RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
CDCA3-206ENST00000536241 ARHGEF40Q8TER5 1519 aa16.99■□□□□ 0.31
CDCA3-206ENST00000536241 MLECQ14165 292 aa16.99■□□□□ 0.31
CDCA3-206ENST00000536241 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
CDCA3-206ENST00000536241 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.31
CDCA3-206ENST00000536241 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
CDCA3-206ENST00000536241 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
CDCA3-206ENST00000536241 AGLP35573 1532 aa16.95■□□□□ 0.3
CDCA3-206ENST00000536241 KANK1Q14678 1352 aa16.94■□□□□ 0.3
CDCA3-206ENST00000536241 FOXD1Q16676 465 aa16.94■□□□□ 0.3
CDCA3-206ENST00000536241 PZPP20742 1482 aa16.94■□□□□ 0.3
CDCA3-206ENST00000536241 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
CDCA3-206ENST00000536241 UNC13BO14795 1591 aa16.93■□□□□ 0.3
CDCA3-206ENST00000536241 PKD2Q13563 968 aa16.93■□□□□ 0.3
CDCA3-206ENST00000536241 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
CDCA3-206ENST00000536241 DEPDC5O75140 1603 aa16.91■□□□□ 0.3
CDCA3-206ENST00000536241 FAM135AQ9P2D6 1515 aa16.9■□□□□ 0.3
CDCA3-206ENST00000536241 MROH1Q8NDA8 1641 aa16.9■□□□□ 0.3
CDCA3-206ENST00000536241 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
CDCA3-206ENST00000536241 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
CDCA3-206ENST00000536241 RNF17Q9BXT8 1623 aaKnown RBP16.89■□□□□ 0.3
CDCA3-206ENST00000536241 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-206ENST00000536241 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
CDCA3-206ENST00000536241 VWDEQ8N2E2 1590 aa16.87■□□□□ 0.29
CDCA3-206ENST00000536241 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
CDCA3-206ENST00000536241 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
CDCA3-206ENST00000536241 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
CDCA3-206ENST00000536241 ABCC3O15438 1527 aa16.82■□□□□ 0.28
CDCA3-206ENST00000536241 CEP152O94986 1710 aa16.82■□□□□ 0.28
CDCA3-206ENST00000536241 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
CDCA3-206ENST00000536241 LMTK2Q8IWU2 1503 aa16.82■□□□□ 0.28
CDCA3-206ENST00000536241 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
CDCA3-206ENST00000536241 TET3O43151 1660 aa16.8■□□□□ 0.28
CDCA3-206ENST00000536241 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
CDCA3-206ENST00000536241 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
CDCA3-206ENST00000536241 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-206ENST00000536241 E9PCH4 1651 aa16.79■□□□□ 0.28
CDCA3-206ENST00000536241 NPATQ14207 1427 aa16.78■□□□□ 0.28
CDCA3-206ENST00000536241 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
CDCA3-206ENST00000536241 CEBPAP49715 358 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-206ENST00000536241 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
CDCA3-206ENST00000536241 PLA2R1Q13018 1463 aa16.76■□□□□ 0.27
CDCA3-206ENST00000536241 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
CDCA3-206ENST00000536241 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
CDCA3-206ENST00000536241 CAMSAP1Q5T5Y3 1602 aa16.75■□□□□ 0.27
CDCA3-206ENST00000536241 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
CDCA3-206ENST00000536241 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
CDCA3-206ENST00000536241 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
CDCA3-206ENST00000536241 PTPRTO14522 1441 aa16.73■□□□□ 0.27
CDCA3-206ENST00000536241 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.26
CDCA3-206ENST00000536241 FER1L4A9Z1Z3 1794 aa16.7■□□□□ 0.26
CDCA3-206ENST00000536241 NOS1P29475 1434 aa16.7■□□□□ 0.26
CDCA3-206ENST00000536241 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
CDCA3-206ENST00000536241 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
CDCA3-206ENST00000536241 IDI1Q13907 227 aa16.68■□□□□ 0.26
CDCA3-206ENST00000536241 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
CDCA3-206ENST00000536241 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
CDCA3-206ENST00000536241 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
CDCA3-206ENST00000536241 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
CDCA3-206ENST00000536241 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
CDCA3-206ENST00000536241 ERVK-7P63135 1459 aa16.66■□□□□ 0.26
CDCA3-206ENST00000536241 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
CDCA3-206ENST00000536241 TRPM2O94759 1503 aa16.66■□□□□ 0.26
CDCA3-206ENST00000536241 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
CDCA3-206ENST00000536241 RIMS1Q86UR5 1692 aaKnown RBP16.65■□□□□ 0.26
CDCA3-206ENST00000536241 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
CDCA3-206ENST00000536241 C3P01024 1663 aa16.64■□□□□ 0.25
CDCA3-206ENST00000536241 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
CDCA3-206ENST00000536241 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
CDCA3-206ENST00000536241 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
CDCA3-206ENST00000536241 SYNMO15061 1565 aa16.63■□□□□ 0.25
CDCA3-206ENST00000536241 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
CDCA3-206ENST00000536241 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
CDCA3-206ENST00000536241 TNRQ92752 1358 aa16.62■□□□□ 0.25
CDCA3-206ENST00000536241 CLTCL1P53675 1640 aa16.62■□□□□ 0.25
CDCA3-206ENST00000536241 PTPRMP28827 1452 aa16.6■□□□□ 0.25
CDCA3-206ENST00000536241 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
CDCA3-206ENST00000536241 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
CDCA3-206ENST00000536241 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
CDCA3-206ENST00000536241 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
CDCA3-206ENST00000536241 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
CDCA3-206ENST00000536241 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
CDCA3-206ENST00000536241 PIK3C2BO00750 1634 aa16.56■□□□□ 0.24
CDCA3-206ENST00000536241 KIF1BO60333 1816 aa16.56■□□□□ 0.24
CDCA3-206ENST00000536241 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
CDCA3-206ENST00000536241 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-206ENST00000536241 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
CDCA3-206ENST00000536241 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
CDCA3-206ENST00000536241 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
CDCA3-206ENST00000536241 TMEM131LA2VDJ0 1609 aa16.51■□□□□ 0.23
CDCA3-206ENST00000536241 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
CDCA3-206ENST00000536241 A2ML1A8K2U0 1454 aa16.5■□□□□ 0.23
CDCA3-206ENST00000536241 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-206ENST00000536241 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
CDCA3-206ENST00000536241 NEURL4Q96JN8 1562 aa16.49■□□□□ 0.23
CDCA3-206ENST00000536241 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
CDCA3-206ENST00000536241 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
CDCA3-206ENST00000536241 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
CDCA3-206ENST00000536241 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
CDCA3-206ENST00000536241 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms