RNA–Protein interactions for RNA: ENST00000536566.5

RAB6A-204, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB6A, Length 1,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-204ENST00000536566 GGT6Q6P531 493 aa33.39■■■□□ 2.94
RAB6A-204ENST00000536566 ESF1Q9H501 851 aaKnown RBP33.39■■■□□ 2.94
RAB6A-204ENST00000536566 RNF17Q9BXT8 1623 aaKnown RBP33.38■■■□□ 2.93
RAB6A-204ENST00000536566 ITGAEP38570 1179 aa33.33■■■□□ 2.93
RAB6A-204ENST00000536566 ANKRD50Q9ULJ7 1429 aa33.32■■■□□ 2.92
RAB6A-204ENST00000536566 MROH2AA6NES4 1674 aa33.31■■■□□ 2.92
RAB6A-204ENST00000536566 KDM5DQ9BY66 1539 aa33.28■■■□□ 2.92
RAB6A-204ENST00000536566 MROH1Q8NDA8 1641 aa33.27■■■□□ 2.92
RAB6A-204ENST00000536566 DEPDC5O75140 1603 aa33.26■■■□□ 2.91
RAB6A-204ENST00000536566 PRDM15P57071 1507 aaPredicted RBP33.26■■■□□ 2.91
RAB6A-204ENST00000536566 ZMYM3Q14202 1370 aa33.24■■■□□ 2.91
RAB6A-204ENST00000536566 WASHC2CQ9Y4E1 1318 aa33.24■■■□□ 2.91
RAB6A-204ENST00000536566 CLTCQ00610 1675 aaKnown RBP33.23■■■□□ 2.91
RAB6A-204ENST00000536566 ZC3H13Q5T200 1668 aaKnown RBP33.21■■■□□ 2.91
RAB6A-204ENST00000536566 C3P01024 1663 aa33.2■■■□□ 2.9
RAB6A-204ENST00000536566 ABCC3O15438 1527 aa33.18■■■□□ 2.9
RAB6A-204ENST00000536566 CEBPAP49715 358 aaPredicted RBP33.17■■■□□ 2.9
RAB6A-204ENST00000536566 KANK1Q14678 1352 aa33.17■■■□□ 2.9
RAB6A-204ENST00000536566 HFM1A2PYH4 1435 aa33.17■■■□□ 2.9
RAB6A-204ENST00000536566 NPATQ14207 1427 aa33.17■■■□□ 2.9
RAB6A-204ENST00000536566 NAIPQ13075 1403 aa33.15■■■□□ 2.9
RAB6A-204ENST00000536566 VWDEQ8N2E2 1590 aa33.15■■■□□ 2.9
RAB6A-204ENST00000536566 LMTK2Q8IWU2 1503 aa33.12■■■□□ 2.89
RAB6A-204ENST00000536566 PZPP20742 1482 aa33.11■■■□□ 2.89
RAB6A-204ENST00000536566 UNC13BO14795 1591 aa33.1■■■□□ 2.89
RAB6A-204ENST00000536566 GCC2Q8IWJ2 1684 aa33.1■■■□□ 2.89
RAB6A-204ENST00000536566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.08■■■□□ 2.89
RAB6A-204ENST00000536566 ARHGAP31Q2M1Z3 1444 aa33.08■■■□□ 2.89
RAB6A-204ENST00000536566 PLPPR3Q6T4P5 718 aa33.07■■■□□ 2.88
RAB6A-204ENST00000536566 SETD1BQ9UPS6 1966 aaKnown RBP33.06■■■□□ 2.88
RAB6A-204ENST00000536566 CAMSAP1Q5T5Y3 1602 aa33.03■■■□□ 2.88
RAB6A-204ENST00000536566 CEP152O94986 1710 aa33.03■■■□□ 2.88
RAB6A-204ENST00000536566 PREX1Q8TCU6 1659 aa33.01■■■□□ 2.87
RAB6A-204ENST00000536566 LMTK3Q96Q04 1460 aa33■■■□□ 2.87
RAB6A-204ENST00000536566 UHRF1BP1Q6BDS2 1440 aa32.99■■■□□ 2.87
RAB6A-204ENST00000536566 IQGAP3Q86VI3 1631 aa32.96■■■□□ 2.87
RAB6A-204ENST00000536566 EFCAB6Q5THR3 1501 aa32.96■■■□□ 2.87
RAB6A-204ENST00000536566 NUP155O75694 1391 aa32.96■■■□□ 2.87
RAB6A-204ENST00000536566 FBXO31Q5XUX0 539 aaPredicted RBP32.95■■■□□ 2.87
RAB6A-204ENST00000536566 SPATA31D1Q6ZQQ2 1576 aa32.95■■■□□ 2.86
RAB6A-204ENST00000536566 ACIN1Q9UKV3 1341 aaKnown RBP32.94■■■□□ 2.86
RAB6A-204ENST00000536566 RPRD2Q5VT52 1461 aaKnown RBP32.93■■■□□ 2.86
RAB6A-204ENST00000536566 TNRQ92752 1358 aa32.93■■■□□ 2.86
RAB6A-204ENST00000536566 ERVK-7P63135 1459 aa32.93■■■□□ 2.86
RAB6A-204ENST00000536566 TET3O43151 1660 aa32.92■■■□□ 2.86
RAB6A-204ENST00000536566 NLRP1Q9C000 1473 aa32.87■■■□□ 2.85
RAB6A-204ENST00000536566 SETD5Q9C0A6 1442 aa32.87■■■□□ 2.85
RAB6A-204ENST00000536566 MYO3AQ8NEV4 1616 aa32.87■■■□□ 2.85
RAB6A-204ENST00000536566 ZNF142P52746 1687 aaPredicted RBP32.85■■■□□ 2.85
RAB6A-204ENST00000536566 A2ML1A8K2U0 1454 aa32.83■■■□□ 2.85
RAB6A-204ENST00000536566 NOS1P29475 1434 aa32.83■■■□□ 2.85
RAB6A-204ENST00000536566 CEP170BQ9Y4F5 1589 aaPredicted RBP32.82■■■□□ 2.84
RAB6A-204ENST00000536566 HRCP23327 699 aa32.76■■■□□ 2.83
RAB6A-204ENST00000536566 TRIM52Q96A61 297 aa32.76■■■□□ 2.83
RAB6A-204ENST00000536566 E9PCH4 1651 aa32.75■■■□□ 2.83
RAB6A-204ENST00000536566 HSPA2P54652 639 aa32.75■■■□□ 2.83
RAB6A-204ENST00000536566 RAB3GAP2Q9H2M9 1393 aa32.74■■■□□ 2.83
RAB6A-204ENST00000536566 SLC52A1Q9NWF4 448 aa32.72■■■□□ 2.83
RAB6A-204ENST00000536566 SYNMO15061 1565 aa32.71■■■□□ 2.83
RAB6A-204ENST00000536566 CFAP65Q6ZU64 1925 aaKnown RBP32.69■■■□□ 2.82
RAB6A-204ENST00000536566 PLA2R1Q13018 1463 aa32.69■■■□□ 2.82
RAB6A-204ENST00000536566 UGGT1Q9NYU2 1555 aa32.69■■■□□ 2.82
RAB6A-204ENST00000536566 THEMISQ8N1K5 641 aaPredicted RBP32.67■■■□□ 2.82
RAB6A-204ENST00000536566 SLC4A1APQ9BWU0 796 aaKnown RBP32.67■■■□□ 2.82
RAB6A-204ENST00000536566 PTPRTO14522 1441 aa32.67■■■□□ 2.82
RAB6A-204ENST00000536566 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
RAB6A-204ENST00000536566 KDM5AP29375 1690 aaKnown RBP32.63■■■□□ 2.81
RAB6A-204ENST00000536566 IDI1Q13907 227 aa32.63■■■□□ 2.81
RAB6A-204ENST00000536566 PKD2Q13563 968 aa32.62■■■□□ 2.81
RAB6A-204ENST00000536566 PIK3C2BO00750 1634 aa32.61■■■□□ 2.81
RAB6A-204ENST00000536566 MPHOSPH9Q99550 1183 aa32.6■■■□□ 2.81
RAB6A-204ENST00000536566 UBR1Q8IWV7 1749 aa32.59■■■□□ 2.81
RAB6A-204ENST00000536566 SPHKAPQ2M3C7 1700 aa32.57■■■□□ 2.8
RAB6A-204ENST00000536566 DMRT2Q9Y5R5 561 aa32.56■■■□□ 2.8
RAB6A-204ENST00000536566 TRPM2O94759 1503 aa32.56■■■□□ 2.8
RAB6A-204ENST00000536566 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
RAB6A-204ENST00000536566 STRCQ7RTU9 1775 aa32.55■■■□□ 2.8
RAB6A-204ENST00000536566 SLIT1O75093 1534 aa32.52■■■□□ 2.8
RAB6A-204ENST00000536566 STAG3Q9UJ98 1225 aa32.52■■■□□ 2.8
RAB6A-204ENST00000536566 ARHGAP23Q9P227 1491 aa32.52■■■□□ 2.8
RAB6A-204ENST00000536566 ANKLE2Q86XL3 938 aa32.49■■■□□ 2.79
RAB6A-204ENST00000536566 TMEM2Q9UHN6 1383 aa32.48■■■□□ 2.79
RAB6A-204ENST00000536566 TMEM131LA2VDJ0 1609 aa32.46■■■□□ 2.79
RAB6A-204ENST00000536566 NCKAP5LQ9HCH0 1330 aa32.45■■■□□ 2.78
RAB6A-204ENST00000536566 MED14O60244 1454 aa32.44■■■□□ 2.78
RAB6A-204ENST00000536566 POLR1AO95602 1720 aaPredicted RBP32.42■■■□□ 2.78
RAB6A-204ENST00000536566 CLTCL1P53675 1640 aa32.4■■■□□ 2.78
RAB6A-204ENST00000536566 FOXD1Q16676 465 aa32.4■■■□□ 2.78
RAB6A-204ENST00000536566 EID1Q9Y6B2 187 aa32.4■■■□□ 2.78
RAB6A-204ENST00000536566 SCAF11Q99590 1463 aaKnown RBP32.4■■■□□ 2.78
RAB6A-204ENST00000536566 NEURL4Q96JN8 1562 aa32.4■■■□□ 2.78
RAB6A-204ENST00000536566 HDGFP51858 240 aaKnown RBP32.36■■■□□ 2.77
RAB6A-204ENST00000536566 TXNDC2Q86VQ3 553 aa32.36■■■□□ 2.77
RAB6A-204ENST00000536566 CCDC144AA2RUR9 1427 aa32.35■■■□□ 2.77
RAB6A-204ENST00000536566 ZFYVE9O95405 1425 aa32.35■■■□□ 2.77
RAB6A-204ENST00000536566 LTKP29376 864 aa32.35■■■□□ 2.77
RAB6A-204ENST00000536566 NPHP4O75161 1426 aaPredicted RBP32.34■■■□□ 2.77
RAB6A-204ENST00000536566 CHGAP10645 457 aaKnown RBP32.34■■■□□ 2.77
RAB6A-204ENST00000536566 RIMS2Q9UQ26 1411 aa32.32■■■□□ 2.76
RAB6A-204ENST00000536566 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms