202ENST00000539067 FOXD1Q16676 465 aa17.52■□□□□ 0.4
CRX-202ENST00000539067 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.4
CRX-202ENST00000539067 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
CRX-202ENST00000539067 MROH1Q8NDA8 1641 aa17.52■□□□□ 0.4
CRX-202ENST00000539067 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.39
CRX-202ENST00000539067 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
CRX-202ENST00000539067 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CRX-202ENST00000539067 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
CRX-202ENST00000539067 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
CRX-202ENST00000539067 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
CRX-202ENST00000539067 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
CRX-202ENST00000539067 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
CRX-202ENST00000539067 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
CRX-202ENST00000539067 FAM135AQ9P2D6 1515 aa17.49■□□□□ 0.39
CRX-202ENST00000539067 PKD2Q13563 968 aa17.48■□□□□ 0.39
CRX-202ENST00000539067 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
CRX-202ENST00000539067 CEP152O94986 1710 aa17.47■□□□□ 0.39
CRX-202ENST00000539067 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
CRX-202ENST00000539067 PRDM15P57071 1507 aaPredicted RBP17.45■□□□□ 0.38
CRX-202ENST00000539067 ABCC3O15438 1527 aa17.44■□□□□ 0.38
CRX-202ENST00000539067 ZMYM3Q14202 1370 aa17.44■□□□□ 0.38
CRX-202ENST00000539067 KANK1Q14678 1352 aa17.44■□□□□ 0.38
CRX-202ENST00000539067 PTPRMP28827 1452 aa17.44■□□□□ 0.38
CRX-202ENST00000539067 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
CRX-202ENST00000539067 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
CRX-202ENST00000539067 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
CRX-202ENST00000539067 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CRX-202ENST00000539067 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
CRX-202ENST00000539067 VWDEQ8N2E2 1590 aa17.4■□□□□ 0.38
CRX-202ENST00000539067 C3P01024 1663 aa17.4■□□□□ 0.38
CRX-202ENST00000539067 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
CRX-202ENST00000539067 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
CRX-202ENST00000539067 CAMSAP1Q5T5Y3 1602 aa17.38■□□□□ 0.37
CRX-202ENST00000539067 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
CRX-202ENST00000539067 NPATQ14207 1427 aa17.36■□□□□ 0.37
CRX-202ENST00000539067 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
CRX-202ENST00000539067 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
CRX-202ENST00000539067 LMTK2Q8IWU2 1503 aa17.34■□□□□ 0.37
CRX-202ENST00000539067 TET3O43151 1660 aa17.33■□□□□ 0.36
CRX-202ENST00000539067 E9PCH4 1651 aa17.32■□□□□ 0.36
CRX-202ENST00000539067 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
CRX-202ENST00000539067 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
CRX-202ENST00000539067 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
CRX-202ENST00000539067 ARHGAP31Q2M1Z3 1444 aa17.29■□□□□ 0.36
CRX-202ENST00000539067 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
CRX-202ENST00000539067 PLA2R1Q13018 1463 aa17.28■□□□□ 0.36
CRX-202ENST00000539067 TNRQ92752 1358 aa17.27■□□□□ 0.36
CRX-202ENST00000539067 UGGT1Q9NYU2 1555 aa17.26■□□□□ 0.35
CRX-202ENST00000539067 MIER1Q8N108 512 aa17.26■□□□□ 0.35
CRX-202ENST00000539067 SYNMO15061 1565 aa17.24■□□□□ 0.35
CRX-202ENST00000539067 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
CRX-202ENST00000539067 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
CRX-202ENST00000539067 SPATA31D1Q6ZQQ2 1576 aa17.24■□□□□ 0.35
CRX-202ENST00000539067 HSPA2P54652 639 aa17.24■□□□□ 0.35
CRX-202ENST00000539067 NOS1P29475 1434 aa17.23■□□□□ 0.35
CRX-202ENST00000539067 IDI1Q13907 227 aa17.23■□□□□ 0.35
CRX-202ENST00000539067 UHRF1BP1Q6BDS2 1440 aa17.23■□□□□ 0.35
CRX-202ENST00000539067 TRPM2O94759 1503 aa17.23■□□□□ 0.35
CRX-202ENST00000539067 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
CRX-202ENST00000539067 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
CRX-202ENST00000539067 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.34
CRX-202ENST00000539067 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.34
CRX-202ENST00000539067 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
CRX-202ENST00000539067 PTPRTO14522 1441 aa17.2■□□□□ 0.34
CRX-202ENST00000539067 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
CRX-202ENST00000539067 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
CRX-202ENST00000539067 HSPA5P11021 654 aaKnown RBP17.18■□□□□ 0.34
CRX-202ENST00000539067 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
CRX-202ENST00000539067 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
CRX-202ENST00000539067 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
CRX-202ENST00000539067 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
CRX-202ENST00000539067 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
CRX-202ENST00000539067 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms