RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 ZMYM3Q14202 1370 aa26.68■■□□□ 1.86
GPN3-202ENST00000537466 RRP7BPQ9NSQ0 103 aa26.67■■□□□ 1.86
GPN3-202ENST00000537466 PPP6R1Q9UPN7 881 aa26.66■■□□□ 1.86
GPN3-202ENST00000537466 MROH1Q8NDA8 1641 aa26.65■■□□□ 1.86
GPN3-202ENST00000537466 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
GPN3-202ENST00000537466 ADGRL2O95490 1459 aa26.64■■□□□ 1.85
GPN3-202ENST00000537466 NCOA1Q15788 1441 aa26.63■■□□□ 1.85
GPN3-202ENST00000537466 ANKRD30AQ9BXX3 1397 aa26.63■■□□□ 1.85
GPN3-202ENST00000537466 FAM135AQ9P2D6 1515 aa26.62■■□□□ 1.85
GPN3-202ENST00000537466 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
GPN3-202ENST00000537466 ERBINQ96RT1 1412 aa26.61■■□□□ 1.85
GPN3-202ENST00000537466 CEP152O94986 1710 aa26.6■■□□□ 1.85
GPN3-202ENST00000537466 ZC3H13Q5T200 1668 aaKnown RBP26.6■■□□□ 1.85
GPN3-202ENST00000537466 HSPA2P54652 639 aa26.59■■□□□ 1.85
GPN3-202ENST00000537466 NPATQ14207 1427 aa26.57■■□□□ 1.84
GPN3-202ENST00000537466 DEPDC5O75140 1603 aa26.57■■□□□ 1.84
GPN3-202ENST00000537466 WASHC2CQ9Y4E1 1318 aa26.57■■□□□ 1.84
GPN3-202ENST00000537466 UHRF1BP1Q6BDS2 1440 aa26.57■■□□□ 1.84
GPN3-202ENST00000537466 ABCC3O15438 1527 aa26.56■■□□□ 1.84
GPN3-202ENST00000537466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
GPN3-202ENST00000537466 PRDM15P57071 1507 aaPredicted RBP26.55■■□□□ 1.84
GPN3-202ENST00000537466 RRBP1Q9P2E9 1410 aaKnown RBP26.54■■□□□ 1.84
GPN3-202ENST00000537466 MYO3AQ8NEV4 1616 aa26.54■■□□□ 1.84
GPN3-202ENST00000537466 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
GPN3-202ENST00000537466 PZPP20742 1482 aa26.51■■□□□ 1.83
GPN3-202ENST00000537466 ITGAEP38570 1179 aa26.5■■□□□ 1.83
GPN3-202ENST00000537466 CFAP65Q6ZU64 1925 aaKnown RBP26.49■■□□□ 1.83
GPN3-202ENST00000537466 ZNF142P52746 1687 aaPredicted RBP26.49■■□□□ 1.83
GPN3-202ENST00000537466 FBXO31Q5XUX0 539 aaPredicted RBP26.47■■□□□ 1.83
GPN3-202ENST00000537466 ANKRD50Q9ULJ7 1429 aa26.47■■□□□ 1.83
GPN3-202ENST00000537466 STRCQ7RTU9 1775 aa26.46■■□□□ 1.83
GPN3-202ENST00000537466 ROCK1Q13464 1354 aa26.46■■□□□ 1.83
GPN3-202ENST00000537466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.829e-6■■■□□ 18.9
GPN3-202ENST00000537466 VWDEQ8N2E2 1590 aa26.44■■□□□ 1.82
GPN3-202ENST00000537466 CEP170BQ9Y4F5 1589 aaPredicted RBP26.44■■□□□ 1.82
GPN3-202ENST00000537466 TNRQ92752 1358 aa26.4■■□□□ 1.82
GPN3-202ENST00000537466 SPATA31D1Q6ZQQ2 1576 aa26.39■■□□□ 1.82
GPN3-202ENST00000537466 KANK1Q14678 1352 aa26.39■■□□□ 1.81
GPN3-202ENST00000537466 UNC13BO14795 1591 aa26.38■■□□□ 1.81
GPN3-202ENST00000537466 LMTK2Q8IWU2 1503 aa26.37■■□□□ 1.81
GPN3-202ENST00000537466 ERVK-7P63135 1459 aa26.37■■□□□ 1.81
GPN3-202ENST00000537466 A2ML1A8K2U0 1454 aa26.36■■□□□ 1.81
GPN3-202ENST00000537466 ARHGAP31Q2M1Z3 1444 aa26.35■■□□□ 1.81
GPN3-202ENST00000537466 EFCAB6Q5THR3 1501 aa26.32■■□□□ 1.8
GPN3-202ENST00000537466 GCC2Q8IWJ2 1684 aa26.32■■□□□ 1.8
GPN3-202ENST00000537466 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
GPN3-202ENST00000537466 TET3O43151 1660 aa26.29■■□□□ 1.8
GPN3-202ENST00000537466 IQGAP3Q86VI3 1631 aa26.27■■□□□ 1.8
GPN3-202ENST00000537466 PLA2R1Q13018 1463 aa26.26■■□□□ 1.79
GPN3-202ENST00000537466 UGGT1Q9NYU2 1555 aa26.25■■□□□ 1.79
GPN3-202ENST00000537466 NAIPQ13075 1403 aa26.25■■□□□ 1.79
GPN3-202ENST00000537466 POLR1AO95602 1720 aaPredicted RBP26.23■■□□□ 1.79
GPN3-202ENST00000537466 UBR1Q8IWV7 1749 aa26.23■■□□□ 1.79
GPN3-202ENST00000537466 E9PCH4 1651 aa26.23■■□□□ 1.79
GPN3-202ENST00000537466 SYNMO15061 1565 aa26.23■■□□□ 1.79
GPN3-202ENST00000537466 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
GPN3-202ENST00000537466 DMRT2Q9Y5R5 561 aa26.2■■□□□ 1.78
GPN3-202ENST00000537466 PIK3C2BO00750 1634 aa26.2■■□□□ 1.78
GPN3-202ENST00000537466 PTPRTO14522 1441 aa26.2■■□□□ 1.78
GPN3-202ENST00000537466 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
GPN3-202ENST00000537466 RPRD2Q5VT52 1461 aaKnown RBP26.18■■□□□ 1.78
GPN3-202ENST00000537466 NOS1P29475 1434 aa26.18■■□□□ 1.78
GPN3-202ENST00000537466 NUP155O75694 1391 aa26.18■■□□□ 1.78
GPN3-202ENST00000537466 NEURL4Q96JN8 1562 aa26.15■■□□□ 1.78
GPN3-202ENST00000537466 PKD2Q13563 968 aa26.15■■□□□ 1.78
GPN3-202ENST00000537466 THEMISQ8N1K5 641 aaPredicted RBP26.15■■□□□ 1.78
GPN3-202ENST00000537466 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
GPN3-202ENST00000537466 MYO5BQ9ULV0 1848 aa26.1■■□□□ 1.77
GPN3-202ENST00000537466 IDI1Q13907 227 aa26.1■■□□□ 1.77
GPN3-202ENST00000537466 ANKLE2Q86XL3 938 aa26.06■■□□□ 1.76
GPN3-202ENST00000537466 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
GPN3-202ENST00000537466 ADGRB3O60242 1522 aa26.05■■□□□ 1.76
GPN3-202ENST00000537466 SLIT1O75093 1534 aa26.05■■□□□ 1.76
GPN3-202ENST00000537466 ARHGAP23Q9P227 1491 aa26.05■■□□□ 1.76
GPN3-202ENST00000537466 IQGAP1P46940 1657 aa26.04■■□□□ 1.76
GPN3-202ENST00000537466 MED14O60244 1454 aa26.03■■□□□ 1.76
GPN3-202ENST00000537466 SLC52A1Q9NWF4 448 aa26.03■■□□□ 1.76
GPN3-202ENST00000537466 STAG3Q9UJ98 1225 aa26.02■■□□□ 1.76
GPN3-202ENST00000537466 LTBP4Q8N2S1 1624 aa26.02■■□□□ 1.76
GPN3-202ENST00000537466 TMEM131LA2VDJ0 1609 aa26■■□□□ 1.75
GPN3-202ENST00000537466 NPHP4O75161 1426 aaPredicted RBP26■■□□□ 1.75
GPN3-202ENST00000537466 TRIM52Q96A61 297 aa25.99■■□□□ 1.75
GPN3-202ENST00000537466 SCAF11Q99590 1463 aaKnown RBP25.99■■□□□ 1.75
GPN3-202ENST00000537466 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
GPN3-202ENST00000537466 LTKP29376 864 aa25.98■■□□□ 1.75
GPN3-202ENST00000537466 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
GPN3-202ENST00000537466 CERKQ8TCT0 537 aa25.97■■□□□ 1.75
GPN3-202ENST00000537466 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
GPN3-202ENST00000537466 ILDR1Q86SU0 546 aaPredicted RBP25.92■■□□□ 1.74
GPN3-202ENST00000537466 SETD5Q9C0A6 1442 aa25.92■■□□□ 1.74
GPN3-202ENST00000537466 CLTCL1P53675 1640 aa25.92■■□□□ 1.74
GPN3-202ENST00000537466 EID1Q9Y6B2 187 aa25.91■■□□□ 1.74
GPN3-202ENST00000537466 TRPM2O94759 1503 aa25.9■■□□□ 1.74
GPN3-202ENST00000537466 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
GPN3-202ENST00000537466 CHGAP10645 457 aaKnown RBP25.89■■□□□ 1.73
GPN3-202ENST00000537466 STRCP1A6NGW2 1772 aa25.89■■□□□ 1.73
GPN3-202ENST00000537466 ZFYVE9O95405 1425 aa25.88■■□□□ 1.73
GPN3-202ENST00000537466 KIF1BO60333 1816 aa25.87■■□□□ 1.73
GPN3-202ENST00000537466 FBXO41Q8TF61 875 aa25.85■■□□□ 1.73
GPN3-202ENST00000537466 RAB3GAP2Q9H2M9 1393 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms