RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 HRCP23327 699 aa23.23■■□□□ 1.31
CNN1-202ENST00000535659 MLECQ14165 292 aa23.23■■□□□ 1.31
CNN1-202ENST00000535659 BCORL1Q5H9F3 1711 aa23.23■■□□□ 1.31
CNN1-202ENST00000535659 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
CNN1-202ENST00000535659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
CNN1-202ENST00000535659 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.3
CNN1-202ENST00000535659 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
CNN1-202ENST00000535659 RNF17Q9BXT8 1623 aaKnown RBP23.18■■□□□ 1.3
CNN1-202ENST00000535659 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
CNN1-202ENST00000535659 DEPDC5O75140 1603 aa23.16■■□□□ 1.3
CNN1-202ENST00000535659 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
CNN1-202ENST00000535659 UNC13BO14795 1591 aa23.15■■□□□ 1.3
CNN1-202ENST00000535659 NUP155O75694 1391 aa23.14■■□□□ 1.3
CNN1-202ENST00000535659 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.29
CNN1-202ENST00000535659 KANK1Q14678 1352 aa23.13■■□□□ 1.29
CNN1-202ENST00000535659 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
CNN1-202ENST00000535659 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
CNN1-202ENST00000535659 VWDEQ8N2E2 1590 aa23.07■■□□□ 1.28
CNN1-202ENST00000535659 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
CNN1-202ENST00000535659 ABCC3O15438 1527 aa23.05■■□□□ 1.28
CNN1-202ENST00000535659 IQGAP3Q86VI3 1631 aa23.05■■□□□ 1.28
CNN1-202ENST00000535659 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
CNN1-202ENST00000535659 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
CNN1-202ENST00000535659 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
CNN1-202ENST00000535659 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
CNN1-202ENST00000535659 MADDQ8WXG6 1647 aa23.03■■□□□ 1.28
CNN1-202ENST00000535659 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
CNN1-202ENST00000535659 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
CNN1-202ENST00000535659 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
CNN1-202ENST00000535659 CEP152O94986 1710 aa23.03■■□□□ 1.28
CNN1-202ENST00000535659 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
CNN1-202ENST00000535659 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
CNN1-202ENST00000535659 PZPP20742 1482 aa23.02■■□□□ 1.28
CNN1-202ENST00000535659 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
CNN1-202ENST00000535659 PKD2Q13563 968 aa22.98■■□□□ 1.27
CNN1-202ENST00000535659 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
CNN1-202ENST00000535659 TET3O43151 1660 aa22.97■■□□□ 1.27
CNN1-202ENST00000535659 RIMS1Q86UR5 1692 aaKnown RBP22.97■■□□□ 1.27
CNN1-202ENST00000535659 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
CNN1-202ENST00000535659 MROH2AA6NES4 1674 aa22.96■■□□□ 1.27
CNN1-202ENST00000535659 CEBPAP49715 358 aaPredicted RBP22.95■■□□□ 1.26
CNN1-202ENST00000535659 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
CNN1-202ENST00000535659 FBXO31Q5XUX0 539 aaPredicted RBP22.92■■□□□ 1.26
CNN1-202ENST00000535659 NPATQ14207 1427 aa22.91■■□□□ 1.26
CNN1-202ENST00000535659 FOXD1Q16676 465 aa22.91■■□□□ 1.26
CNN1-202ENST00000535659 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
CNN1-202ENST00000535659 E9PCH4 1651 aa22.9■■□□□ 1.26
CNN1-202ENST00000535659 C3P01024 1663 aa22.9■■□□□ 1.26
CNN1-202ENST00000535659 PTPRMP28827 1452 aa22.89■■□□□ 1.25
CNN1-202ENST00000535659 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
CNN1-202ENST00000535659 DHX57Q6P158 1386 aaKnown RBP22.89■■□□□ 1.25
CNN1-202ENST00000535659 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
CNN1-202ENST00000535659 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
CNN1-202ENST00000535659 PTPRTO14522 1441 aa22.82■■□□□ 1.24
CNN1-202ENST00000535659 NOS1P29475 1434 aa22.82■■□□□ 1.24
CNN1-202ENST00000535659 SPATA31D1Q6ZQQ2 1576 aa22.81■■□□□ 1.24
CNN1-202ENST00000535659 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
CNN1-202ENST00000535659 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
CNN1-202ENST00000535659 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
CNN1-202ENST00000535659 TNRQ92752 1358 aa22.78■■□□□ 1.24
CNN1-202ENST00000535659 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
CNN1-202ENST00000535659 CCER1Q8TC90 406 aaPredicted RBP22.78■■□□□ 1.24
CNN1-202ENST00000535659 SLC52A1Q9NWF4 448 aa22.78■■□□□ 1.24
CNN1-202ENST00000535659 SYNMO15061 1565 aa22.77■■□□□ 1.24
CNN1-202ENST00000535659 TRPM2O94759 1503 aa22.76■■□□□ 1.23
CNN1-202ENST00000535659 IDI1Q13907 227 aa22.76■■□□□ 1.23
CNN1-202ENST00000535659 FBXO41Q8TF61 875 aa22.72■■□□□ 1.23
CNN1-202ENST00000535659 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
CNN1-202ENST00000535659 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.23
CNN1-202ENST00000535659 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.22
CNN1-202ENST00000535659 CLSPNQ9HAW4 1339 aa22.7■■□□□ 1.22
CNN1-202ENST00000535659 SIN3AQ96ST3 1273 aa22.69■■□□□ 1.22
CNN1-202ENST00000535659 PIK3C2BO00750 1634 aa22.69■■□□□ 1.22
CNN1-202ENST00000535659 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
CNN1-202ENST00000535659 NLRP1Q9C000 1473 aa22.68■■□□□ 1.22
CNN1-202ENST00000535659 MYO3AQ8NEV4 1616 aa22.68■■□□□ 1.22
CNN1-202ENST00000535659 CHGAP10645 457 aaKnown RBP22.67■■□□□ 1.22
CNN1-202ENST00000535659 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
CNN1-202ENST00000535659 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
CNN1-202ENST00000535659 UHRF1BP1Q6BDS2 1440 aa22.64■■□□□ 1.21
CNN1-202ENST00000535659 A2ML1A8K2U0 1454 aa22.62■■□□□ 1.21
CNN1-202ENST00000535659 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
CNN1-202ENST00000535659 CEP170BQ9Y4F5 1589 aaPredicted RBP22.61■■□□□ 1.21
CNN1-202ENST00000535659 ADGRB3O60242 1522 aa22.6■■□□□ 1.21
CNN1-202ENST00000535659 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
CNN1-202ENST00000535659 ZNF142P52746 1687 aaPredicted RBP22.59■■□□□ 1.21
CNN1-202ENST00000535659 KIF1BO60333 1816 aa22.58■■□□□ 1.21
CNN1-202ENST00000535659 TMEM131LA2VDJ0 1609 aa22.58■■□□□ 1.21
CNN1-202ENST00000535659 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
CNN1-202ENST00000535659 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
CNN1-202ENST00000535659 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
CNN1-202ENST00000535659 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
CNN1-202ENST00000535659 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
CNN1-202ENST00000535659 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
CNN1-202ENST00000535659 NEURL4Q96JN8 1562 aa22.53■■□□□ 1.2
CNN1-202ENST00000535659 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
CNN1-202ENST00000535659 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
CNN1-202ENST00000535659 TMEM2Q9UHN6 1383 aa22.51■■□□□ 1.19
CNN1-202ENST00000535659 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
CNN1-202ENST00000535659 HSPA2P54652 639 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms