RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PZPP20742 1482 aa23.17■■□□□ 1.3
SFSWAP-206ENST00000537582 NUP155O75694 1391 aa23.17■■□□□ 1.3
SFSWAP-206ENST00000537582 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
SFSWAP-206ENST00000537582 DEPDC5O75140 1603 aa23.14■■□□□ 1.29
SFSWAP-206ENST00000537582 REREQ9P2R6 1566 aa23.13■■□□□ 1.29
SFSWAP-206ENST00000537582 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
SFSWAP-206ENST00000537582 MPHOSPH9Q99550 1183 aa23.12■■□□□ 1.29
SFSWAP-206ENST00000537582 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
SFSWAP-206ENST00000537582 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
SFSWAP-206ENST00000537582 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
SFSWAP-206ENST00000537582 FOXD1Q16676 465 aa23.1■■□□□ 1.29
SFSWAP-206ENST00000537582 GGT6Q6P531 493 aa23.1■■□□□ 1.29
SFSWAP-206ENST00000537582 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
SFSWAP-206ENST00000537582 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
SFSWAP-206ENST00000537582 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.28
SFSWAP-206ENST00000537582 AGLP35573 1532 aa23.07■■□□□ 1.28
SFSWAP-206ENST00000537582 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
SFSWAP-206ENST00000537582 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
SFSWAP-206ENST00000537582 PKD2Q13563 968 aa23.03■■□□□ 1.28
SFSWAP-206ENST00000537582 MLECQ14165 292 aa23.03■■□□□ 1.28
SFSWAP-206ENST00000537582 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
SFSWAP-206ENST00000537582 KANK1Q14678 1352 aa23.01■■□□□ 1.27
SFSWAP-206ENST00000537582 CEP152O94986 1710 aa23■■□□□ 1.27
SFSWAP-206ENST00000537582 ABCC3O15438 1527 aa22.99■■□□□ 1.27
SFSWAP-206ENST00000537582 WASHC2CQ9Y4E1 1318 aa22.96■■□□□ 1.27
SFSWAP-206ENST00000537582 TET3O43151 1660 aa22.95■■□□□ 1.27
SFSWAP-206ENST00000537582 LMTK2Q8IWU2 1503 aa22.95■■□□□ 1.26
SFSWAP-206ENST00000537582 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
SFSWAP-206ENST00000537582 E9PCH4 1651 aa22.94■■□□□ 1.26
SFSWAP-206ENST00000537582 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
SFSWAP-206ENST00000537582 ANKRD30BQ9BXX2 1392 aa22.92■■□□□ 1.26
SFSWAP-206ENST00000537582 CAMSAP1Q5T5Y3 1602 aa22.9■■□□□ 1.26
SFSWAP-206ENST00000537582 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
SFSWAP-206ENST00000537582 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.26
SFSWAP-206ENST00000537582 ZC3H13Q5T200 1668 aaKnown RBP22.89■■□□□ 1.26
SFSWAP-206ENST00000537582 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
SFSWAP-206ENST00000537582 NPATQ14207 1427 aa22.89■■□□□ 1.25
SFSWAP-206ENST00000537582 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
SFSWAP-206ENST00000537582 PPP6R1Q9UPN7 881 aa22.84■■□□□ 1.25
SFSWAP-206ENST00000537582 PTPRTO14522 1441 aa22.81■■□□□ 1.24
SFSWAP-206ENST00000537582 ARHGAP31Q2M1Z3 1444 aa22.8■■□□□ 1.24
SFSWAP-206ENST00000537582 RPRD2Q5VT52 1461 aaKnown RBP22.8■■□□□ 1.24
SFSWAP-206ENST00000537582 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
SFSWAP-206ENST00000537582 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
SFSWAP-206ENST00000537582 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
SFSWAP-206ENST00000537582 UGGT1Q9NYU2 1555 aa22.79■■□□□ 1.24
SFSWAP-206ENST00000537582 TRPM2O94759 1503 aa22.78■■□□□ 1.24
SFSWAP-206ENST00000537582 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
SFSWAP-206ENST00000537582 FER1L4A9Z1Z3 1794 aa22.78■■□□□ 1.24
SFSWAP-206ENST00000537582 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
SFSWAP-206ENST00000537582 CFAP65Q6ZU64 1925 aaKnown RBP22.77■■□□□ 1.24
SFSWAP-206ENST00000537582 CLTCL1P53675 1640 aa22.75■■□□□ 1.23
SFSWAP-206ENST00000537582 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
SFSWAP-206ENST00000537582 NOS1P29475 1434 aa22.75■■□□□ 1.23
SFSWAP-206ENST00000537582 SYNMO15061 1565 aa22.75■■□□□ 1.23
SFSWAP-206ENST00000537582 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
SFSWAP-206ENST00000537582 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
SFSWAP-206ENST00000537582 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
SFSWAP-206ENST00000537582 ERVK-7P63135 1459 aa22.74■■□□□ 1.23
SFSWAP-206ENST00000537582 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
SFSWAP-206ENST00000537582 MROH2AA6NES4 1674 aa22.72■■□□□ 1.23
SFSWAP-206ENST00000537582 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
SFSWAP-206ENST00000537582 RIMS1Q86UR5 1692 aaKnown RBP22.71■■□□□ 1.23
SFSWAP-206ENST00000537582 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
SFSWAP-206ENST00000537582 C3P01024 1663 aa22.69■■□□□ 1.22
SFSWAP-206ENST00000537582 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
SFSWAP-206ENST00000537582 SPATA31D1Q6ZQQ2 1576 aa22.68■■□□□ 1.22
SFSWAP-206ENST00000537582 L3MBTL2Q969R5 705 aa22.65■■□□□ 1.22
SFSWAP-206ENST00000537582 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
SFSWAP-206ENST00000537582 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
SFSWAP-206ENST00000537582 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
SFSWAP-206ENST00000537582 IDI1Q13907 227 aa22.63■■□□□ 1.21
SFSWAP-206ENST00000537582 TNRQ92752 1358 aa22.6■■□□□ 1.21
SFSWAP-206ENST00000537582 CHGAP10645 457 aaKnown RBP22.59■■□□□ 1.21
SFSWAP-206ENST00000537582 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
SFSWAP-206ENST00000537582 TIMELESSQ9UNS1 1208 aa22.58■■□□□ 1.2
SFSWAP-206ENST00000537582 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
SFSWAP-206ENST00000537582 PTPRMP28827 1452 aa22.57■■□□□ 1.2
SFSWAP-206ENST00000537582 KDM4FA0A1W2PPD8 638 aa22.56■■□□□ 1.2
SFSWAP-206ENST00000537582 KIF1BO60333 1816 aa22.56■■□□□ 1.2
SFSWAP-206ENST00000537582 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
SFSWAP-206ENST00000537582 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
SFSWAP-206ENST00000537582 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
SFSWAP-206ENST00000537582 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
SFSWAP-206ENST00000537582 NEURL4Q96JN8 1562 aa22.51■■□□□ 1.19
SFSWAP-206ENST00000537582 MYO5BQ9ULV0 1848 aa22.51■■□□□ 1.19
SFSWAP-206ENST00000537582 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
SFSWAP-206ENST00000537582 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SFSWAP-206ENST00000537582 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
SFSWAP-206ENST00000537582 A2ML1A8K2U0 1454 aa22.48■■□□□ 1.19
SFSWAP-206ENST00000537582 NLRP1Q9C000 1473 aa22.47■■□□□ 1.19
SFSWAP-206ENST00000537582 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
SFSWAP-206ENST00000537582 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
SFSWAP-206ENST00000537582 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
SFSWAP-206ENST00000537582 IFT172Q9UG01 1749 aa22.45■■□□□ 1.18
SFSWAP-206ENST00000537582 UBR1Q8IWV7 1749 aa22.44■■□□□ 1.18
SFSWAP-206ENST00000537582 PPLO60437 1756 aa22.42■■□□□ 1.18
SFSWAP-206ENST00000537582 ADGRF5Q8IZF2 1346 aa22.42■■□□□ 1.18
SFSWAP-206ENST00000537582 UHRF1BP1Q6BDS2 1440 aa22.42■■□□□ 1.18
SFSWAP-206ENST00000537582 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms