RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
CCDC170-202ENST00000537358 MYO3AQ8NEV4 1616 aa15.47■□□□□ 0.07
CCDC170-202ENST00000537358 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
CCDC170-202ENST00000537358 PTPRKQ15262 1439 aa15.46■□□□□ 0.07
CCDC170-202ENST00000537358 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
CCDC170-202ENST00000537358 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
CCDC170-202ENST00000537358 KDM5DQ9BY66 1539 aa15.44■□□□□ 0.06
CCDC170-202ENST00000537358 WASHC2CQ9Y4E1 1318 aa15.43■□□□□ 0.06
CCDC170-202ENST00000537358 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
CCDC170-202ENST00000537358 PKD2Q13563 968 aa15.43■□□□□ 0.06
CCDC170-202ENST00000537358 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
CCDC170-202ENST00000537358 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
CCDC170-202ENST00000537358 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
CCDC170-202ENST00000537358 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
CCDC170-202ENST00000537358 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
CCDC170-202ENST00000537358 PZPP20742 1482 aa15.4■□□□□ 0.06
CCDC170-202ENST00000537358 TNRQ92752 1358 aa15.39■□□□□ 0.05
CCDC170-202ENST00000537358 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
CCDC170-202ENST00000537358 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
CCDC170-202ENST00000537358 EIF2AK4Q9P2K8 1649 aaKnown RBP15.38■□□□□ 0.05
CCDC170-202ENST00000537358 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
CCDC170-202ENST00000537358 DNMT1P26358 1616 aaKnown RBP15.37■□□□□ 0.05
CCDC170-202ENST00000537358 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
CCDC170-202ENST00000537358 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
CCDC170-202ENST00000537358 TCOF1Q13428 1488 aaKnown RBP15.36■□□□□ 0.05
CCDC170-202ENST00000537358 LTBP4Q8N2S1 1624 aa15.35■□□□□ 0.05
CCDC170-202ENST00000537358 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
CCDC170-202ENST00000537358 DUOX2Q9NRD8 1548 aa15.34■□□□□ 0.05
CCDC170-202ENST00000537358 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
CCDC170-202ENST00000537358 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
CCDC170-202ENST00000537358 NLRP1Q9C000 1473 aa15.33■□□□□ 0.05
CCDC170-202ENST00000537358 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
CCDC170-202ENST00000537358 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
CCDC170-202ENST00000537358 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
CCDC170-202ENST00000537358 ZNF335Q9H4Z2 1342 aaPredicted RBP15.31■□□□□ 0.04
CCDC170-202ENST00000537358 ABCC3O15438 1527 aa15.31■□□□□ 0.04
CCDC170-202ENST00000537358 ANKLE2Q86XL3 938 aa15.3■□□□□ 0.04
CCDC170-202ENST00000537358 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
CCDC170-202ENST00000537358 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
CCDC170-202ENST00000537358 CEP152O94986 1710 aa15.29■□□□□ 0.04
CCDC170-202ENST00000537358 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
CCDC170-202ENST00000537358 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
CCDC170-202ENST00000537358 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
CCDC170-202ENST00000537358 ABCC5O15440 1437 aa15.27■□□□□ 0.04
CCDC170-202ENST00000537358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCDC170-202ENST00000537358 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
CCDC170-202ENST00000537358 SPATA31D1Q6ZQQ2 1576 aa15.27■□□□□ 0.03
CCDC170-202ENST00000537358 DAPK1P53355 1430 aa15.26■□□□□ 0.03
CCDC170-202ENST00000537358 KANK1Q14678 1352 aa15.26■□□□□ 0.03
CCDC170-202ENST00000537358 MROH1Q8NDA8 1641 aa15.26■□□□□ 0.03
CCDC170-202ENST00000537358 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
CCDC170-202ENST00000537358 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
CCDC170-202ENST00000537358 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
CCDC170-202ENST00000537358 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
CCDC170-202ENST00000537358 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
CCDC170-202ENST00000537358 PRDM15P57071 1507 aaPredicted RBP15.24■□□□□ 0.03
CCDC170-202ENST00000537358 CPS1P31327 1500 aa15.23■□□□□ 0.03
CCDC170-202ENST00000537358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCDC170-202ENST00000537358 NPHP4O75161 1426 aaPredicted RBP15.22■□□□□ 0.03
CCDC170-202ENST00000537358 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
CCDC170-202ENST00000537358 ARHGAP31Q2M1Z3 1444 aa15.21■□□□□ 0.03
CCDC170-202ENST00000537358 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
CCDC170-202ENST00000537358 DISP3Q9P2K9 1392 aa15.21■□□□□ 0.02
CCDC170-202ENST00000537358 MED14O60244 1454 aa15.2■□□□□ 0.02
CCDC170-202ENST00000537358 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
CCDC170-202ENST00000537358 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
CCDC170-202ENST00000537358 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
CCDC170-202ENST00000537358 TOM1O60784 492 aa15.17■□□□□ 0.02
CCDC170-202ENST00000537358 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
CCDC170-202ENST00000537358 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
CCDC170-202ENST00000537358 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
CCDC170-202ENST00000537358 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
CCDC170-202ENST00000537358 SCAF11Q99590 1463 aaKnown RBP15.15■□□□□ 0.02
CCDC170-202ENST00000537358 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
CCDC170-202ENST00000537358 TXNDC2Q86VQ3 553 aa15.13■□□□□ 0.01
CCDC170-202ENST00000537358 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
CCDC170-202ENST00000537358 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
CCDC170-202ENST00000537358 SLIT1O75093 1534 aa15.12■□□□□ 0.01
CCDC170-202ENST00000537358 KCNA4P22459 653 aa15.12■□□□□ 0.01
CCDC170-202ENST00000537358 PIP4K2BP78356 416 aa15.12■□□□□ 0.01
CCDC170-202ENST00000537358 SYNMO15061 1565 aa15.11■□□□□ 0.01
CCDC170-202ENST00000537358 ANKRD50Q9ULJ7 1429 aa15.11■□□□□ 0.01
CCDC170-202ENST00000537358 ARHGAP23Q9P227 1491 aa15.11■□□□□ 0.01
CCDC170-202ENST00000537358 EFCAB6Q5THR3 1501 aa15.11■□□□□ 0.01
CCDC170-202ENST00000537358 TMEM2Q9UHN6 1383 aa15.09■□□□□ 0.01
CCDC170-202ENST00000537358 LTKP29376 864 aa15.08■□□□□ 0
CCDC170-202ENST00000537358 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
CCDC170-202ENST00000537358 RPRD2Q5VT52 1461 aaKnown RBP15.08■□□□□ 0
CCDC170-202ENST00000537358 STRCP1A6NGW2 1772 aa15.07■□□□□ 0
CCDC170-202ENST00000537358 IDI1Q13907 227 aa15.07■□□□□ 0
CCDC170-202ENST00000537358 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
CCDC170-202ENST00000537358 TET3O43151 1660 aa15.06■□□□□ 0
CCDC170-202ENST00000537358 LRRC7Q96NW7 1537 aa15.06■□□□□ 0
CCDC170-202ENST00000537358 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
CCDC170-202ENST00000537358 NOS1P29475 1434 aa15.05■□□□□ -0
CCDC170-202ENST00000537358 ADGRB3O60242 1522 aa15.05■□□□□ -0
CCDC170-202ENST00000537358 HSPA1LP34931 641 aa15.04■□□□□ -0
CCDC170-202ENST00000537358 ROCK1Q13464 1354 aa15.03■□□□□ -0
CCDC170-202ENST00000537358 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
CCDC170-202ENST00000537358 BCANQ96GW7 911 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms