RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 AMPHP49418 695 aa15.8■□□□□ 0.12
SPG11-203ENST00000535302 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
SPG11-203ENST00000535302 CCAR2Q8N163 923 aaKnown RBP15.8■□□□□ 0.12
SPG11-203ENST00000535302 MARCH6O60337 910 aa15.79■□□□□ 0.12
SPG11-203ENST00000535302 EFCAB2Q5VUJ9 269 aa15.79■□□□□ 0.12
SPG11-203ENST00000535302 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
SPG11-203ENST00000535302 SPAG9O60271 1321 aaKnown RBP15.79■□□□□ 0.12
SPG11-203ENST00000535302 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
SPG11-203ENST00000535302 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
SPG11-203ENST00000535302 NGEFQ8N5V2 710 aa15.77■□□□□ 0.12
SPG11-203ENST00000535302 MSH5O43196 834 aa15.77■□□□□ 0.12
SPG11-203ENST00000535302 PLIN1O60240 522 aa15.77■□□□□ 0.12
SPG11-203ENST00000535302 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
SPG11-203ENST00000535302 RALBP1Q15311 655 aa15.77■□□□□ 0.11
SPG11-203ENST00000535302 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.11
SPG11-203ENST00000535302 GOLGA6L1Q8N7Z2 621 aa15.75■□□□□ 0.11
SPG11-203ENST00000535302 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
SPG11-203ENST00000535302 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
SPG11-203ENST00000535302 KRI1Q8N9T8 703 aaKnown RBP15.74■□□□□ 0.11
SPG11-203ENST00000535302 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
SPG11-203ENST00000535302 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
SPG11-203ENST00000535302 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
SPG11-203ENST00000535302 TERF2IPQ9NYB0 399 aa15.73■□□□□ 0.11
SPG11-203ENST00000535302 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
SPG11-203ENST00000535302 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
SPG11-203ENST00000535302 TPM4P67936 248 aa15.73■□□□□ 0.11
SPG11-203ENST00000535302 CEP89Q96ST8 783 aa15.73■□□□□ 0.11
SPG11-203ENST00000535302 EIF3AQ14152 1382 aaKnown RBP15.72■□□□□ 0.11
SPG11-203ENST00000535302 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
SPG11-203ENST00000535302 GTF2E1P29083 439 aaPredicted RBP15.72■□□□□ 0.11
SPG11-203ENST00000535302 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
SPG11-203ENST00000535302 PANK3Q9H999 370 aa15.71■□□□□ 0.1
SPG11-203ENST00000535302 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
SPG11-203ENST00000535302 FOSBP53539 338 aa15.7■□□□□ 0.1
SPG11-203ENST00000535302 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SPG11-203ENST00000535302 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
SPG11-203ENST00000535302 TPD52L1Q16890 204 aaPredicted RBP15.7■□□□□ 0.1
SPG11-203ENST00000535302 RILPL2Q969X0 211 aa15.7■□□□□ 0.1
SPG11-203ENST00000535302 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
SPG11-203ENST00000535302 ST20-MTHFSA0A0A6YYL1 179 aa15.68■□□□□ 0.1
SPG11-203ENST00000535302 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
SPG11-203ENST00000535302 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
SPG11-203ENST00000535302 ZNF592Q92610 1267 aa15.68■□□□□ 0.1
SPG11-203ENST00000535302 KDM4AO75164 1064 aa15.68■□□□□ 0.1
SPG11-203ENST00000535302 PTMSP20962 102 aa15.68■□□□□ 0.1
SPG11-203ENST00000535302 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
SPG11-203ENST00000535302 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
SPG11-203ENST00000535302 GOLGA6L3A6NEY3 463 aa15.67■□□□□ 0.1
SPG11-203ENST00000535302 HMMRO75330 724 aa15.65■□□□□ 0.1
SPG11-203ENST00000535302 FMN1Q68DA7 1419 aa15.65■□□□□ 0.1
SPG11-203ENST00000535302 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
SPG11-203ENST00000535302 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
SPG11-203ENST00000535302 ANKRD45Q5TZF3 282 aa15.64■□□□□ 0.09
SPG11-203ENST00000535302 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SPG11-203ENST00000535302 EVA1CP58658 441 aa15.64■□□□□ 0.09
SPG11-203ENST00000535302 MCTP1Q6DN14 999 aa15.64■□□□□ 0.09
SPG11-203ENST00000535302 TPM3P06753 285 aa15.64■□□□□ 0.09
SPG11-203ENST00000535302 H3BQV1 296 aa15.63■□□□□ 0.09
SPG11-203ENST00000535302 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
SPG11-203ENST00000535302 PCMTD1Q96MG8 357 aaPredicted RBP15.63■□□□□ 0.09
SPG11-203ENST00000535302 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
SPG11-203ENST00000535302 WIZO95785 1651 aa15.63■□□□□ 0.09
SPG11-203ENST00000535302 SYAP1Q96A49 352 aaPredicted RBP15.62■□□□□ 0.09
SPG11-203ENST00000535302 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
SPG11-203ENST00000535302 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
SPG11-203ENST00000535302 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
SPG11-203ENST00000535302 EXOC6Q8TAG9 804 aa15.61■□□□□ 0.09
SPG11-203ENST00000535302 C1orf141Q5JVX7 400 aa15.6■□□□□ 0.09
SPG11-203ENST00000535302 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
SPG11-203ENST00000535302 COG3Q96JB2 828 aa15.6■□□□□ 0.09
SPG11-203ENST00000535302 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
SPG11-203ENST00000535302 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
SPG11-203ENST00000535302 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
SPG11-203ENST00000535302 TCEAL9Q9UHQ7 104 aa15.59■□□□□ 0.09
SPG11-203ENST00000535302 KIF16BQ96L93 1317 aa15.59■□□□□ 0.09
SPG11-203ENST00000535302 MTMR7Q9Y216 660 aa15.59■□□□□ 0.09
SPG11-203ENST00000535302 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.09
SPG11-203ENST00000535302 NUTM2GQ5VZR2 741 aa15.58■□□□□ 0.08
SPG11-203ENST00000535302 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
SPG11-203ENST00000535302 SKIDA1Q1XH10 827 aa15.57■□□□□ 0.08
SPG11-203ENST00000535302 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
SPG11-203ENST00000535302 FAM184AQ8NB25 1140 aa15.56■□□□□ 0.08
SPG11-203ENST00000535302 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
SPG11-203ENST00000535302 KIF15Q9NS87 1388 aa15.56■□□□□ 0.08
SPG11-203ENST00000535302 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
SPG11-203ENST00000535302 DHX16O60231 1041 aaKnown RBP15.56■□□□□ 0.08
SPG11-203ENST00000535302 DHX37Q8IY37 1157 aaKnown RBP15.55■□□□□ 0.08
SPG11-203ENST00000535302 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
SPG11-203ENST00000535302 APAF1O14727 1248 aa15.54■□□□□ 0.08
SPG11-203ENST00000535302 FYB1O15117 783 aa15.54■□□□□ 0.08
SPG11-203ENST00000535302 CTDP1Q9Y5B0 961 aaPredicted RBP15.54■□□□□ 0.08
SPG11-203ENST00000535302 ST18O60284 1047 aa15.54■□□□□ 0.08
SPG11-203ENST00000535302 APPP05067 770 aa15.54■□□□□ 0.08
SPG11-203ENST00000535302 TSR1Q2NL82 804 aaKnown RBP15.53■□□□□ 0.08
SPG11-203ENST00000535302 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
SPG11-203ENST00000535302 ZNF771Q7L3S4 317 aaPredicted RBP15.53■□□□□ 0.08
SPG11-203ENST00000535302 RUSC2Q8N2Y8 1516 aa15.53■□□□□ 0.08
SPG11-203ENST00000535302 TEFQ10587 303 aa15.53■□□□□ 0.08
SPG11-203ENST00000535302 AKAP17AQ02040 695 aaKnown RBP15.52■□□□□ 0.08
SPG11-203ENST00000535302 HMOX1P09601 288 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms