RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CLTCQ00610 1675 aaKnown RBP33.27■■■□□ 2.92
SSPN-204ENST00000535504 WASHC2CQ9Y4E1 1318 aa33.27■■■□□ 2.92
SSPN-204ENST00000535504 ADGRL2O95490 1459 aa33.26■■■□□ 2.92
SSPN-204ENST00000535504 ITGAEP38570 1179 aa33.26■■■□□ 2.91
SSPN-204ENST00000535504 NCOA1Q15788 1441 aa33.25■■■□□ 2.91
SSPN-204ENST00000535504 ZMYM3Q14202 1370 aa33.24■■■□□ 2.91
SSPN-204ENST00000535504 C3P01024 1663 aa33.24■■■□□ 2.91
SSPN-204ENST00000535504 KDM5DQ9BY66 1539 aa33.23■■■□□ 2.91
SSPN-204ENST00000535504 RRBP1Q9P2E9 1410 aaKnown RBP33.22■■■□□ 2.91
SSPN-204ENST00000535504 RNF17Q9BXT8 1623 aaKnown RBP33.2■■■□□ 2.91
SSPN-204ENST00000535504 SETD1BQ9UPS6 1966 aaKnown RBP33.19■■■□□ 2.9
SSPN-204ENST00000535504 KANK1Q14678 1352 aa33.18■■■□□ 2.9
SSPN-204ENST00000535504 ROCK1Q13464 1354 aa33.16■■■□□ 2.9
SSPN-204ENST00000535504 NPATQ14207 1427 aa33.15■■■□□ 2.9
SSPN-204ENST00000535504 UHRF1BP1Q6BDS2 1440 aa33.15■■■□□ 2.9
SSPN-204ENST00000535504 PREX1Q8TCU6 1659 aa33.15■■■□□ 2.9
SSPN-204ENST00000535504 ZC3H13Q5T200 1668 aaKnown RBP33.13■■■□□ 2.89
SSPN-204ENST00000535504 ANKRD50Q9ULJ7 1429 aa33.12■■■□□ 2.89
SSPN-204ENST00000535504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.12■■■□□ 2.89
SSPN-204ENST00000535504 PTPRKQ15262 1439 aa33.1■■■□□ 2.89
SSPN-204ENST00000535504 LMTK3Q96Q04 1460 aa33.09■■■□□ 2.89
SSPN-204ENST00000535504 PRDM15P57071 1507 aaPredicted RBP33.07■■■□□ 2.88
SSPN-204ENST00000535504 ABCC3O15438 1527 aa33.06■■■□□ 2.88
SSPN-204ENST00000535504 PZPP20742 1482 aa33.04■■■□□ 2.88
SSPN-204ENST00000535504 DEPDC5O75140 1603 aa33.02■■■□□ 2.88
SSPN-204ENST00000535504 MROH1Q8NDA8 1641 aa33.02■■■□□ 2.88
SSPN-204ENST00000535504 CEP152O94986 1710 aa32.99■■■□□ 2.87
SSPN-204ENST00000535504 HSPA2P54652 639 aa32.97■■■□□ 2.87
SSPN-204ENST00000535504 TNRQ92752 1358 aa32.96■■■□□ 2.87
SSPN-204ENST00000535504 CAMSAP1Q5T5Y3 1602 aa32.96■■■□□ 2.87
SSPN-204ENST00000535504 MYO3AQ8NEV4 1616 aa32.92■■■□□ 2.86
SSPN-204ENST00000535504 FBXO31Q5XUX0 539 aaPredicted RBP32.92■■■□□ 2.86
SSPN-204ENST00000535504 LMTK2Q8IWU2 1503 aa32.88■■■□□ 2.85
SSPN-204ENST00000535504 ARHGAP31Q2M1Z3 1444 aa32.88■■■□□ 2.85
SSPN-204ENST00000535504 UNC13BO14795 1591 aa32.86■■■□□ 2.85
SSPN-204ENST00000535504 VWDEQ8N2E2 1590 aa32.86■■■□□ 2.85
SSPN-204ENST00000535504 CEP170BQ9Y4F5 1589 aaPredicted RBP32.86■■■□□ 2.85
SSPN-204ENST00000535504 ZNF142P52746 1687 aaPredicted RBP32.85■■■□□ 2.85
SSPN-204ENST00000535504 ERVK-7P63135 1459 aa32.84■■■□□ 2.85
SSPN-204ENST00000535504 NLRP1Q9C000 1473 aa32.84■■■□□ 2.85
SSPN-204ENST00000535504 A2ML1A8K2U0 1454 aa32.83■■■□□ 2.85
SSPN-204ENST00000535504 SPATA31D1Q6ZQQ2 1576 aa32.83■■■□□ 2.85
SSPN-204ENST00000535504 CFAP65Q6ZU64 1925 aaKnown RBP32.82■■■□□ 2.84
SSPN-204ENST00000535504 GCC2Q8IWJ2 1684 aa32.82■■■□□ 2.84
SSPN-204ENST00000535504 DMRT2Q9Y5R5 561 aa32.81■■■□□ 2.84
SSPN-204ENST00000535504 NUP155O75694 1391 aa32.81■■■□□ 2.84
SSPN-204ENST00000535504 HFM1A2PYH4 1435 aa32.8■■■□□ 2.84
SSPN-204ENST00000535504 NAIPQ13075 1403 aa32.79■■■□□ 2.84
SSPN-204ENST00000535504 EFCAB6Q5THR3 1501 aa32.79■■■□□ 2.84
SSPN-204ENST00000535504 TET3O43151 1660 aa32.77■■■□□ 2.84
SSPN-204ENST00000535504 RPRD2Q5VT52 1461 aaKnown RBP32.75■■■□□ 2.83
SSPN-204ENST00000535504 IQGAP3Q86VI3 1631 aa32.74■■■□□ 2.83
SSPN-204ENST00000535504 THEMISQ8N1K5 641 aaPredicted RBP32.74■■■□□ 2.83
SSPN-204ENST00000535504 UGGT1Q9NYU2 1555 aa32.71■■■□□ 2.83
SSPN-204ENST00000535504 TRIM52Q96A61 297 aa32.71■■■□□ 2.83
SSPN-204ENST00000535504 STAG3Q9UJ98 1225 aa32.71■■■□□ 2.83
SSPN-204ENST00000535504 PLA2R1Q13018 1463 aa32.7■■■□□ 2.83
SSPN-204ENST00000535504 PKD2Q13563 968 aa32.69■■■□□ 2.82
SSPN-204ENST00000535504 ACIN1Q9UKV3 1341 aaKnown RBP32.68■■■□□ 2.82
SSPN-204ENST00000535504 SLC52A1Q9NWF4 448 aa32.64■■■□□ 2.82
SSPN-204ENST00000535504 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
SSPN-204ENST00000535504 NOS1P29475 1434 aa32.61■■■□□ 2.81
SSPN-204ENST00000535504 ANKLE2Q86XL3 938 aa32.61■■■□□ 2.81
SSPN-204ENST00000535504 PTPRTO14522 1441 aa32.6■■■□□ 2.81
SSPN-204ENST00000535504 NCKAP5LQ9HCH0 1330 aa32.58■■■□□ 2.81
SSPN-204ENST00000535504 E9PCH4 1651 aa32.58■■■□□ 2.81
SSPN-204ENST00000535504 SYNMO15061 1565 aa32.55■■■□□ 2.8
SSPN-204ENST00000535504 SETD5Q9C0A6 1442 aa32.54■■■□□ 2.8
SSPN-204ENST00000535504 IDI1Q13907 227 aa32.54■■■□□ 2.8
SSPN-204ENST00000535504 UBR1Q8IWV7 1749 aa32.54■■■□□ 2.8
SSPN-204ENST00000535504 PIK3C2BO00750 1634 aa32.53■■■□□ 2.8
SSPN-204ENST00000535504 SLC4A1APQ9BWU0 796 aaKnown RBP32.53■■■□□ 2.8
SSPN-204ENST00000535504 EID1Q9Y6B2 187 aa32.52■■■□□ 2.8
SSPN-204ENST00000535504 POLR1AO95602 1720 aaPredicted RBP32.51■■■□□ 2.8
SSPN-204ENST00000535504 KDM5AP29375 1690 aaKnown RBP32.5■■■□□ 2.79
SSPN-204ENST00000535504 CHGAP10645 457 aaKnown RBP32.47■■■□□ 2.79
SSPN-204ENST00000535504 ADGRB3O60242 1522 aa32.46■■■□□ 2.79
SSPN-204ENST00000535504 HDGFP51858 240 aaKnown RBP32.44■■■□□ 2.78
SSPN-204ENST00000535504 SPHKAPQ2M3C7 1700 aa32.43■■■□□ 2.78
SSPN-204ENST00000535504 TXNDC2Q86VQ3 553 aa32.43■■■□□ 2.78
SSPN-204ENST00000535504 TMEM2Q9UHN6 1383 aa32.42■■■□□ 2.78
SSPN-204ENST00000535504 SCAF11Q99590 1463 aaKnown RBP32.42■■■□□ 2.78
SSPN-204ENST00000535504 SLIT1O75093 1534 aa32.41■■■□□ 2.78
SSPN-204ENST00000535504 NPHP4O75161 1426 aaPredicted RBP32.41■■■□□ 2.78
SSPN-204ENST00000535504 RAB3GAP2Q9H2M9 1393 aa32.39■■■□□ 2.78
SSPN-204ENST00000535504 ARHGAP23Q9P227 1491 aa32.38■■■□□ 2.77
SSPN-204ENST00000535504 MED14O60244 1454 aa32.36■■■□□ 2.77
SSPN-204ENST00000535504 NEURL4Q96JN8 1562 aa32.36■■■□□ 2.77
SSPN-204ENST00000535504 PPP1R15AO75807 674 aaPredicted RBP32.35■■■□□ 2.77
SSPN-204ENST00000535504 MPHOSPH9Q99550 1183 aa32.35■■■□□ 2.77
SSPN-204ENST00000535504 IQGAP1P46940 1657 aa32.34■■■□□ 2.77
SSPN-204ENST00000535504 TRPM2O94759 1503 aa32.33■■■□□ 2.77
SSPN-204ENST00000535504 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.32■■■□□ 2.76
SSPN-204ENST00000535504 BCANQ96GW7 911 aa32.32■■■□□ 2.76
SSPN-204ENST00000535504 TMEM131LA2VDJ0 1609 aa32.31■■■□□ 2.76
SSPN-204ENST00000535504 LTKP29376 864 aa32.3■■■□□ 2.76
SSPN-204ENST00000535504 HRCP23327 699 aa32.29■■■□□ 2.76
SSPN-204ENST00000535504 ZNF326Q5BKZ1 582 aaKnown RBP32.29■■■□□ 2.76
SSPN-204ENST00000535504 RIMS2Q9UQ26 1411 aa32.27■■■□□ 2.76
SSPN-204ENST00000535504 CERKQ8TCT0 537 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms