RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 DAPK1P53355 1430 aa16.83■□□□□ 0.28
LDHA-215ENST00000537296 GGT6Q6P531 493 aa16.83■□□□□ 0.28
LDHA-215ENST00000537296 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
LDHA-215ENST00000537296 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
LDHA-215ENST00000537296 KIF3BO15066 747 aa16.8■□□□□ 0.28
LDHA-215ENST00000537296 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
LDHA-215ENST00000537296 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
LDHA-215ENST00000537296 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
LDHA-215ENST00000537296 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
LDHA-215ENST00000537296 CHIC2Q9UKJ5 165 aa16.77■□□□□ 0.28
LDHA-215ENST00000537296 HSPA2P54652 639 aa16.76■□□□□ 0.27
LDHA-215ENST00000537296 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
LDHA-215ENST00000537296 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
LDHA-215ENST00000537296 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
LDHA-215ENST00000537296 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
LDHA-215ENST00000537296 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
LDHA-215ENST00000537296 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
LDHA-215ENST00000537296 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
LDHA-215ENST00000537296 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
LDHA-215ENST00000537296 PTPRKQ15262 1439 aa16.73■□□□□ 0.27
LDHA-215ENST00000537296 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
LDHA-215ENST00000537296 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
LDHA-215ENST00000537296 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
LDHA-215ENST00000537296 CEP152O94986 1710 aa16.7■□□□□ 0.26
LDHA-215ENST00000537296 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
LDHA-215ENST00000537296 ANKRD30AQ9BXX3 1397 aa16.69■□□□□ 0.26
LDHA-215ENST00000537296 UHRF1BP1Q6BDS2 1440 aa16.69■□□□□ 0.26
LDHA-215ENST00000537296 NPATQ14207 1427 aa16.68■□□□□ 0.26
LDHA-215ENST00000537296 ERBINQ96RT1 1412 aa16.68■□□□□ 0.26
LDHA-215ENST00000537296 ABCC3O15438 1527 aa16.68■□□□□ 0.26
LDHA-215ENST00000537296 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
LDHA-215ENST00000537296 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
LDHA-215ENST00000537296 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
LDHA-215ENST00000537296 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
LDHA-215ENST00000537296 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
LDHA-215ENST00000537296 ZC3H13Q5T200 1668 aaKnown RBP16.66■□□□□ 0.26
LDHA-215ENST00000537296 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
LDHA-215ENST00000537296 ITGAEP38570 1179 aa16.65■□□□□ 0.26
LDHA-215ENST00000537296 STRCQ7RTU9 1775 aa16.65■□□□□ 0.26
LDHA-215ENST00000537296 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
LDHA-215ENST00000537296 PZPP20742 1482 aa16.64■□□□□ 0.25
LDHA-215ENST00000537296 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
LDHA-215ENST00000537296 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
LDHA-215ENST00000537296 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
LDHA-215ENST00000537296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDHA-215ENST00000537296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
LDHA-215ENST00000537296 CEP170BQ9Y4F5 1589 aaPredicted RBP16.61■□□□□ 0.25
LDHA-215ENST00000537296 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
LDHA-215ENST00000537296 VWDEQ8N2E2 1590 aa16.59■□□□□ 0.25
LDHA-215ENST00000537296 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
LDHA-215ENST00000537296 TNRQ92752 1358 aa16.58■□□□□ 0.25
LDHA-215ENST00000537296 ROCK1Q13464 1354 aa16.58■□□□□ 0.24
LDHA-215ENST00000537296 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
LDHA-215ENST00000537296 SPATA31D1Q6ZQQ2 1576 aa16.57■□□□□ 0.24
LDHA-215ENST00000537296 ERVK-7P63135 1459 aa16.56■□□□□ 0.24
LDHA-215ENST00000537296 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
LDHA-215ENST00000537296 UNC13BO14795 1591 aa16.54■□□□□ 0.24
LDHA-215ENST00000537296 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
LDHA-215ENST00000537296 KANK1Q14678 1352 aa16.53■□□□□ 0.24
LDHA-215ENST00000537296 ARHGAP31Q2M1Z3 1444 aa16.52■□□□□ 0.24
LDHA-215ENST00000537296 EFCAB6Q5THR3 1501 aa16.52■□□□□ 0.23
LDHA-215ENST00000537296 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
LDHA-215ENST00000537296 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
LDHA-215ENST00000537296 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
LDHA-215ENST00000537296 TET3O43151 1660 aa16.48■□□□□ 0.23
LDHA-215ENST00000537296 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
LDHA-215ENST00000537296 SYNMO15061 1565 aa16.48■□□□□ 0.23
LDHA-215ENST00000537296 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
LDHA-215ENST00000537296 UBR1Q8IWV7 1749 aa16.47■□□□□ 0.23
LDHA-215ENST00000537296 IQGAP3Q86VI3 1631 aa16.47■□□□□ 0.23
LDHA-215ENST00000537296 POLR1AO95602 1720 aaPredicted RBP16.47■□□□□ 0.23
LDHA-215ENST00000537296 NAIPQ13075 1403 aa16.46■□□□□ 0.23
LDHA-215ENST00000537296 PIK3C2BO00750 1634 aa16.46■□□□□ 0.23
LDHA-215ENST00000537296 E9PCH4 1651 aa16.46■□□□□ 0.23
LDHA-215ENST00000537296 PTPRTO14522 1441 aa16.45■□□□□ 0.22
LDHA-215ENST00000537296 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
LDHA-215ENST00000537296 NOS1P29475 1434 aa16.43■□□□□ 0.22
LDHA-215ENST00000537296 NUP155O75694 1391 aa16.43■□□□□ 0.22
LDHA-215ENST00000537296 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LDHA-215ENST00000537296 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
LDHA-215ENST00000537296 PKD2Q13563 968 aa16.4■□□□□ 0.22
LDHA-215ENST00000537296 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
LDHA-215ENST00000537296 MYO5BQ9ULV0 1848 aa16.4■□□□□ 0.22
LDHA-215ENST00000537296 IDI1Q13907 227 aa16.4■□□□□ 0.22
LDHA-215ENST00000537296 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
LDHA-215ENST00000537296 ILDR1Q86SU0 546 aaPredicted RBP16.37■□□□□ 0.21
LDHA-215ENST00000537296 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
LDHA-215ENST00000537296 ANKLE2Q86XL3 938 aa16.36■□□□□ 0.21
LDHA-215ENST00000537296 ADGRB3O60242 1522 aa16.36■□□□□ 0.21
LDHA-215ENST00000537296 KDM5AP29375 1690 aaKnown RBP16.36■□□□□ 0.21
LDHA-215ENST00000537296 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
LDHA-215ENST00000537296 SLIT1O75093 1534 aa16.35■□□□□ 0.21
LDHA-215ENST00000537296 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
LDHA-215ENST00000537296 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
LDHA-215ENST00000537296 MED14O60244 1454 aa16.34■□□□□ 0.21
LDHA-215ENST00000537296 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
LDHA-215ENST00000537296 LTKP29376 864 aa16.34■□□□□ 0.21
LDHA-215ENST00000537296 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
LDHA-215ENST00000537296 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.2
LDHA-215ENST00000537296 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms