RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
RTN3P1-201ENST00000536295 FBXO31Q5XUX0 539 aaPredicted RBP22.27■■□□□ 1.16
RTN3P1-201ENST00000536295 FGD6Q6ZV73 1430 aa22.27■■□□□ 1.16
RTN3P1-201ENST00000536295 CERKQ8TCT0 537 aa22.26■■□□□ 1.15
RTN3P1-201ENST00000536295 CEP170BQ9Y4F5 1589 aaPredicted RBP22.25■■□□□ 1.15
RTN3P1-201ENST00000536295 ABCC5O15440 1437 aa22.25■■□□□ 1.15
RTN3P1-201ENST00000536295 FAM135AQ9P2D6 1515 aa22.25■■□□□ 1.15
RTN3P1-201ENST00000536295 PTPRTO14522 1441 aa22.24■■□□□ 1.15
RTN3P1-201ENST00000536295 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
RTN3P1-201ENST00000536295 NCKAP5LQ9HCH0 1330 aa22.23■■□□□ 1.15
RTN3P1-201ENST00000536295 PZPP20742 1482 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 TNRQ92752 1358 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 DAPK1P53355 1430 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
RTN3P1-201ENST00000536295 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
RTN3P1-201ENST00000536295 RNF17Q9BXT8 1623 aaKnown RBP22.21■■□□□ 1.15
RTN3P1-201ENST00000536295 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
RTN3P1-201ENST00000536295 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.15
RTN3P1-201ENST00000536295 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
RTN3P1-201ENST00000536295 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
RTN3P1-201ENST00000536295 A2ML1A8K2U0 1454 aa22.19■■□□□ 1.14
RTN3P1-201ENST00000536295 ABCC3O15438 1527 aa22.17■■□□□ 1.14
RTN3P1-201ENST00000536295 PLA2R1Q13018 1463 aa22.16■■□□□ 1.14
RTN3P1-201ENST00000536295 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
RTN3P1-201ENST00000536295 MROH1Q8NDA8 1641 aa22.16■■□□□ 1.14
RTN3P1-201ENST00000536295 ZC3H13Q5T200 1668 aaKnown RBP22.14■■□□□ 1.14
RTN3P1-201ENST00000536295 PKD2Q13563 968 aa22.14■■□□□ 1.13
RTN3P1-201ENST00000536295 ERBINQ96RT1 1412 aa22.14■■□□□ 1.13
RTN3P1-201ENST00000536295 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
RTN3P1-201ENST00000536295 CEP152O94986 1710 aa22.12■■□□□ 1.13
RTN3P1-201ENST00000536295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.12■■□□□ 1.13
RTN3P1-201ENST00000536295 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
RTN3P1-201ENST00000536295 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
RTN3P1-201ENST00000536295 LTBP4Q8N2S1 1624 aa22.08■■□□□ 1.13
RTN3P1-201ENST00000536295 ZNF335Q9H4Z2 1342 aaPredicted RBP22.07■■□□□ 1.12
RTN3P1-201ENST00000536295 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
RTN3P1-201ENST00000536295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
RTN3P1-201ENST00000536295 ERVK-7P63135 1459 aa22.07■■□□□ 1.12
RTN3P1-201ENST00000536295 SPATA31D1Q6ZQQ2 1576 aa22.07■■□□□ 1.12
RTN3P1-201ENST00000536295 UGGT1Q9NYU2 1555 aa22.06■■□□□ 1.12
RTN3P1-201ENST00000536295 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
RTN3P1-201ENST00000536295 KANK1Q14678 1352 aa22.04■■□□□ 1.12
RTN3P1-201ENST00000536295 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
RTN3P1-201ENST00000536295 DEPDC5O75140 1603 aa22.02■■□□□ 1.12
RTN3P1-201ENST00000536295 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.12
RTN3P1-201ENST00000536295 ANKLE2Q86XL3 938 aa22.02■■□□□ 1.12
RTN3P1-201ENST00000536295 POLR1AO95602 1720 aaPredicted RBP22.02■■□□□ 1.12
RTN3P1-201ENST00000536295 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
RTN3P1-201ENST00000536295 ARHGAP31Q2M1Z3 1444 aa21.99■■□□□ 1.11
RTN3P1-201ENST00000536295 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
RTN3P1-201ENST00000536295 ITGAEP38570 1179 aa21.95■■□□□ 1.1
RTN3P1-201ENST00000536295 IQSEC2Q5JU85 1478 aa21.95■■□□□ 1.1
RTN3P1-201ENST00000536295 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
RTN3P1-201ENST00000536295 LMTK2Q8IWU2 1503 aa21.94■■□□□ 1.1
RTN3P1-201ENST00000536295 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
RTN3P1-201ENST00000536295 UBR1Q8IWV7 1749 aa21.92■■□□□ 1.1
RTN3P1-201ENST00000536295 MED14O60244 1454 aa21.9■■□□□ 1.1
RTN3P1-201ENST00000536295 STAG3Q9UJ98 1225 aa21.89■■□□□ 1.09
RTN3P1-201ENST00000536295 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.09
RTN3P1-201ENST00000536295 IQGAP1P46940 1657 aa21.88■■□□□ 1.09
RTN3P1-201ENST00000536295 PIK3C2BO00750 1634 aa21.88■■□□□ 1.09
RTN3P1-201ENST00000536295 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
RTN3P1-201ENST00000536295 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
RTN3P1-201ENST00000536295 IDI1Q13907 227 aa21.86■■□□□ 1.09
RTN3P1-201ENST00000536295 SCAF11Q99590 1463 aaKnown RBP21.85■■□□□ 1.09
RTN3P1-201ENST00000536295 TXNDC2Q86VQ3 553 aa21.85■■□□□ 1.09
RTN3P1-201ENST00000536295 SYNMO15061 1565 aa21.85■■□□□ 1.09
RTN3P1-201ENST00000536295 CPS1P31327 1500 aa21.85■■□□□ 1.09
RTN3P1-201ENST00000536295 LTKP29376 864 aa21.84■■□□□ 1.09
RTN3P1-201ENST00000536295 NOS1P29475 1434 aa21.83■■□□□ 1.09
RTN3P1-201ENST00000536295 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
RTN3P1-201ENST00000536295 SLIT1O75093 1534 aa21.83■■□□□ 1.09
RTN3P1-201ENST00000536295 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
RTN3P1-201ENST00000536295 UNC13BO14795 1591 aa21.81■■□□□ 1.08
RTN3P1-201ENST00000536295 TET3O43151 1660 aa21.8■■□□□ 1.08
RTN3P1-201ENST00000536295 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
RTN3P1-201ENST00000536295 RPRD2Q5VT52 1461 aaKnown RBP21.79■■□□□ 1.08
RTN3P1-201ENST00000536295 SLC52A1Q9NWF4 448 aa21.78■■□□□ 1.08
RTN3P1-201ENST00000536295 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.07
RTN3P1-201ENST00000536295 ADGRB3O60242 1522 aa21.76■■□□□ 1.07
RTN3P1-201ENST00000536295 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
RTN3P1-201ENST00000536295 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
RTN3P1-201ENST00000536295 NUP155O75694 1391 aa21.75■■□□□ 1.07
RTN3P1-201ENST00000536295 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
RTN3P1-201ENST00000536295 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
RTN3P1-201ENST00000536295 PIP4K2BP78356 416 aa21.74■■□□□ 1.07
RTN3P1-201ENST00000536295 TOM1O60784 492 aa21.73■■□□□ 1.07
RTN3P1-201ENST00000536295 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
RTN3P1-201ENST00000536295 E9PCH4 1651 aa21.72■■□□□ 1.07
RTN3P1-201ENST00000536295 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
RTN3P1-201ENST00000536295 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
RTN3P1-201ENST00000536295 CHGAP10645 457 aaKnown RBP21.7■■□□□ 1.06
RTN3P1-201ENST00000536295 BCANQ96GW7 911 aa21.69■■□□□ 1.06
RTN3P1-201ENST00000536295 SLC26A8Q96RN1 970 aa21.68■■□□□ 1.06
RTN3P1-201ENST00000536295 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
RTN3P1-201ENST00000536295 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
RTN3P1-201ENST00000536295 PPP1R15AO75807 674 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms