RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
CACNB3-202ENST00000536187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.52■■□□□ 1.84
CACNB3-202ENST00000536187 NUP155O75694 1391 aa26.51■■□□□ 1.83
CACNB3-202ENST00000536187 CCER1Q8TC90 406 aaPredicted RBP26.51■■□□□ 1.83
CACNB3-202ENST00000536187 BCORL1Q5H9F3 1711 aa26.5■■□□□ 1.83
CACNB3-202ENST00000536187 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
CACNB3-202ENST00000536187 KDM5DQ9BY66 1539 aa26.5■■□□□ 1.83
CACNB3-202ENST00000536187 RNF17Q9BXT8 1623 aaKnown RBP26.49■■□□□ 1.83
CACNB3-202ENST00000536187 PRDM15P57071 1507 aaPredicted RBP26.47■■□□□ 1.83
CACNB3-202ENST00000536187 FOXD1Q16676 465 aa26.47■■□□□ 1.83
CACNB3-202ENST00000536187 MPHOSPH9Q99550 1183 aa26.47■■□□□ 1.83
CACNB3-202ENST00000536187 FAM135AQ9P2D6 1515 aa26.46■■□□□ 1.83
CACNB3-202ENST00000536187 IQGAP3Q86VI3 1631 aa26.46■■□□□ 1.83
CACNB3-202ENST00000536187 VWDEQ8N2E2 1590 aa26.43■■□□□ 1.82
CACNB3-202ENST00000536187 GGT6Q6P531 493 aa26.43■■□□□ 1.82
CACNB3-202ENST00000536187 SLC4A1APQ9BWU0 796 aaKnown RBP26.42■■□□□ 1.82
CACNB3-202ENST00000536187 AGLP35573 1532 aa26.41■■□□□ 1.82
CACNB3-202ENST00000536187 CEP152O94986 1710 aa26.41■■□□□ 1.82
CACNB3-202ENST00000536187 PKD2Q13563 968 aa26.36■■□□□ 1.81
CACNB3-202ENST00000536187 MLECQ14165 292 aa26.36■■□□□ 1.81
CACNB3-202ENST00000536187 ABCC3O15438 1527 aa26.33■■□□□ 1.81
CACNB3-202ENST00000536187 E9PCH4 1651 aa26.33■■□□□ 1.8
CACNB3-202ENST00000536187 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
CACNB3-202ENST00000536187 TET3O43151 1660 aa26.31■■□□□ 1.8
CACNB3-202ENST00000536187 KANK1Q14678 1352 aa26.3■■□□□ 1.8
CACNB3-202ENST00000536187 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
CACNB3-202ENST00000536187 SIN3AQ96ST3 1273 aa26.3■■□□□ 1.8
CACNB3-202ENST00000536187 LMTK2Q8IWU2 1503 aa26.28■■□□□ 1.8
CACNB3-202ENST00000536187 EFCAB6Q5THR3 1501 aa26.28■■□□□ 1.8
CACNB3-202ENST00000536187 CAMSAP1Q5T5Y3 1602 aa26.27■■□□□ 1.8
CACNB3-202ENST00000536187 WASHC2CQ9Y4E1 1318 aa26.27■■□□□ 1.8
CACNB3-202ENST00000536187 ANKRD30BQ9BXX2 1392 aa26.26■■□□□ 1.79
CACNB3-202ENST00000536187 CLTCQ00610 1675 aaKnown RBP26.25■■□□□ 1.79
CACNB3-202ENST00000536187 PLA2R1Q13018 1463 aa26.25■■□□□ 1.79
CACNB3-202ENST00000536187 ZC3H13Q5T200 1668 aaKnown RBP26.24■■□□□ 1.79
CACNB3-202ENST00000536187 NPATQ14207 1427 aa26.22■■□□□ 1.79
CACNB3-202ENST00000536187 CFAP65Q6ZU64 1925 aaKnown RBP26.21■■□□□ 1.79
CACNB3-202ENST00000536187 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
CACNB3-202ENST00000536187 NEUROD1Q13562 356 aa26.19■■□□□ 1.78
CACNB3-202ENST00000536187 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
CACNB3-202ENST00000536187 UGGT1Q9NYU2 1555 aa26.14■■□□□ 1.78
CACNB3-202ENST00000536187 FER1L4A9Z1Z3 1794 aa26.13■■□□□ 1.77
CACNB3-202ENST00000536187 PTPRTO14522 1441 aa26.12■■□□□ 1.77
CACNB3-202ENST00000536187 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
CACNB3-202ENST00000536187 ARHGAP31Q2M1Z3 1444 aa26.11■■□□□ 1.77
CACNB3-202ENST00000536187 TRPM2O94759 1503 aa26.1■■□□□ 1.77
CACNB3-202ENST00000536187 FBXO31Q5XUX0 539 aaPredicted RBP26.1■■□□□ 1.77
CACNB3-202ENST00000536187 PPP6R1Q9UPN7 881 aa26.1■■□□□ 1.77
CACNB3-202ENST00000536187 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
CACNB3-202ENST00000536187 CLTCL1P53675 1640 aa26.1■■□□□ 1.77
CACNB3-202ENST00000536187 PREX1Q8TCU6 1659 aa26.09■■□□□ 1.77
CACNB3-202ENST00000536187 SYNMO15061 1565 aa26.09■■□□□ 1.77
CACNB3-202ENST00000536187 ADAMTSL3P82987 1691 aa26.08■■□□□ 1.77
CACNB3-202ENST00000536187 ZMYM3Q14202 1370 aa26.07■■□□□ 1.76
CACNB3-202ENST00000536187 NOS1P29475 1434 aa26.06■■□□□ 1.76
CACNB3-202ENST00000536187 MROH2AA6NES4 1674 aa26.04■■□□□ 1.76
CACNB3-202ENST00000536187 RIMS1Q86UR5 1692 aaKnown RBP26.04■■□□□ 1.76
CACNB3-202ENST00000536187 CCDC144AA2RUR9 1427 aa26.04■■□□□ 1.76
CACNB3-202ENST00000536187 CEBPAP49715 358 aaPredicted RBP26.04■■□□□ 1.76
CACNB3-202ENST00000536187 ERVK-7P63135 1459 aa26.03■■□□□ 1.76
CACNB3-202ENST00000536187 C3P01024 1663 aa26.03■■□□□ 1.76
CACNB3-202ENST00000536187 ESF1Q9H501 851 aaKnown RBP26.03■■□□□ 1.76
CACNB3-202ENST00000536187 CNTLNQ9NXG0 1405 aa26.01■■□□□ 1.75
CACNB3-202ENST00000536187 SPATA31D1Q6ZQQ2 1576 aa25.99■■□□□ 1.75
CACNB3-202ENST00000536187 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CACNB3-202ENST00000536187 PIK3C2BO00750 1634 aa25.98■■□□□ 1.75
CACNB3-202ENST00000536187 TONSLQ96HA7 1378 aa25.95■■□□□ 1.74
CACNB3-202ENST00000536187 L3MBTL2Q969R5 705 aa25.94■■□□□ 1.74
CACNB3-202ENST00000536187 SPATA31E1Q6ZUB1 1445 aa25.94■■□□□ 1.74
CACNB3-202ENST00000536187 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
CACNB3-202ENST00000536187 IDI1Q13907 227 aa25.91■■□□□ 1.74
CACNB3-202ENST00000536187 RGL3Q3MIN7 710 aa25.91■■□□□ 1.74
CACNB3-202ENST00000536187 KIF1BO60333 1816 aa25.9■■□□□ 1.74
CACNB3-202ENST00000536187 MYO5BQ9ULV0 1848 aa25.88■■□□□ 1.73
CACNB3-202ENST00000536187 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
CACNB3-202ENST00000536187 TNRQ92752 1358 aa25.86■■□□□ 1.73
CACNB3-202ENST00000536187 PTPRMP28827 1452 aa25.85■■□□□ 1.73
CACNB3-202ENST00000536187 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
CACNB3-202ENST00000536187 TMEM131LA2VDJ0 1609 aa25.84■■□□□ 1.73
CACNB3-202ENST00000536187 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
CACNB3-202ENST00000536187 PPP1R15AO75807 674 aaPredicted RBP25.82■■□□□ 1.72
CACNB3-202ENST00000536187 SLC52A1Q9NWF4 448 aa25.81■■□□□ 1.72
CACNB3-202ENST00000536187 TIMELESSQ9UNS1 1208 aa25.81■■□□□ 1.72
CACNB3-202ENST00000536187 DCAF11Q8TEB1 546 aa25.79■■□□□ 1.72
CACNB3-202ENST00000536187 NEURL4Q96JN8 1562 aa25.79■■□□□ 1.72
CACNB3-202ENST00000536187 NBPF8Q3BBV2 869 aa25.79■■□□□ 1.72
CACNB3-202ENST00000536187 KDM2AQ9Y2K7 1162 aa25.79■■□□□ 1.72
CACNB3-202ENST00000536187 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
CACNB3-202ENST00000536187 IFT172Q9UG01 1749 aa25.78■■□□□ 1.72
CACNB3-202ENST00000536187 A2ML1A8K2U0 1454 aa25.75■■□□□ 1.71
CACNB3-202ENST00000536187 UBR1Q8IWV7 1749 aa25.75■■□□□ 1.71
CACNB3-202ENST00000536187 PPLO60437 1756 aa25.74■■□□□ 1.71
CACNB3-202ENST00000536187 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
CACNB3-202ENST00000536187 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
CACNB3-202ENST00000536187 NUTM2DQ5VT03 806 aaPredicted RBP25.72■■□□□ 1.71
CACNB3-202ENST00000536187 NLRP1Q9C000 1473 aa25.71■■□□□ 1.71
CACNB3-202ENST00000536187 PRAG1Q86YV5 1406 aa25.69■■□□□ 1.7
CACNB3-202ENST00000536187 STAG3Q9UJ98 1225 aa25.68■■□□□ 1.7
CACNB3-202ENST00000536187 ADGRF5Q8IZF2 1346 aa25.68■■□□□ 1.7
CACNB3-202ENST00000536187 UHRF1BP1Q6BDS2 1440 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms