RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 DUOX2Q9NRD8 1548 aa26.7■■□□□ 1.87
SFSWAP-205ENST00000537164 HSPA2P54652 639 aa26.68■■□□□ 1.86
SFSWAP-205ENST00000537164 KDM5DQ9BY66 1539 aa26.68■■□□□ 1.86
SFSWAP-205ENST00000537164 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
SFSWAP-205ENST00000537164 KIF15Q9NS87 1388 aa26.63■■□□□ 1.85
SFSWAP-205ENST00000537164 MROH1Q8NDA8 1641 aa26.63■■□□□ 1.85
SFSWAP-205ENST00000537164 ZC3H13Q5T200 1668 aaKnown RBP26.62■■□□□ 1.85
SFSWAP-205ENST00000537164 ERBINQ96RT1 1412 aa26.62■■□□□ 1.85
SFSWAP-205ENST00000537164 ADGRL2O95490 1459 aa26.61■■□□□ 1.85
SFSWAP-205ENST00000537164 NCOA1Q15788 1441 aa26.59■■□□□ 1.85
SFSWAP-205ENST00000537164 PZPP20742 1482 aa26.59■■□□□ 1.85
SFSWAP-205ENST00000537164 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
SFSWAP-205ENST00000537164 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
SFSWAP-205ENST00000537164 ANKRD30AQ9BXX3 1397 aa26.58■■□□□ 1.85
SFSWAP-205ENST00000537164 STRCQ7RTU9 1775 aa26.58■■□□□ 1.85
SFSWAP-205ENST00000537164 MYO3AQ8NEV4 1616 aa26.58■■□□□ 1.85
SFSWAP-205ENST00000537164 ABCC3O15438 1527 aa26.56■■□□□ 1.84
SFSWAP-205ENST00000537164 RRP7BPQ9NSQ0 103 aa26.56■■□□□ 1.84
SFSWAP-205ENST00000537164 DEPDC5O75140 1603 aa26.56■■□□□ 1.84
SFSWAP-205ENST00000537164 PRDM15P57071 1507 aaPredicted RBP26.55■■□□□ 1.84
SFSWAP-205ENST00000537164 FAM50AQ14320 339 aaKnown RBP26.55■■□□□ 1.84
SFSWAP-205ENST00000537164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
SFSWAP-205ENST00000537164 CHIC2Q9UKJ5 165 aa26.52■■□□□ 1.84
SFSWAP-205ENST00000537164 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
SFSWAP-205ENST00000537164 CEP152O94986 1710 aa26.5■■□□□ 1.83
SFSWAP-205ENST00000537164 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
SFSWAP-205ENST00000537164 FBXO31Q5XUX0 539 aaPredicted RBP26.47■■□□□ 1.83
SFSWAP-205ENST00000537164 A2ML1A8K2U0 1454 aa26.46■■□□□ 1.83
SFSWAP-205ENST00000537164 TNRQ92752 1358 aa26.46■■□□□ 1.83
SFSWAP-205ENST00000537164 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
SFSWAP-205ENST00000537164 DMRT2Q9Y5R5 561 aa26.45■■□□□ 1.82
SFSWAP-205ENST00000537164 SPATA31D1Q6ZQQ2 1576 aa26.45■■□□□ 1.82
SFSWAP-205ENST00000537164 VWDEQ8N2E2 1590 aa26.45■■□□□ 1.82
SFSWAP-205ENST00000537164 PLA2R1Q13018 1463 aa26.44■■□□□ 1.82
SFSWAP-205ENST00000537164 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
SFSWAP-205ENST00000537164 ROCK1Q13464 1354 aa26.43■■□□□ 1.82
SFSWAP-205ENST00000537164 PTPRTO14522 1441 aa26.42■■□□□ 1.82
SFSWAP-205ENST00000537164 LMTK2Q8IWU2 1503 aa26.41■■□□□ 1.82
SFSWAP-205ENST00000537164 NLRP1Q9C000 1473 aa26.41■■□□□ 1.82
SFSWAP-205ENST00000537164 RRBP1Q9P2E9 1410 aaKnown RBP26.4■■□□□ 1.82
SFSWAP-205ENST00000537164 ANKRD50Q9ULJ7 1429 aa26.4■■□□□ 1.82
SFSWAP-205ENST00000537164 ERVK-7P63135 1459 aa26.39■■□□□ 1.82
SFSWAP-205ENST00000537164 KANK1Q14678 1352 aa26.38■■□□□ 1.81
SFSWAP-205ENST00000537164 CFAP65Q6ZU64 1925 aaKnown RBP26.35■■□□□ 1.81
SFSWAP-205ENST00000537164 PKD2Q13563 968 aa26.33■■□□□ 1.81
SFSWAP-205ENST00000537164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.811e-6■■■□□ 15.3
SFSWAP-205ENST00000537164 UNC13BO14795 1591 aa26.32■■□□□ 1.8
SFSWAP-205ENST00000537164 UGGT1Q9NYU2 1555 aa26.32■■□□□ 1.8
SFSWAP-205ENST00000537164 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
SFSWAP-205ENST00000537164 POLR1AO95602 1720 aaPredicted RBP26.28■■□□□ 1.8
SFSWAP-205ENST00000537164 THEMISQ8N1K5 641 aaPredicted RBP26.27■■□□□ 1.8
SFSWAP-205ENST00000537164 NCKAP5LQ9HCH0 1330 aa26.27■■□□□ 1.8
SFSWAP-205ENST00000537164 ILDR1Q86SU0 546 aaPredicted RBP26.26■■□□□ 1.79
SFSWAP-205ENST00000537164 UBR1Q8IWV7 1749 aa26.25■■□□□ 1.79
SFSWAP-205ENST00000537164 TET3O43151 1660 aa26.25■■□□□ 1.79
SFSWAP-205ENST00000537164 NEURL4Q96JN8 1562 aa26.24■■□□□ 1.79
SFSWAP-205ENST00000537164 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
SFSWAP-205ENST00000537164 ITGAEP38570 1179 aa26.23■■□□□ 1.79
SFSWAP-205ENST00000537164 GCC2Q8IWJ2 1684 aa26.22■■□□□ 1.79
SFSWAP-205ENST00000537164 NOS1P29475 1434 aa26.22■■□□□ 1.79
SFSWAP-205ENST00000537164 KDM5AP29375 1690 aaKnown RBP26.22■■□□□ 1.79
SFSWAP-205ENST00000537164 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
SFSWAP-205ENST00000537164 LTBP4Q8N2S1 1624 aa26.21■■□□□ 1.79
SFSWAP-205ENST00000537164 CERKQ8TCT0 537 aa26.2■■□□□ 1.78
SFSWAP-205ENST00000537164 FBXO41Q8TF61 875 aa26.2■■□□□ 1.78
SFSWAP-205ENST00000537164 SYNMO15061 1565 aa26.2■■□□□ 1.78
SFSWAP-205ENST00000537164 MED14O60244 1454 aa26.19■■□□□ 1.78
SFSWAP-205ENST00000537164 PIK3C2BO00750 1634 aa26.17■■□□□ 1.78
SFSWAP-205ENST00000537164 ANKLE2Q86XL3 938 aa26.17■■□□□ 1.78
SFSWAP-205ENST00000537164 SLIT1O75093 1534 aa26.14■■□□□ 1.78
SFSWAP-205ENST00000537164 ARHGAP23Q9P227 1491 aa26.14■■□□□ 1.78
SFSWAP-205ENST00000537164 E9PCH4 1651 aa26.13■■□□□ 1.77
SFSWAP-205ENST00000537164 NAIPQ13075 1403 aa26.13■■□□□ 1.77
SFSWAP-205ENST00000537164 IDI1Q13907 227 aa26.1■■□□□ 1.77
SFSWAP-205ENST00000537164 SLC52A1Q9NWF4 448 aa26.1■■□□□ 1.77
SFSWAP-205ENST00000537164 IQSEC2Q5JU85 1478 aa26.1■■□□□ 1.77
SFSWAP-205ENST00000537164 IQGAP1P46940 1657 aa26.09■■□□□ 1.77
SFSWAP-205ENST00000537164 NUP155O75694 1391 aa26.09■■□□□ 1.77
SFSWAP-205ENST00000537164 NPHP4O75161 1426 aaPredicted RBP26.09■■□□□ 1.77
SFSWAP-205ENST00000537164 HFM1A2PYH4 1435 aa26.08■■□□□ 1.77
SFSWAP-205ENST00000537164 ZNF335Q9H4Z2 1342 aaPredicted RBP26.07■■□□□ 1.76
SFSWAP-205ENST00000537164 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
SFSWAP-205ENST00000537164 ADGRB3O60242 1522 aa26.06■■□□□ 1.76
SFSWAP-205ENST00000537164 TMEM2Q9UHN6 1383 aa26.05■■□□□ 1.76
SFSWAP-205ENST00000537164 LTKP29376 864 aa26.02■■□□□ 1.76
SFSWAP-205ENST00000537164 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
SFSWAP-205ENST00000537164 STAG3Q9UJ98 1225 aa25.99■■□□□ 1.75
SFSWAP-205ENST00000537164 MYO5BQ9ULV0 1848 aa25.98■■□□□ 1.75
SFSWAP-205ENST00000537164 TXNDC2Q86VQ3 553 aa25.98■■□□□ 1.75
SFSWAP-205ENST00000537164 CPS1P31327 1500 aa25.98■■□□□ 1.75
SFSWAP-205ENST00000537164 EID1Q9Y6B2 187 aa25.97■■□□□ 1.75
SFSWAP-205ENST00000537164 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
SFSWAP-205ENST00000537164 ZFYVE9O95405 1425 aa25.92■■□□□ 1.74
SFSWAP-205ENST00000537164 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
SFSWAP-205ENST00000537164 TRPM2O94759 1503 aa25.85■■□□□ 1.73
SFSWAP-205ENST00000537164 RIMS2Q9UQ26 1411 aa25.85■■□□□ 1.73
SFSWAP-205ENST00000537164 HDGFP51858 240 aaKnown RBP25.83■■□□□ 1.73
SFSWAP-205ENST00000537164 PLEKHG1Q9ULL1 1385 aa25.82■■□□□ 1.72
SFSWAP-205ENST00000537164 TRIM52Q96A61 297 aa25.81■■□□□ 1.72
SFSWAP-205ENST00000537164 LRRC7Q96NW7 1537 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms