RNA–Protein interactions for RNA: ENST00000535112.1

LDHB-207, Transcript of lactate dehydrogenase B, humanhuman

TSL 5

Gene LDHB, Length 252 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-207ENST00000535112 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
LDHB-207ENST00000535112 PRDM15P57071 1507 aaPredicted RBP15.75■□□□□ 0.11
LDHB-207ENST00000535112 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
LDHB-207ENST00000535112 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
LDHB-207ENST00000535112 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
LDHB-207ENST00000535112 CAMSAP1Q5T5Y3 1602 aa15.74■□□□□ 0.11
LDHB-207ENST00000535112 ZNF142P52746 1687 aaPredicted RBP15.73■□□□□ 0.11
LDHB-207ENST00000535112 PTPRKQ15262 1439 aa15.73■□□□□ 0.11
LDHB-207ENST00000535112 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
LDHB-207ENST00000535112 GGT6Q6P531 493 aa15.72■□□□□ 0.11
LDHB-207ENST00000535112 ABCC3O15438 1527 aa15.72■□□□□ 0.11
LDHB-207ENST00000535112 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
LDHB-207ENST00000535112 NCOA1Q15788 1441 aa15.71■□□□□ 0.11
LDHB-207ENST00000535112 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
LDHB-207ENST00000535112 KIF3BO15066 747 aa15.71■□□□□ 0.11
LDHB-207ENST00000535112 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
LDHB-207ENST00000535112 ANKRD30AQ9BXX3 1397 aa15.7■□□□□ 0.1
LDHB-207ENST00000535112 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
LDHB-207ENST00000535112 GCC2Q8IWJ2 1684 aa15.68■□□□□ 0.1
LDHB-207ENST00000535112 RRP7BPQ9NSQ0 103 aa15.68■□□□□ 0.1
LDHB-207ENST00000535112 UNC13BO14795 1591 aa15.67■□□□□ 0.1
LDHB-207ENST00000535112 ZMYM3Q14202 1370 aa15.67■□□□□ 0.1
LDHB-207ENST00000535112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
LDHB-207ENST00000535112 NPATQ14207 1427 aa15.67■□□□□ 0.1
LDHB-207ENST00000535112 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
LDHB-207ENST00000535112 PZPP20742 1482 aa15.66■□□□□ 0.1
LDHB-207ENST00000535112 STRCQ7RTU9 1775 aa15.66■□□□□ 0.1
LDHB-207ENST00000535112 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
LDHB-207ENST00000535112 CEP170BQ9Y4F5 1589 aaPredicted RBP15.65■□□□□ 0.1
LDHB-207ENST00000535112 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
LDHB-207ENST00000535112 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
LDHB-207ENST00000535112 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
LDHB-207ENST00000535112 ANKRD50Q9ULJ7 1429 aa15.62■□□□□ 0.09
LDHB-207ENST00000535112 HSPA2P54652 639 aa15.61■□□□□ 0.09
LDHB-207ENST00000535112 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
LDHB-207ENST00000535112 WASHC2CQ9Y4E1 1318 aa15.61■□□□□ 0.09
LDHB-207ENST00000535112 TET3O43151 1660 aa15.6■□□□□ 0.09
LDHB-207ENST00000535112 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
LDHB-207ENST00000535112 ITGAEP38570 1179 aa15.6■□□□□ 0.09
LDHB-207ENST00000535112 IQGAP3Q86VI3 1631 aa15.6■□□□□ 0.09
LDHB-207ENST00000535112 POLR1AO95602 1720 aaPredicted RBP15.59■□□□□ 0.09
LDHB-207ENST00000535112 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
LDHB-207ENST00000535112 E9PCH4 1651 aa15.57■□□□□ 0.08
LDHB-207ENST00000535112 A2ML1A8K2U0 1454 aa15.56■□□□□ 0.08
LDHB-207ENST00000535112 UBR1Q8IWV7 1749 aa15.56■□□□□ 0.08
LDHB-207ENST00000535112 SYNMO15061 1565 aa15.55■□□□□ 0.08
LDHB-207ENST00000535112 TNRQ92752 1358 aa15.55■□□□□ 0.08
LDHB-207ENST00000535112 FBXO31Q5XUX0 539 aaPredicted RBP15.55■□□□□ 0.08
LDHB-207ENST00000535112 ARHGAP31Q2M1Z3 1444 aa15.54■□□□□ 0.08
LDHB-207ENST00000535112 KANK1Q14678 1352 aa15.54■□□□□ 0.08
LDHB-207ENST00000535112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDHB-207ENST00000535112 MYO5BQ9ULV0 1848 aa15.54■□□□□ 0.08
LDHB-207ENST00000535112 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
LDHB-207ENST00000535112 NLRP1Q9C000 1473 aa15.52■□□□□ 0.07
LDHB-207ENST00000535112 NAIPQ13075 1403 aa15.51■□□□□ 0.07
LDHB-207ENST00000535112 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
LDHB-207ENST00000535112 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
LDHB-207ENST00000535112 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
LDHB-207ENST00000535112 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
LDHB-207ENST00000535112 KDM5AP29375 1690 aaKnown RBP15.49■□□□□ 0.07
LDHB-207ENST00000535112 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
LDHB-207ENST00000535112 RPRD2Q5VT52 1461 aaKnown RBP15.47■□□□□ 0.07
LDHB-207ENST00000535112 NOS1P29475 1434 aa15.46■□□□□ 0.07
LDHB-207ENST00000535112 ADGRB3O60242 1522 aa15.44■□□□□ 0.06
LDHB-207ENST00000535112 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
LDHB-207ENST00000535112 NUP155O75694 1391 aa15.42■□□□□ 0.06
LDHB-207ENST00000535112 PTPRTO14522 1441 aa15.41■□□□□ 0.06
LDHB-207ENST00000535112 TMEM131LA2VDJ0 1609 aa15.4■□□□□ 0.06
LDHB-207ENST00000535112 SLIT1O75093 1534 aa15.39■□□□□ 0.05
LDHB-207ENST00000535112 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
LDHB-207ENST00000535112 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
LDHB-207ENST00000535112 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
LDHB-207ENST00000535112 KIF1BO60333 1816 aa15.37■□□□□ 0.05
LDHB-207ENST00000535112 LTBP4Q8N2S1 1624 aa15.36■□□□□ 0.05
LDHB-207ENST00000535112 TRPM2O94759 1503 aa15.36■□□□□ 0.05
LDHB-207ENST00000535112 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
LDHB-207ENST00000535112 MED14O60244 1454 aa15.35■□□□□ 0.05
LDHB-207ENST00000535112 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
LDHB-207ENST00000535112 PKD2Q13563 968 aa15.33■□□□□ 0.04
LDHB-207ENST00000535112 IDI1Q13907 227 aa15.33■□□□□ 0.04
LDHB-207ENST00000535112 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
LDHB-207ENST00000535112 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
LDHB-207ENST00000535112 NPHP4O75161 1426 aaPredicted RBP15.32■□□□□ 0.04
LDHB-207ENST00000535112 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
LDHB-207ENST00000535112 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
LDHB-207ENST00000535112 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
LDHB-207ENST00000535112 RAB3GAP2Q9H2M9 1393 aa15.28■□□□□ 0.04
LDHB-207ENST00000535112 ANKLE2Q86XL3 938 aa15.28■□□□□ 0.04
LDHB-207ENST00000535112 TRIM52Q96A61 297 aa15.28■□□□□ 0.04
LDHB-207ENST00000535112 SLC52A1Q9NWF4 448 aa15.28■□□□□ 0.04
LDHB-207ENST00000535112 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
LDHB-207ENST00000535112 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
LDHB-207ENST00000535112 LTKP29376 864 aa15.26■□□□□ 0.03
LDHB-207ENST00000535112 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
LDHB-207ENST00000535112 PPLO60437 1756 aa15.26■□□□□ 0.03
LDHB-207ENST00000535112 IFT172Q9UG01 1749 aa15.25■□□□□ 0.03
LDHB-207ENST00000535112 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
LDHB-207ENST00000535112 NEXMIFQ5QGS0 1516 aa15.24■□□□□ 0.03
LDHB-207ENST00000535112 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
LDHB-207ENST00000535112 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms