RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 COL17A1Q9UMD9 1497 aaPredicted RBP33.6■■■□□ 2.97
RBFOX1-206ENST00000535565 DEPDC5O75140 1603 aa33.58■■■□□ 2.97
RBFOX1-206ENST00000535565 SLC4A1APQ9BWU0 796 aaKnown RBP33.57■■■□□ 2.96
RBFOX1-206ENST00000535565 YEATS2Q9ULM3 1422 aa33.56■■■□□ 2.96
RBFOX1-206ENST00000535565 IQGAP3Q86VI3 1631 aa33.56■■■□□ 2.96
RBFOX1-206ENST00000535565 BCORL1Q5H9F3 1711 aa33.54■■■□□ 2.96
RBFOX1-206ENST00000535565 FAM135AQ9P2D6 1515 aa33.53■■■□□ 2.96
RBFOX1-206ENST00000535565 RNF17Q9BXT8 1623 aaKnown RBP33.5■■■□□ 2.95
RBFOX1-206ENST00000535565 KIF3BO15066 747 aa33.5■■■□□ 2.95
RBFOX1-206ENST00000535565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.5■■■□□ 2.95
RBFOX1-206ENST00000535565 ARHGEF40Q8TER5 1519 aa33.49■■■□□ 2.95
RBFOX1-206ENST00000535565 ATP10AO60312 1499 aa33.48■■■□□ 2.95
RBFOX1-206ENST00000535565 PRDM15P57071 1507 aaPredicted RBP33.48■■■□□ 2.95
RBFOX1-206ENST00000535565 REREQ9P2R6 1566 aa33.47■■■□□ 2.95
RBFOX1-206ENST00000535565 KANK1Q14678 1352 aa33.45■■■□□ 2.95
RBFOX1-206ENST00000535565 MROH1Q8NDA8 1641 aa33.44■■■□□ 2.94
RBFOX1-206ENST00000535565 PKD2Q13563 968 aa33.41■■■□□ 2.94
RBFOX1-206ENST00000535565 VWDEQ8N2E2 1590 aa33.41■■■□□ 2.94
RBFOX1-206ENST00000535565 FOXD1Q16676 465 aa33.37■■■□□ 2.93
RBFOX1-206ENST00000535565 TET3O43151 1660 aa33.36■■■□□ 2.93
RBFOX1-206ENST00000535565 ANKRD30BQ9BXX2 1392 aa33.34■■■□□ 2.93
RBFOX1-206ENST00000535565 AGLP35573 1532 aa33.34■■■□□ 2.93
RBFOX1-206ENST00000535565 SIN3AQ96ST3 1273 aa33.33■■■□□ 2.93
RBFOX1-206ENST00000535565 NEUROD1Q13562 356 aa33.31■■■□□ 2.92
RBFOX1-206ENST00000535565 CEP152O94986 1710 aa33.31■■■□□ 2.92
RBFOX1-206ENST00000535565 GGT6Q6P531 493 aa33.3■■■□□ 2.92
RBFOX1-206ENST00000535565 LMTK2Q8IWU2 1503 aa33.29■■■□□ 2.92
RBFOX1-206ENST00000535565 E9PCH4 1651 aa33.28■■■□□ 2.92
RBFOX1-206ENST00000535565 ZC3H13Q5T200 1668 aaKnown RBP33.28■■■□□ 2.92
RBFOX1-206ENST00000535565 SIGLEC1Q9BZZ2 1709 aa33.25■■■□□ 2.91
RBFOX1-206ENST00000535565 EFCAB6Q5THR3 1501 aa33.23■■■□□ 2.91
RBFOX1-206ENST00000535565 TIMELESSQ9UNS1 1208 aa33.23■■■□□ 2.91
RBFOX1-206ENST00000535565 ABCC3O15438 1527 aa33.21■■■□□ 2.91
RBFOX1-206ENST00000535565 RPRD2Q5VT52 1461 aaKnown RBP33.2■■■□□ 2.91
RBFOX1-206ENST00000535565 TONSLQ96HA7 1378 aa33.19■■■□□ 2.9
RBFOX1-206ENST00000535565 WASHC2CQ9Y4E1 1318 aa33.18■■■□□ 2.9
RBFOX1-206ENST00000535565 CAMSAP1Q5T5Y3 1602 aa33.18■■■□□ 2.9
RBFOX1-206ENST00000535565 SPHKAPQ2M3C7 1700 aa33.18■■■□□ 2.9
RBFOX1-206ENST00000535565 PPP6R1Q9UPN7 881 aa33.13■■■□□ 2.89
RBFOX1-206ENST00000535565 CCDC144AA2RUR9 1427 aa33.11■■■□□ 2.89
RBFOX1-206ENST00000535565 PLA2R1Q13018 1463 aa33.1■■■□□ 2.89
RBFOX1-206ENST00000535565 TRPM2O94759 1503 aa33.1■■■□□ 2.89
RBFOX1-206ENST00000535565 ARID4BQ4LE39 1312 aaPredicted RBP33.08■■■□□ 2.89
RBFOX1-206ENST00000535565 PTPRTO14522 1441 aa33.07■■■□□ 2.88
RBFOX1-206ENST00000535565 CLTCQ00610 1675 aaKnown RBP33.05■■■□□ 2.88
RBFOX1-206ENST00000535565 NPATQ14207 1427 aa33.04■■■□□ 2.88
RBFOX1-206ENST00000535565 ARHGAP31Q2M1Z3 1444 aa33.04■■■□□ 2.88
RBFOX1-206ENST00000535565 MLECQ14165 292 aa33.02■■■□□ 2.88
RBFOX1-206ENST00000535565 CFAP65Q6ZU64 1925 aaKnown RBP33.01■■■□□ 2.88
RBFOX1-206ENST00000535565 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
RBFOX1-206ENST00000535565 CLTCL1P53675 1640 aa32.97■■■□□ 2.87
RBFOX1-206ENST00000535565 CNTLNQ9NXG0 1405 aa32.95■■■□□ 2.87
RBFOX1-206ENST00000535565 PPP1R15AO75807 674 aaPredicted RBP32.94■■■□□ 2.86
RBFOX1-206ENST00000535565 PREX1Q8TCU6 1659 aa32.94■■■□□ 2.86
RBFOX1-206ENST00000535565 L3MBTL2Q969R5 705 aa32.93■■■□□ 2.86
RBFOX1-206ENST00000535565 KIF1BO60333 1816 aa32.91■■■□□ 2.86
RBFOX1-206ENST00000535565 NOS1P29475 1434 aa32.9■■■□□ 2.86
RBFOX1-206ENST00000535565 MROH2AA6NES4 1674 aa32.89■■■□□ 2.86
RBFOX1-206ENST00000535565 FER1L4A9Z1Z3 1794 aa32.87■■■□□ 2.85
RBFOX1-206ENST00000535565 SYNMO15061 1565 aa32.86■■■□□ 2.85
RBFOX1-206ENST00000535565 UGGT1Q9NYU2 1555 aa32.86■■■□□ 2.85
RBFOX1-206ENST00000535565 NEURL4Q96JN8 1562 aa32.85■■■□□ 2.85
RBFOX1-206ENST00000535565 PIK3C2BO00750 1634 aa32.83■■■□□ 2.85
RBFOX1-206ENST00000535565 ERVK-7P63135 1459 aa32.82■■■□□ 2.84
RBFOX1-206ENST00000535565 SPATA31E1Q6ZUB1 1445 aa32.82■■■□□ 2.84
RBFOX1-206ENST00000535565 ZMYM3Q14202 1370 aa32.8■■■□□ 2.84
RBFOX1-206ENST00000535565 SPATA31D1Q6ZQQ2 1576 aa32.79■■■□□ 2.84
RBFOX1-206ENST00000535565 RGL3Q3MIN7 710 aa32.78■■■□□ 2.84
RBFOX1-206ENST00000535565 ADGRB3O60242 1522 aa32.74■■■□□ 2.83
RBFOX1-206ENST00000535565 DCAF11Q8TEB1 546 aa32.74■■■□□ 2.83
RBFOX1-206ENST00000535565 SLC52A1Q9NWF4 448 aa32.74■■■□□ 2.83
RBFOX1-206ENST00000535565 FBXO31Q5XUX0 539 aaPredicted RBP32.73■■■□□ 2.83
RBFOX1-206ENST00000535565 UHRF1BP1Q6BDS2 1440 aa32.7■■■□□ 2.83
RBFOX1-206ENST00000535565 C3P01024 1663 aa32.7■■■□□ 2.83
RBFOX1-206ENST00000535565 KDM2AQ9Y2K7 1162 aa32.68■■■□□ 2.82
RBFOX1-206ENST00000535565 MADDQ8WXG6 1647 aa32.68■■■□□ 2.82
RBFOX1-206ENST00000535565 ADAMTSL3P82987 1691 aa32.67■■■□□ 2.82
RBFOX1-206ENST00000535565 IFT172Q9UG01 1749 aa32.66■■■□□ 2.82
RBFOX1-206ENST00000535565 CHGAP10645 457 aaKnown RBP32.66■■■□□ 2.82
RBFOX1-206ENST00000535565 RIMS1Q86UR5 1692 aaKnown RBP32.65■■■□□ 2.82
RBFOX1-206ENST00000535565 STAC3Q96MF2 364 aa32.65■■■□□ 2.82
RBFOX1-206ENST00000535565 IDI1Q13907 227 aa32.64■■■□□ 2.82
RBFOX1-206ENST00000535565 NBPF8Q3BBV2 869 aa32.64■■■□□ 2.82
RBFOX1-206ENST00000535565 ZNF326Q5BKZ1 582 aaKnown RBP32.64■■■□□ 2.82
RBFOX1-206ENST00000535565 TMEM131LA2VDJ0 1609 aa32.62■■■□□ 2.81
RBFOX1-206ENST00000535565 MYO5BQ9ULV0 1848 aa32.61■■■□□ 2.81
RBFOX1-206ENST00000535565 PRAG1Q86YV5 1406 aa32.61■■■□□ 2.81
RBFOX1-206ENST00000535565 PPLO60437 1756 aa32.6■■■□□ 2.81
RBFOX1-206ENST00000535565 TNRQ92752 1358 aa32.59■■■□□ 2.81
RBFOX1-206ENST00000535565 MYOM2P54296 1465 aa32.57■■■□□ 2.8
RBFOX1-206ENST00000535565 RALGAPBQ86X10 1494 aa32.57■■■□□ 2.8
RBFOX1-206ENST00000535565 RPGRIP1LQ68CZ1 1315 aa32.56■■■□□ 2.8
RBFOX1-206ENST00000535565 TRPM1Q7Z4N2 1603 aa32.56■■■□□ 2.8
RBFOX1-206ENST00000535565 ZNF316A6NFI3 1004 aaPredicted RBP32.54■■■□□ 2.8
RBFOX1-206ENST00000535565 KDM5AP29375 1690 aaKnown RBP32.52■■■□□ 2.8
RBFOX1-206ENST00000535565 CEBPAP49715 358 aaPredicted RBP32.52■■■□□ 2.8
RBFOX1-206ENST00000535565 STAG3Q9UJ98 1225 aa32.52■■■□□ 2.8
RBFOX1-206ENST00000535565 NEXMIFQ5QGS0 1516 aa32.5■■■□□ 2.79
RBFOX1-206ENST00000535565 NLRP1Q9C000 1473 aa32.49■■■□□ 2.79
RBFOX1-206ENST00000535565 KIAA1210Q9ULL0 1709 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms