RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 NPATQ14207 1427 aa19.79■□□□□ 0.76
CCS-209ENST00000534763 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
CCS-209ENST00000534763 CEBPAP49715 358 aaPredicted RBP19.79■□□□□ 0.76
CCS-209ENST00000534763 RRP7BPQ9NSQ0 103 aa19.79■□□□□ 0.76
CCS-209ENST00000534763 C3P01024 1663 aa19.78■□□□□ 0.76
CCS-209ENST00000534763 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
CCS-209ENST00000534763 KDM5DQ9BY66 1539 aa19.77■□□□□ 0.76
CCS-209ENST00000534763 ROCK1Q13464 1354 aa19.77■□□□□ 0.76
CCS-209ENST00000534763 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
CCS-209ENST00000534763 WASHC2CQ9Y4E1 1318 aa19.76■□□□□ 0.75
CCS-209ENST00000534763 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
CCS-209ENST00000534763 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
CCS-209ENST00000534763 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
CCS-209ENST00000534763 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
CCS-209ENST00000534763 ZC3H13Q5T200 1668 aaKnown RBP19.71■□□□□ 0.75
CCS-209ENST00000534763 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
CCS-209ENST00000534763 MROH1Q8NDA8 1641 aa19.71■□□□□ 0.75
CCS-209ENST00000534763 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
CCS-209ENST00000534763 PZPP20742 1482 aa19.7■□□□□ 0.74
CCS-209ENST00000534763 ABCC3O15438 1527 aa19.7■□□□□ 0.74
CCS-209ENST00000534763 SETD1BQ9UPS6 1966 aaKnown RBP19.7■□□□□ 0.74
CCS-209ENST00000534763 DEPDC5O75140 1603 aa19.69■□□□□ 0.74
CCS-209ENST00000534763 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
CCS-209ENST00000534763 KANK1Q14678 1352 aa19.66■□□□□ 0.74
CCS-209ENST00000534763 ARHGAP31Q2M1Z3 1444 aa19.65■□□□□ 0.74
CCS-209ENST00000534763 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.73
CCS-209ENST00000534763 VWDEQ8N2E2 1590 aa19.64■□□□□ 0.73
CCS-209ENST00000534763 ITGAEP38570 1179 aa19.62■□□□□ 0.73
CCS-209ENST00000534763 HSPA2P54652 639 aa19.61■□□□□ 0.73
CCS-209ENST00000534763 TNRQ92752 1358 aa19.6■□□□□ 0.73
CCS-209ENST00000534763 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
CCS-209ENST00000534763 FBXO31Q5XUX0 539 aaPredicted RBP19.59■□□□□ 0.73
CCS-209ENST00000534763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.736e-7■■■■□ 22.3
CCS-209ENST00000534763 MYO3AQ8NEV4 1616 aa19.58■□□□□ 0.73
CCS-209ENST00000534763 SPATA31D1Q6ZQQ2 1576 aa19.58■□□□□ 0.73
CCS-209ENST00000534763 ZNF142P52746 1687 aaPredicted RBP19.58■□□□□ 0.72
CCS-209ENST00000534763 NLRP1Q9C000 1473 aa19.57■□□□□ 0.72
CCS-209ENST00000534763 UNC13BO14795 1591 aa19.57■□□□□ 0.72
CCS-209ENST00000534763 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
CCS-209ENST00000534763 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
CCS-209ENST00000534763 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
CCS-209ENST00000534763 CEP152O94986 1710 aa19.56■□□□□ 0.72
CCS-209ENST00000534763 HFM1A2PYH4 1435 aa19.53■□□□□ 0.72
CCS-209ENST00000534763 NAIPQ13075 1403 aa19.53■□□□□ 0.72
CCS-209ENST00000534763 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
CCS-209ENST00000534763 PLA2R1Q13018 1463 aa19.53■□□□□ 0.72
CCS-209ENST00000534763 RPRD2Q5VT52 1461 aaKnown RBP19.53■□□□□ 0.72
CCS-209ENST00000534763 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
CCS-209ENST00000534763 IQGAP3Q86VI3 1631 aa19.48■□□□□ 0.71
CCS-209ENST00000534763 PKD2Q13563 968 aa19.48■□□□□ 0.71
CCS-209ENST00000534763 THEMISQ8N1K5 641 aaPredicted RBP19.48■□□□□ 0.71
CCS-209ENST00000534763 TET3O43151 1660 aa19.48■□□□□ 0.71
CCS-209ENST00000534763 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
CCS-209ENST00000534763 NOS1P29475 1434 aa19.48■□□□□ 0.71
CCS-209ENST00000534763 NUP155O75694 1391 aa19.47■□□□□ 0.71
CCS-209ENST00000534763 PTPRTO14522 1441 aa19.47■□□□□ 0.71
CCS-209ENST00000534763 STRCQ7RTU9 1775 aa19.47■□□□□ 0.71
CCS-209ENST00000534763 UGGT1Q9NYU2 1555 aa19.45■□□□□ 0.7
CCS-209ENST00000534763 SLC52A1Q9NWF4 448 aa19.44■□□□□ 0.7
CCS-209ENST00000534763 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
CCS-209ENST00000534763 SYNMO15061 1565 aa19.4■□□□□ 0.7
CCS-209ENST00000534763 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
CCS-209ENST00000534763 IDI1Q13907 227 aa19.38■□□□□ 0.69
CCS-209ENST00000534763 ANKLE2Q86XL3 938 aa19.38■□□□□ 0.69
CCS-209ENST00000534763 NCKAP5LQ9HCH0 1330 aa19.38■□□□□ 0.69
CCS-209ENST00000534763 UBR1Q8IWV7 1749 aa19.37■□□□□ 0.69
CCS-209ENST00000534763 E9PCH4 1651 aa19.36■□□□□ 0.69
CCS-209ENST00000534763 SLIT1O75093 1534 aa19.35■□□□□ 0.69
CCS-209ENST00000534763 MED14O60244 1454 aa19.35■□□□□ 0.69
CCS-209ENST00000534763 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
CCS-209ENST00000534763 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
CCS-209ENST00000534763 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.69
CCS-209ENST00000534763 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
CCS-209ENST00000534763 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
CCS-209ENST00000534763 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
CCS-209ENST00000534763 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
CCS-209ENST00000534763 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
CCS-209ENST00000534763 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
CCS-209ENST00000534763 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
CCS-209ENST00000534763 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
CCS-209ENST00000534763 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
CCS-209ENST00000534763 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
CCS-209ENST00000534763 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
CCS-209ENST00000534763 HRCP23327 699 aa19.27■□□□□ 0.68
CCS-209ENST00000534763 TXNDC2Q86VQ3 553 aa19.27■□□□□ 0.68
CCS-209ENST00000534763 TMEM131LA2VDJ0 1609 aa19.25■□□□□ 0.67
CCS-209ENST00000534763 LTKP29376 864 aa19.25■□□□□ 0.67
CCS-209ENST00000534763 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
CCS-209ENST00000534763 TRPM2O94759 1503 aa19.25■□□□□ 0.67
CCS-209ENST00000534763 SPHKAPQ2M3C7 1700 aa19.24■□□□□ 0.67
CCS-209ENST00000534763 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
CCS-209ENST00000534763 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
CCS-209ENST00000534763 IQGAP1P46940 1657 aa19.23■□□□□ 0.67
CCS-209ENST00000534763 RAB3GAP2Q9H2M9 1393 aa19.22■□□□□ 0.67
CCS-209ENST00000534763 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
CCS-209ENST00000534763 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
CCS-209ENST00000534763 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
CCS-209ENST00000534763 IQSEC2Q5JU85 1478 aa19.2■□□□□ 0.66
CCS-209ENST00000534763 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
CCS-209ENST00000534763 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms