RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 WASHC2CQ9Y4E1 1318 aa29.21■■■□□ 2.27
COPS7A-205ENST00000536872 ADGRL2O95490 1459 aa29.2■■■□□ 2.26
COPS7A-205ENST00000536872 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.26
COPS7A-205ENST00000536872 ZMYM3Q14202 1370 aa29.18■■■□□ 2.26
COPS7A-205ENST00000536872 CLTCQ00610 1675 aaKnown RBP29.16■■■□□ 2.26
COPS7A-205ENST00000536872 ERBINQ96RT1 1412 aa29.16■■■□□ 2.26
COPS7A-205ENST00000536872 ROCK1Q13464 1354 aa29.13■■■□□ 2.25
COPS7A-205ENST00000536872 EIF2AK4Q9P2K8 1649 aaKnown RBP29.12■■■□□ 2.25
COPS7A-205ENST00000536872 ANKRD50Q9ULJ7 1429 aa29.12■■■□□ 2.25
COPS7A-205ENST00000536872 C3P01024 1663 aa29.1■■■□□ 2.25
COPS7A-205ENST00000536872 RNF17Q9BXT8 1623 aaKnown RBP29.08■■■□□ 2.25
COPS7A-205ENST00000536872 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
COPS7A-205ENST00000536872 KANK1Q14678 1352 aa29.05■■■□□ 2.24
COPS7A-205ENST00000536872 FBXO31Q5XUX0 539 aaPredicted RBP29.05■■■□□ 2.24
COPS7A-205ENST00000536872 MROH2AA6NES4 1674 aa29.04■■■□□ 2.24
COPS7A-205ENST00000536872 MROH1Q8NDA8 1641 aa29.03■■■□□ 2.24
COPS7A-205ENST00000536872 SETD1BQ9UPS6 1966 aaKnown RBP29.01■■■□□ 2.23
COPS7A-205ENST00000536872 ABCC3O15438 1527 aa29■■■□□ 2.23
COPS7A-205ENST00000536872 HSPA2P54652 639 aa28.99■■■□□ 2.23
COPS7A-205ENST00000536872 CEP152O94986 1710 aa28.97■■■□□ 2.23
COPS7A-205ENST00000536872 FAM135AQ9P2D6 1515 aa28.97■■■□□ 2.23
COPS7A-205ENST00000536872 PRDM15P57071 1507 aaPredicted RBP28.95■■■□□ 2.23
COPS7A-205ENST00000536872 CFAP65Q6ZU64 1925 aaKnown RBP28.95■■■□□ 2.23
COPS7A-205ENST00000536872 NPATQ14207 1427 aa28.94■■■□□ 2.22
COPS7A-205ENST00000536872 DEPDC5O75140 1603 aa28.94■■■□□ 2.22
COPS7A-205ENST00000536872 UHRF1BP1Q6BDS2 1440 aa28.94■■■□□ 2.22
COPS7A-205ENST00000536872 LMTK3Q96Q04 1460 aa28.93■■■□□ 2.22
COPS7A-205ENST00000536872 NAIPQ13075 1403 aa28.93■■■□□ 2.22
COPS7A-205ENST00000536872 PZPP20742 1482 aa28.92■■■□□ 2.22
COPS7A-205ENST00000536872 ZC3H13Q5T200 1668 aaKnown RBP28.91■■■□□ 2.22
COPS7A-205ENST00000536872 NUP155O75694 1391 aa28.9■■■□□ 2.22
COPS7A-205ENST00000536872 PREX1Q8TCU6 1659 aa28.89■■■□□ 2.22
COPS7A-205ENST00000536872 TNRQ92752 1358 aa28.89■■■□□ 2.22
COPS7A-205ENST00000536872 CAMSAP1Q5T5Y3 1602 aa28.88■■■□□ 2.21
COPS7A-205ENST00000536872 HFM1A2PYH4 1435 aa28.87■■■□□ 2.21
COPS7A-205ENST00000536872 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
COPS7A-205ENST00000536872 VWDEQ8N2E2 1590 aa28.85■■■□□ 2.21
COPS7A-205ENST00000536872 UNC13BO14795 1591 aa28.83■■■□□ 2.21
COPS7A-205ENST00000536872 GCC2Q8IWJ2 1684 aa28.82■■■□□ 2.2
COPS7A-205ENST00000536872 LMTK2Q8IWU2 1503 aa28.81■■■□□ 2.2
COPS7A-205ENST00000536872 ARHGAP31Q2M1Z3 1444 aa28.81■■■□□ 2.2
COPS7A-205ENST00000536872 ERVK-7P63135 1459 aa28.8■■■□□ 2.2
COPS7A-205ENST00000536872 MYO3AQ8NEV4 1616 aa28.76■■■□□ 2.2
COPS7A-205ENST00000536872 EFCAB6Q5THR3 1501 aa28.74■■■□□ 2.19
COPS7A-205ENST00000536872 SPATA31D1Q6ZQQ2 1576 aa28.74■■■□□ 2.19
COPS7A-205ENST00000536872 SETD5Q9C0A6 1442 aa28.73■■■□□ 2.19
COPS7A-205ENST00000536872 IQGAP3Q86VI3 1631 aa28.72■■■□□ 2.19
COPS7A-205ENST00000536872 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
COPS7A-205ENST00000536872 CEP170BQ9Y4F5 1589 aaPredicted RBP28.72■■■□□ 2.19
COPS7A-205ENST00000536872 TET3O43151 1660 aa28.72■■■□□ 2.19
COPS7A-205ENST00000536872 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
COPS7A-205ENST00000536872 NLRP1Q9C000 1473 aa28.69■■■□□ 2.18
COPS7A-205ENST00000536872 IDI1Q13907 227 aa28.68■■■□□ 2.18
COPS7A-205ENST00000536872 SLC4A1APQ9BWU0 796 aaKnown RBP28.68■■■□□ 2.18
COPS7A-205ENST00000536872 THEMISQ8N1K5 641 aaPredicted RBP28.67■■■□□ 2.18
COPS7A-205ENST00000536872 NCKAP5LQ9HCH0 1330 aa28.67■■■□□ 2.18
COPS7A-205ENST00000536872 ZNF142P52746 1687 aaPredicted RBP28.65■■■□□ 2.18
COPS7A-205ENST00000536872 PKD2Q13563 968 aa28.65■■■□□ 2.18
COPS7A-205ENST00000536872 RPRD2Q5VT52 1461 aaKnown RBP28.65■■■□□ 2.18
COPS7A-205ENST00000536872 E9PCH4 1651 aa28.64■■■□□ 2.18
COPS7A-205ENST00000536872 NOS1P29475 1434 aa28.64■■■□□ 2.18
COPS7A-205ENST00000536872 RAB3GAP2Q9H2M9 1393 aa28.63■■■□□ 2.17
COPS7A-205ENST00000536872 UGGT1Q9NYU2 1555 aa28.62■■■□□ 2.17
COPS7A-205ENST00000536872 CHGAP10645 457 aaKnown RBP28.61■■■□□ 2.17
COPS7A-205ENST00000536872 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
COPS7A-205ENST00000536872 SYNMO15061 1565 aa28.61■■■□□ 2.17
COPS7A-205ENST00000536872 FOXD1Q16676 465 aa28.58■■■□□ 2.17
COPS7A-205ENST00000536872 MPHOSPH9Q99550 1183 aa28.58■■■□□ 2.17
COPS7A-205ENST00000536872 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.17
COPS7A-205ENST00000536872 STRCQ7RTU9 1775 aa28.57■■■□□ 2.16
COPS7A-205ENST00000536872 ANKLE2Q86XL3 938 aa28.57■■■□□ 2.16
COPS7A-205ENST00000536872 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
COPS7A-205ENST00000536872 PLA2R1Q13018 1463 aa28.53■■■□□ 2.16
COPS7A-205ENST00000536872 ACIN1Q9UKV3 1341 aaKnown RBP28.52■■■□□ 2.16
COPS7A-205ENST00000536872 TRIM26Q12899 539 aaPredicted RBP28.51■■■□□ 2.15
COPS7A-205ENST00000536872 UBR1Q8IWV7 1749 aa28.5■■■□□ 2.15
COPS7A-205ENST00000536872 TXNDC2Q86VQ3 553 aa28.5■■■□□ 2.15
COPS7A-205ENST00000536872 PTPRTO14522 1441 aa28.47■■■□□ 2.15
COPS7A-205ENST00000536872 EID1Q9Y6B2 187 aa28.47■■■□□ 2.15
COPS7A-205ENST00000536872 LTKP29376 864 aa28.46■■■□□ 2.15
COPS7A-205ENST00000536872 HRCP23327 699 aa28.45■■■□□ 2.14
COPS7A-205ENST00000536872 SPHKAPQ2M3C7 1700 aa28.45■■■□□ 2.14
COPS7A-205ENST00000536872 SENP3Q9H4L4 574 aaPredicted RBP28.44■■■□□ 2.14
COPS7A-205ENST00000536872 TMEM2Q9UHN6 1383 aa28.44■■■□□ 2.14
COPS7A-205ENST00000536872 ADGRB3O60242 1522 aa28.43■■■□□ 2.14
COPS7A-205ENST00000536872 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
COPS7A-205ENST00000536872 NUTM2DQ5VT03 806 aaPredicted RBP28.4■■■□□ 2.14
COPS7A-205ENST00000536872 BCANQ96GW7 911 aa28.39■■■□□ 2.14
COPS7A-205ENST00000536872 NPHP4O75161 1426 aaPredicted RBP28.38■■■□□ 2.13
COPS7A-205ENST00000536872 MYO5BQ9ULV0 1848 aa28.38■■■□□ 2.13
COPS7A-205ENST00000536872 POLR1AO95602 1720 aaPredicted RBP28.38■■■□□ 2.13
COPS7A-205ENST00000536872 PPP1R15AO75807 674 aaPredicted RBP28.37■■■□□ 2.13
COPS7A-205ENST00000536872 SCAF11Q99590 1463 aaKnown RBP28.37■■■□□ 2.13
COPS7A-205ENST00000536872 ARHGAP23Q9P227 1491 aa28.37■■■□□ 2.13
COPS7A-205ENST00000536872 SLIT1O75093 1534 aa28.37■■■□□ 2.13
COPS7A-205ENST00000536872 TRPM2O94759 1503 aa28.37■■■□□ 2.13
COPS7A-205ENST00000536872 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
COPS7A-205ENST00000536872 HDGFP51858 240 aaKnown RBP28.36■■■□□ 2.13
COPS7A-205ENST00000536872 NEURL4Q96JN8 1562 aa28.35■■■□□ 2.13
COPS7A-205ENST00000536872 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms