RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
SF3B2-216ENST00000534765 KIDINS220Q9ULH0 1771 aa12.63□□□□□ -0.39
SF3B2-216ENST00000534765 UNC13BO14795 1591 aa12.62□□□□□ -0.39
SF3B2-216ENST00000534765 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-216ENST00000534765 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-216ENST00000534765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.395e-22■■■■■ 29.5
SF3B2-216ENST00000534765 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
SF3B2-216ENST00000534765 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
SF3B2-216ENST00000534765 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
SF3B2-216ENST00000534765 ADGRL1O94910 1474 aa12.59□□□□□ -0.39
SF3B2-216ENST00000534765 ARAP3Q8WWN8 1544 aa12.58□□□□□ -0.4
SF3B2-216ENST00000534765 E9PCH4 1651 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 MAGI2Q86UL8 1455 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
SF3B2-216ENST00000534765 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
SF3B2-216ENST00000534765 SIGLEC1Q9BZZ2 1709 aa12.56□□□□□ -0.4
SF3B2-216ENST00000534765 CD109Q6YHK3 1445 aa12.56□□□□□ -0.4
SF3B2-216ENST00000534765 MAP3K4Q9Y6R4 1608 aa12.56□□□□□ -0.4
SF3B2-216ENST00000534765 DUOX2Q9NRD8 1548 aa12.55□□□□□ -0.4
SF3B2-216ENST00000534765 DDX10Q13206 875 aaKnown RBP12.55□□□□□ -0.4
SF3B2-216ENST00000534765 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
SF3B2-216ENST00000534765 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
SF3B2-216ENST00000534765 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
SF3B2-216ENST00000534765 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
SF3B2-216ENST00000534765 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
SF3B2-216ENST00000534765 HSPA5P11021 654 aaKnown RBP12.53□□□□□ -0.4
SF3B2-216ENST00000534765 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
SF3B2-216ENST00000534765 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.41
SF3B2-216ENST00000534765 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
SF3B2-216ENST00000534765 KDM5CP41229 1560 aa12.51□□□□□ -0.41
SF3B2-216ENST00000534765 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
SF3B2-216ENST00000534765 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
SF3B2-216ENST00000534765 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
SF3B2-216ENST00000534765 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
SF3B2-216ENST00000534765 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-216ENST00000534765 CEP152O94986 1710 aa12.5□□□□□ -0.41
SF3B2-216ENST00000534765 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
SF3B2-216ENST00000534765 ZNF326Q5BKZ1 582 aaKnown RBP12.5□□□□□ -0.41
SF3B2-216ENST00000534765 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
SF3B2-216ENST00000534765 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
SF3B2-216ENST00000534765 POGZQ7Z3K3 1410 aa12.49□□□□□ -0.41
SF3B2-216ENST00000534765 VWDEQ8N2E2 1590 aa12.49□□□□□ -0.41
SF3B2-216ENST00000534765 A2MP01023 1474 aa12.49□□□□□ -0.41
SF3B2-216ENST00000534765 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
SF3B2-216ENST00000534765 YEATS2Q9ULM3 1422 aa12.49□□□□□ -0.41
SF3B2-216ENST00000534765 ATP10AO60312 1499 aa12.48□□□□□ -0.41
SF3B2-216ENST00000534765 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
SF3B2-216ENST00000534765 MSH5O43196 834 aa12.48□□□□□ -0.41
SF3B2-216ENST00000534765 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
SF3B2-216ENST00000534765 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
SF3B2-216ENST00000534765 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
SF3B2-216ENST00000534765 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
SF3B2-216ENST00000534765 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
SF3B2-216ENST00000534765 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
SF3B2-216ENST00000534765 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
SF3B2-216ENST00000534765 KIF3BO15066 747 aa12.46□□□□□ -0.41
SF3B2-216ENST00000534765 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
SF3B2-216ENST00000534765 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
SF3B2-216ENST00000534765 HECW2Q9P2P5 1572 aa12.45□□□□□ -0.42
SF3B2-216ENST00000534765 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 ZNF518AQ6AHZ1 1483 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 DCAF11Q8TEB1 546 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 SPHKAPQ2M3C7 1700 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 PRDM15P57071 1507 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-216ENST00000534765 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 UBE2Q2Q8WVN8 375 aa12.44□□□□□ -0.42
SF3B2-216ENST00000534765 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
SF3B2-216ENST00000534765 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
SF3B2-216ENST00000534765 TET3O43151 1660 aa12.41□□□□□ -0.42
SF3B2-216ENST00000534765 GLI2P10070 1586 aa12.41□□□□□ -0.42
SF3B2-216ENST00000534765 CCDC184Q52MB2 194 aa12.41□□□□□ -0.42
SF3B2-216ENST00000534765 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
SF3B2-216ENST00000534765 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.42
SF3B2-216ENST00000534765 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
SF3B2-216ENST00000534765 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
SF3B2-216ENST00000534765 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.43
SF3B2-216ENST00000534765 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
SF3B2-216ENST00000534765 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
SF3B2-216ENST00000534765 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
SF3B2-216ENST00000534765 PTPRTO14522 1441 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 TRPM2O94759 1503 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-216ENST00000534765 EFCAB6Q5THR3 1501 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 GGT6Q6P531 493 aa12.38□□□□□ -0.43
SF3B2-216ENST00000534765 NEO1Q92859 1461 aa12.37□□□□□ -0.43
SF3B2-216ENST00000534765 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
SF3B2-216ENST00000534765 USP47Q96K76 1375 aa12.36□□□□□ -0.43
SF3B2-216ENST00000534765 NPATQ14207 1427 aa12.36□□□□□ -0.43
SF3B2-216ENST00000534765 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
SF3B2-216ENST00000534765 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
SF3B2-216ENST00000534765 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
SF3B2-216ENST00000534765 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
SF3B2-216ENST00000534765 ABCC3O15438 1527 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms