RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
ATN1-203ENST00000537488 MYO3AQ8NEV4 1616 aa25.54■■□□□ 1.68
ATN1-203ENST00000537488 FBXO31Q5XUX0 539 aaPredicted RBP25.53■■□□□ 1.68
ATN1-203ENST00000537488 KDM5DQ9BY66 1539 aa25.53■■□□□ 1.68
ATN1-203ENST00000537488 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
ATN1-203ENST00000537488 RRP7BPQ9NSQ0 103 aa25.52■■□□□ 1.68
ATN1-203ENST00000537488 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
ATN1-203ENST00000537488 WASHC2CQ9Y4E1 1318 aa25.51■■□□□ 1.67
ATN1-203ENST00000537488 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
ATN1-203ENST00000537488 SHANK2Q9UPX8 1470 aa25.5■■□□□ 1.67
ATN1-203ENST00000537488 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
ATN1-203ENST00000537488 DUOX2Q9NRD8 1548 aa25.49■■□□□ 1.67
ATN1-203ENST00000537488 CEP152O94986 1710 aa25.49■■□□□ 1.67
ATN1-203ENST00000537488 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
ATN1-203ENST00000537488 ZNF142P52746 1687 aaPredicted RBP25.48■■□□□ 1.67
ATN1-203ENST00000537488 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
ATN1-203ENST00000537488 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
ATN1-203ENST00000537488 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
ATN1-203ENST00000537488 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
ATN1-203ENST00000537488 ABCC3O15438 1527 aa25.45■■□□□ 1.66
ATN1-203ENST00000537488 PZPP20742 1482 aa25.44■■□□□ 1.66
ATN1-203ENST00000537488 NCOA1Q15788 1441 aa25.44■■□□□ 1.66
ATN1-203ENST00000537488 FAM135AQ9P2D6 1515 aa25.42■■□□□ 1.66
ATN1-203ENST00000537488 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
ATN1-203ENST00000537488 TNRQ92752 1358 aa25.41■■□□□ 1.66
ATN1-203ENST00000537488 ZC3H13Q5T200 1668 aaKnown RBP25.39■■□□□ 1.66
ATN1-203ENST00000537488 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
ATN1-203ENST00000537488 A2ML1A8K2U0 1454 aa25.37■■□□□ 1.65
ATN1-203ENST00000537488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
ATN1-203ENST00000537488 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
ATN1-203ENST00000537488 DMRT2Q9Y5R5 561 aa25.36■■□□□ 1.65
ATN1-203ENST00000537488 PTPRTO14522 1441 aa25.36■■□□□ 1.65
ATN1-203ENST00000537488 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
ATN1-203ENST00000537488 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
ATN1-203ENST00000537488 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
ATN1-203ENST00000537488 ADGRL2O95490 1459 aa25.33■■□□□ 1.65
ATN1-203ENST00000537488 CERKQ8TCT0 537 aa25.32■■□□□ 1.64
ATN1-203ENST00000537488 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
ATN1-203ENST00000537488 ERVK-7P63135 1459 aa25.3■■□□□ 1.64
ATN1-203ENST00000537488 PLA2R1Q13018 1463 aa25.29■■□□□ 1.64
ATN1-203ENST00000537488 ITGAEP38570 1179 aa25.26■■□□□ 1.63
ATN1-203ENST00000537488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
ATN1-203ENST00000537488 LTBP4Q8N2S1 1624 aa25.25■■□□□ 1.63
ATN1-203ENST00000537488 POLR1AO95602 1720 aaPredicted RBP25.25■■□□□ 1.63
ATN1-203ENST00000537488 VWDEQ8N2E2 1590 aa25.24■■□□□ 1.63
ATN1-203ENST00000537488 UGGT1Q9NYU2 1555 aa25.24■■□□□ 1.63
ATN1-203ENST00000537488 NLRP1Q9C000 1473 aa25.24■■□□□ 1.63
ATN1-203ENST00000537488 NEURL4Q96JN8 1562 aa25.23■■□□□ 1.63
ATN1-203ENST00000537488 PKD2Q13563 968 aa25.23■■□□□ 1.63
ATN1-203ENST00000537488 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
ATN1-203ENST00000537488 KANK1Q14678 1352 aa25.2■■□□□ 1.63
ATN1-203ENST00000537488 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.62
ATN1-203ENST00000537488 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.62
ATN1-203ENST00000537488 UBR1Q8IWV7 1749 aa25.18■■□□□ 1.62
ATN1-203ENST00000537488 LMTK2Q8IWU2 1503 aa25.17■■□□□ 1.62
ATN1-203ENST00000537488 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
ATN1-203ENST00000537488 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
ATN1-203ENST00000537488 PIK3C2BO00750 1634 aa25.13■■□□□ 1.61
ATN1-203ENST00000537488 ANKLE2Q86XL3 938 aa25.13■■□□□ 1.61
ATN1-203ENST00000537488 ROCK1Q13464 1354 aa25.12■■□□□ 1.61
ATN1-203ENST00000537488 SYNMO15061 1565 aa25.12■■□□□ 1.61
ATN1-203ENST00000537488 UNC13BO14795 1591 aa25.11■■□□□ 1.61
ATN1-203ENST00000537488 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
ATN1-203ENST00000537488 TET3O43151 1660 aa25.07■■□□□ 1.6
ATN1-203ENST00000537488 NPHP4O75161 1426 aaPredicted RBP25.07■■□□□ 1.6
ATN1-203ENST00000537488 IDI1Q13907 227 aa25.07■■□□□ 1.6
ATN1-203ENST00000537488 IQGAP1P46940 1657 aa25.07■■□□□ 1.6
ATN1-203ENST00000537488 NOS1P29475 1434 aa25.05■■□□□ 1.6
ATN1-203ENST00000537488 GCC2Q8IWJ2 1684 aa25.05■■□□□ 1.6
ATN1-203ENST00000537488 MED14O60244 1454 aa25.05■■□□□ 1.6
ATN1-203ENST00000537488 LTKP29376 864 aa25.04■■□□□ 1.6
ATN1-203ENST00000537488 E9PCH4 1651 aa25.03■■□□□ 1.6
ATN1-203ENST00000537488 MYO5BQ9ULV0 1848 aa25.02■■□□□ 1.6
ATN1-203ENST00000537488 ARHGAP23Q9P227 1491 aa25.02■■□□□ 1.6
ATN1-203ENST00000537488 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
ATN1-203ENST00000537488 SLIT1O75093 1534 aa25.01■■□□□ 1.59
ATN1-203ENST00000537488 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
ATN1-203ENST00000537488 TXNDC2Q86VQ3 553 aa24.99■■□□□ 1.59
ATN1-203ENST00000537488 SCAF11Q99590 1463 aaKnown RBP24.98■■□□□ 1.59
ATN1-203ENST00000537488 STAG3Q9UJ98 1225 aa24.98■■□□□ 1.59
ATN1-203ENST00000537488 NUP155O75694 1391 aa24.97■■□□□ 1.59
ATN1-203ENST00000537488 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
ATN1-203ENST00000537488 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
ATN1-203ENST00000537488 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.59
ATN1-203ENST00000537488 KDM5AP29375 1690 aaKnown RBP24.95■■□□□ 1.58
ATN1-203ENST00000537488 ADGRB3O60242 1522 aa24.95■■□□□ 1.58
ATN1-203ENST00000537488 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
ATN1-203ENST00000537488 NAIPQ13075 1403 aa24.92■■□□□ 1.58
ATN1-203ENST00000537488 SLC52A1Q9NWF4 448 aa24.91■■□□□ 1.58
ATN1-203ENST00000537488 UBAP1LF5GYI3 381 aa24.9■■□□□ 1.58
ATN1-203ENST00000537488 EID1Q9Y6B2 187 aa24.9■■□□□ 1.58
ATN1-203ENST00000537488 CPS1P31327 1500 aa24.9■■□□□ 1.58
ATN1-203ENST00000537488 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
ATN1-203ENST00000537488 CHGAP10645 457 aaKnown RBP24.85■■□□□ 1.57
ATN1-203ENST00000537488 SLC26A8Q96RN1 970 aa24.83■■□□□ 1.57
ATN1-203ENST00000537488 LRRC7Q96NW7 1537 aa24.82■■□□□ 1.56
ATN1-203ENST00000537488 SPHKAPQ2M3C7 1700 aa24.82■■□□□ 1.56
ATN1-203ENST00000537488 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
ATN1-203ENST00000537488 NUTM2DQ5VT03 806 aaPredicted RBP24.81■■□□□ 1.56
ATN1-203ENST00000537488 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms