RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
CPT1A-204ENST00000538994 FBXO31Q5XUX0 539 aaPredicted RBP17.17■□□□□ 0.34
CPT1A-204ENST00000538994 RNF17Q9BXT8 1623 aaKnown RBP17.17■□□□□ 0.34
CPT1A-204ENST00000538994 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
CPT1A-204ENST00000538994 KDM5DQ9BY66 1539 aa17.16■□□□□ 0.34
CPT1A-204ENST00000538994 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
CPT1A-204ENST00000538994 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
CPT1A-204ENST00000538994 CHIC2Q9UKJ5 165 aa17.14■□□□□ 0.33
CPT1A-204ENST00000538994 DUOX2Q9NRD8 1548 aa17.14■□□□□ 0.33
CPT1A-204ENST00000538994 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
CPT1A-204ENST00000538994 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
CPT1A-204ENST00000538994 MYO3AQ8NEV4 1616 aa17.13■□□□□ 0.33
CPT1A-204ENST00000538994 ABCC3O15438 1527 aa17.12■□□□□ 0.33
CPT1A-204ENST00000538994 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
CPT1A-204ENST00000538994 PZPP20742 1482 aa17.12■□□□□ 0.33
CPT1A-204ENST00000538994 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
CPT1A-204ENST00000538994 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
CPT1A-204ENST00000538994 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
CPT1A-204ENST00000538994 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
CPT1A-204ENST00000538994 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
CPT1A-204ENST00000538994 CAMSAP1Q5T5Y3 1602 aa17.09■□□□□ 0.33
CPT1A-204ENST00000538994 ADGRL2O95490 1459 aa17.08■□□□□ 0.32
CPT1A-204ENST00000538994 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
CPT1A-204ENST00000538994 CEP152O94986 1710 aa17.07■□□□□ 0.32
CPT1A-204ENST00000538994 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
CPT1A-204ENST00000538994 TNRQ92752 1358 aa17.06■□□□□ 0.32
CPT1A-204ENST00000538994 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
CPT1A-204ENST00000538994 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
CPT1A-204ENST00000538994 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
CPT1A-204ENST00000538994 ANKRD30AQ9BXX3 1397 aa17.04■□□□□ 0.32
CPT1A-204ENST00000538994 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
CPT1A-204ENST00000538994 PTPRTO14522 1441 aa17.04■□□□□ 0.32
CPT1A-204ENST00000538994 SPATA31D1Q6ZQQ2 1576 aa17.02■□□□□ 0.32
CPT1A-204ENST00000538994 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
CPT1A-204ENST00000538994 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
CPT1A-204ENST00000538994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.319e-8■■■■□ 24.5
CPT1A-204ENST00000538994 PLA2R1Q13018 1463 aa17■□□□□ 0.31
CPT1A-204ENST00000538994 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
CPT1A-204ENST00000538994 ARHGAP31Q2M1Z3 1444 aa16.98■□□□□ 0.31
CPT1A-204ENST00000538994 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
CPT1A-204ENST00000538994 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
CPT1A-204ENST00000538994 LMTK2Q8IWU2 1503 aa16.97■□□□□ 0.31
CPT1A-204ENST00000538994 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
CPT1A-204ENST00000538994 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
CPT1A-204ENST00000538994 NLRP1Q9C000 1473 aa16.97■□□□□ 0.31
CPT1A-204ENST00000538994 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
CPT1A-204ENST00000538994 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.31
CPT1A-204ENST00000538994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPT1A-204ENST00000538994 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
CPT1A-204ENST00000538994 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
CPT1A-204ENST00000538994 PKD2Q13563 968 aa16.94■□□□□ 0.3
CPT1A-204ENST00000538994 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
CPT1A-204ENST00000538994 ITGAEP38570 1179 aa16.93■□□□□ 0.3
CPT1A-204ENST00000538994 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
CPT1A-204ENST00000538994 SYNMO15061 1565 aa16.91■□□□□ 0.3
CPT1A-204ENST00000538994 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
CPT1A-204ENST00000538994 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
CPT1A-204ENST00000538994 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
CPT1A-204ENST00000538994 KANK1Q14678 1352 aa16.89■□□□□ 0.3
CPT1A-204ENST00000538994 UNC13BO14795 1591 aa16.89■□□□□ 0.3
CPT1A-204ENST00000538994 NOS1P29475 1434 aa16.89■□□□□ 0.29
CPT1A-204ENST00000538994 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
CPT1A-204ENST00000538994 PIK3C2BO00750 1634 aa16.87■□□□□ 0.29
CPT1A-204ENST00000538994 MED14O60244 1454 aa16.86■□□□□ 0.29
CPT1A-204ENST00000538994 LTKP29376 864 aa16.86■□□□□ 0.29
CPT1A-204ENST00000538994 IDI1Q13907 227 aa16.86■□□□□ 0.29
CPT1A-204ENST00000538994 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
CPT1A-204ENST00000538994 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
CPT1A-204ENST00000538994 TET3O43151 1660 aa16.84■□□□□ 0.29
CPT1A-204ENST00000538994 SLIT1O75093 1534 aa16.83■□□□□ 0.28
CPT1A-204ENST00000538994 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
CPT1A-204ENST00000538994 E9PCH4 1651 aa16.81■□□□□ 0.28
CPT1A-204ENST00000538994 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
CPT1A-204ENST00000538994 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
CPT1A-204ENST00000538994 NAIPQ13075 1403 aa16.8■□□□□ 0.28
CPT1A-204ENST00000538994 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
CPT1A-204ENST00000538994 NUP155O75694 1391 aa16.79■□□□□ 0.28
CPT1A-204ENST00000538994 TMEM2Q9UHN6 1383 aa16.79■□□□□ 0.28
CPT1A-204ENST00000538994 IQGAP1P46940 1657 aa16.79■□□□□ 0.28
CPT1A-204ENST00000538994 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
CPT1A-204ENST00000538994 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
CPT1A-204ENST00000538994 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
CPT1A-204ENST00000538994 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
CPT1A-204ENST00000538994 KDM5AP29375 1690 aaKnown RBP16.77■□□□□ 0.28
CPT1A-204ENST00000538994 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
CPT1A-204ENST00000538994 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
CPT1A-204ENST00000538994 TMEM131LA2VDJ0 1609 aa16.74■□□□□ 0.27
CPT1A-204ENST00000538994 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
CPT1A-204ENST00000538994 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
CPT1A-204ENST00000538994 ZFYVE9O95405 1425 aa16.72■□□□□ 0.27
CPT1A-204ENST00000538994 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
CPT1A-204ENST00000538994 CPS1P31327 1500 aa16.7■□□□□ 0.26
CPT1A-204ENST00000538994 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
CPT1A-204ENST00000538994 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
CPT1A-204ENST00000538994 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
CPT1A-204ENST00000538994 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
CPT1A-204ENST00000538994 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
CPT1A-204ENST00000538994 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
CPT1A-204ENST00000538994 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
CPT1A-204ENST00000538994 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms